Special

ENSMUSG00000054808 @ mm10

Biotype
protein_coding
Gene Symbol
Actn4
Description
actinin alpha 4 [Source:MGI Symbol;Acc:MGI:1890773]
Coordinates
chr7:28893248-28962340:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
93.27
87.49
0
Alternative 5'ss
210
chr7:28894911-28895120
-
6.73
87.49
0
Exon Skipping
87
chr7:28916160-28916246
-
99.97
1.79
3
Exon Skipping
81
chr7:28895432-28895512
-
88.22
87.58
0
Exon Skipping
66
chr7:28895121-28895186
-
11.21
83.43
0
Exon Skipping
86
chr7:28911490-28911575
-
83.48
95.83
5
Exon Skipping
86
chr7:28909903-28909988
-
17.18
97.44
2
Exon Skipping
120
chr7:28918672-28918791
-
99.96
1.45
3
Exon Skipping
88
chr7:28915213-28915300
-
99.94
1.51
3
Exon Skipping
79
chr7:28913378-28913456
-
99.99
0.45
3
Exon Skipping
82
chr7:28912240-28912321
-
99.99
2
3
Exon Skipping
93
chr7:28906972-28907064
-
100
0.23
3
Exon Skipping
231
chr7:28905225-28905455
-
99.99
0.38
3
Exon Skipping
148
chr7:28904541-28904688
-
100
0.25
3
Exon Skipping
151
chr7:28901877-28902027
-
99.68
19.78
3
Intron Retention
664
chr7:28911576-28912239
-
4.98
49.65
0
Intron Retention
4425
chr7:28907065-28911489
-
4.85
46.57
0
Intron Retention
576
chr7:28895513-28896088
-
5.58
60.92
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000130402 ACTN4 1-to-1
Human hg19 ENSG00000130402 ACTN4 1-to-1
Rat rn6 ENSRNOG00000020433 Actn4 1-to-1
Cow bosTau6 ENSBTAG00000011215 ACTN4 1-to-1
Chicken galGal4 ENSGALG00000014305 ACTN4 1-to-1
Chicken galGal3 ENSGALG00000014305 1-to-1
Zebrafish danRer10 ENSDARG00000099786 ACTN4 1-to-1
Fruitfly dm6 FBgn0000667 Actn 4-to-1