Special

ENSBTAG00000000098 @ bosTau6

Biotype
protein_coding
Gene Symbol
SETDB1
Description
SET domain, bifurcated 1 [Source:HGNC Symbol;Acc:HGNC:10761]
Coordinates
chr3:19844271-19875888:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
20
chr3:19875864-19875883
-
20.51
39.21
0
Alternative 5'ss
79
chr3:19875805-19875883
-
75.71
40.81
0
Intron Retention
897
chr3:19874908-19875804
-
16.01
40.62
0
Intron Retention
86
chr3:19855350-19855435
-
8.44
20.4
0
Intron Retention
348
chr3:19845123-19845470
-
25.48
48.17
0
Intron Retention
258
chr3:19844653-19844910
-
15.01
25.21
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000143379 SETDB1 1-to-1
Human hg19 ENSG00000143379 SETDB1 1-to-1
Mouse mm10 ENSMUSG00000015697 Setdb1 1-to-1
Mouse mm9 ENSMUSG00000015697 Setdb1 1-to-1
Rat rn6 ENSRNOG00000021143 Setdb1 1-to-1
Chicken galGal4 ENSGALG00000024051 1-to-2
Chicken galGal4 ENSGALG00000029138 1-to-2
Chicken galGal3 ENSGALG00000024051 1-to-2
Zebrafish danRer10 ENSDARG00000099021 setdb1b 1-to-1
Fruitfly dm6 FBgn0086908 egg 1-to-1