Special

ENSMUSG00000022483 @ mm10

Biotype
protein_coding
Gene Symbol
Col2a1
Description
collagen, type II, alpha 1 [Source:MGI Symbol;Acc:MGI:88452]
Coordinates
chr15:97975602-98004695:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
16
chr15:97999651-97999666
-
9.3
59.69
0
Exon Skipping
204
chr15:98000403-98000606
-
76.01
99.71
7
Intron Retention
290
chr15:97995070-97995359
-
10.62
82.93
0
Intron Retention
279
chr15:97994589-97994867
-
8.6
55.22
0
Intron Retention
619
chr15:97996693-97997311
-
6.33
84.23
0
Intron Retention
1111
chr15:97999292-98000402
-
4.75
25.94
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000139219 COL2A1 1-to-1
Human hg19 ENSG00000139219 COL2A1 1-to-1
Rat rn6 ENSRNOG00000058560 Col2a1 1-to-1
Cow bosTau6 ENSBTAG00000013155 COL2A1 1-to-1
Chicken galGal4 ENSGALG00000013587 COL2A1 1-to-1
Chicken galGal3 ENSGALG00000013587 COL2A1 1-to-1
Zebrafish danRer10 ENSDARG00000011407 col2a1b 1-to-2
Zebrafish danRer10 ENSDARG00000069093 col2a1a 1-to-2
Fruitfly dm6 FBgn0000299 Cg25C 17-to-2
Fruitfly dm6 FBgn0016075 vkg 17-to-2