Special

ENSG00000143379 @ hg38

Biotype
protein_coding
Gene Symbol
SETDB1
Description
SET domain bifurcated 1 [Source:HGNC Symbol;Acc:HGNC:10761]
Coordinates
chr1:150926263-150964744:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
28.36
35.73
0
Alternative 3'ss
3
chr1:150949367-150949369
+
71.64
35.73
0
Exon Skipping
29
chr1:150962130-150962158
+
98.29
40.36
0
Exon Skipping
35
chr1:150939940-150939974
+
99.06
100
0
Intron Retention
274
chr1:150951091-150951364
+
10.21
46.93
0
Intron Retention
1215
chr1:150959348-150960562
+
19.56
57.53
0
Intron Retention
938
chr1:150961192-150962129
+
20.12
78.4
0
Intron Retention
428
chr1:150962159-150962586
+
12.37
65.61
0
Intron Retention
254
chr1:150962720-150962973
+
16.41
71.1
0
Intron Retention
390
chr1:150963140-150963529
+
16.56
57.08
0
Intron Retention
253
chr1:150963742-150963994
+
9.95
54.72
0
Intron Retention
163
chr1:150964084-150964246
+
9.89
64.91
0
Intron Retention
163
chr1:150942689-150942851
+
10.63
33.2
0
Intron Retention
866
chr1:150943054-150943919
+
11.45
31.08
0
Intron Retention
924
chr1:150943994-150944917
+
10.95
34.37
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000015697 Setdb1 1-to-1
Mouse mm9 ENSMUSG00000015697 Setdb1 1-to-1
Rat rn6 ENSRNOG00000021143 Setdb1 1-to-1
Cow bosTau6 ENSBTAG00000000098 SETDB1 1-to-1
Chicken galGal4 ENSGALG00000024051 1-to-2
Chicken galGal4 ENSGALG00000029138 1-to-2
Chicken galGal3 ENSGALG00000024051 1-to-2
Zebrafish danRer10 ENSDARG00000099021 setdb1b 1-to-1
Fruitfly dm6 FBgn0086908 egg 1-to-1