Special

ENSG00000144283 @ hg38

Biotype
protein_coding
Gene Symbol
PKP4
Description
plakophilin 4 [Source:HGNC Symbol;Acc:HGNC:9026]
Coordinates
chr2:158456964-158682879:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
28.26
56.63
0
Alternative 3'ss
3
chr2:158634070-158634072
+
71.74
56.63
0
Alternative 5'ss
0
NA
+
38.45
99.51
0
Alternative 5'ss
6
chr2:158621116-158621121
+
61.55
99.51
0
Exon Skipping
129
chr2:158676739-158676867
+
80.31
72.03
0
Exon Skipping
74
chr2:158678581-158678654
+
88.76
40.53
0
Exon Skipping
550
chr2:158624878-158625427
+
96.33
41.1
0
Exon Skipping
97
chr2:158533438-158533534
+
4.88
63.88
1
Exon Skipping
113
chr2:158577271-158577383
+
90.29
27.52
0
Exon Skipping
82
chr2:158678199-158678280
+
5.73
38.23
0
Exon Skipping
152
chr2:158669151-158669302
+
4.23
82.68
0
Exon Skipping
196
chr2:158669720-158669915
+
97.71
91.42
0
Exon Skipping
114
chr2:158638755-158638868
+
2.79
10.64
0
Exon Skipping
133
chr2:158640627-158640759
+
70.92
47.84
0
Intron Retention
3156
chr2:158666564-158669719
+
13.17
87.88
0
Intron Retention
6325
chr2:158625428-158631752
+
4.89
67.67
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000026991 Pkp4 1-to-1
Mouse mm9 ENSMUSG00000026991 Pkp4 1-to-1
Rat rn6 ENSRNOG00000005504 Pkp4 1-to-1
Cow bosTau6 ENSBTAG00000013773 PKP4 1-to-1
Chicken galGal4 ENSGALG00000013001 1-to-2
Chicken galGal4 ENSGALG00000014502 1-to-2
Chicken galGal3 ENSGALG00000012561 PKP4 1-to-1
Chicken galGal3 ENSGALG00000013001 CTNND2 1-to-2
Chicken galGal3 ENSGALG00000014502 1-to-2
Zebrafish danRer10 ENSDARG00000045331 pkp4 1-to-1
Fruitfly dm6 FBgn0260799 p120ctn 7-to-1