Special

ENSG00000139219 @ hg19

Biotype
protein_coding
Gene Symbol
COL2A1
Description
collagen, type II, alpha 1 [Source:HGNC Symbol;Acc:2200]
Coordinates
chr12:48366748-48398285:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
207
chr12:48393702-48393908
-
94.69
22.1
7
Intron Retention
297
chr12:48381097-48381393
-
3.33
28.57
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000022483 Col2a1 1-to-1
Mouse mm9 ENSMUSG00000022483 Col2a1 1-to-1
Rat rn6 ENSRNOG00000058560 Col2a1 1-to-1
Cow bosTau6 ENSBTAG00000013155 COL2A1 1-to-1
Chicken galGal4 ENSGALG00000013587 COL2A1 1-to-1
Chicken galGal3 ENSGALG00000013587 COL2A1 1-to-1
Zebrafish danRer10 ENSDARG00000011407 col2a1b 1-to-2
Zebrafish danRer10 ENSDARG00000069093 col2a1a 1-to-2
Fruitfly dm6 FBgn0000299 Cg25C 17-to-2
Fruitfly dm6 FBgn0016075 vkg 17-to-2