Special

ENSG00000130402 @ hg38

Biotype
protein_coding
Gene Symbol
ACTN4
Description
actinin alpha 4 [Source:HGNC Symbol;Acc:HGNC:166]
Coordinates
chr19:38647649-38731583:+
Assembly
hg38
Other assemblies
hg19

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
96.26
55.26
0
Alternative 5'ss
177
chr19:38728382-38728558
+
3.74
55.26
0
Exon Skipping
86
chr19:38710257-38710342
+
75.12
97.93
5
Exon Skipping
86
chr19:38711276-38711361
+
26.33
99.67
2
Exon Skipping
81
chr19:38727946-38728026
+
81.16
68.57
0
Exon Skipping
231
chr19:38717086-38717316
+
99.98
0.57
3
Exon Skipping
151
chr19:38721538-38721688
+
99.98
0.28
3
Exon Skipping
148
chr19:38717927-38718074
+
99.73
4.47
3
Exon Skipping
82
chr19:38709395-38709476
+
99.99
0.17
3
Exon Skipping
79
chr19:38708117-38708195
+
99.97
0.46
3
Exon Skipping
88
chr19:38706044-38706131
+
99.88
1.94
3
Exon Skipping
87
chr19:38704934-38705020
+
99.88
1.72
3
Exon Skipping
120
chr19:38701002-38701121
+
99.98
0.54
3
Exon Skipping
93
chr19:38714469-38714561
+
100
0.41
3
Intron Retention
610
chr19:38717317-38717926
+
1.85
100
0
Intron Retention
780
chr19:38709477-38710256
+
7.12
57.47
0
Intron Retention
4126
chr19:38710343-38714468
+
8.96
48.63
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000054808 Actn4 1-to-1
Mouse mm9 ENSMUSG00000054808 Actn4 1-to-1
Rat rn6 ENSRNOG00000020433 Actn4 1-to-1
Cow bosTau6 ENSBTAG00000011215 ACTN4 1-to-1
Chicken galGal4 ENSGALG00000014305 ACTN4 1-to-1
Chicken galGal3 ENSGALG00000014305 1-to-1
Zebrafish danRer10 ENSDARG00000099786 ACTN4 1-to-1
Fruitfly dm6 FBgn0000667 Actn 4-to-1
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