Special

ENSG00000143379 @ hg19

Biotype
protein_coding
Gene Symbol
SETDB1
Description
SET domain, bifurcated 1 [Source:HGNC Symbol;Acc:10761]
Coordinates
chr1:150898767-150937220:+
Assembly
hg19
Other assemblies
hg38

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
91.25
28.36
0
Alternative 5'ss
46
chr1:150898994-150899039
+
5.9
24.93
0
Exon Skipping
202
chr1:150915328-150915529
+
97.23
27.45
0
Intron Retention
274
chr1:150923567-150923840
+
10.71
36.67
0
Intron Retention
938
chr1:150933668-150934605
+
24.36
56.68
0
Intron Retention
428
chr1:150934635-150935062
+
13.83
66.21
0
Intron Retention
254
chr1:150935196-150935449
+
18.13
67.56
0
Intron Retention
390
chr1:150935616-150936005
+
19.08
55.75
0
Intron Retention
253
chr1:150936218-150936470
+
10.6
54.72
0
Intron Retention
163
chr1:150915165-150915327
+
11.87
33.4
0
Intron Retention
924
chr1:150916470-150917393
+
11.04
30.68
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000015697 Setdb1 1-to-1
Mouse mm9 ENSMUSG00000015697 Setdb1 1-to-1
Rat rn6 ENSRNOG00000021143 Setdb1 1-to-1
Cow bosTau6 ENSBTAG00000000098 SETDB1 1-to-1
Chicken galGal4 ENSGALG00000024051 1-to-2
Chicken galGal4 ENSGALG00000029138 1-to-2
Chicken galGal3 ENSGALG00000024051 1-to-2
Zebrafish danRer10 ENSDARG00000099021 setdb1b 1-to-1
Fruitfly dm6 FBgn0086908 egg 1-to-1
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