Special

ENSMUSG00000026991 @ mm9

Biotype
protein_coding
Gene Symbol
Pkp4
Description
plakophilin 4 [Source:MGI Symbol;Acc:MGI:109281]
Coordinates
chr2:58998907-59193265:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
5
chr2:59146142-59146146
+
10.25
67
0
Alternative 3'ss
82
chr2:59146065-59146146
+
87.27
78
0
Alternative 5'ss
0
NA
+
33.3
91.9
0
Alternative 5'ss
6
chr2:59143249-59143254
+
66.7
91.9
0
Exon Skipping
137
chr2:59052735-59052871
+
93.98
20.02
0
Exon Skipping
97
chr2:59052991-59053087
+
9.32
63.92
1
Exon Skipping
113
chr2:59104445-59104557
+
88.22
31.58
0
Exon Skipping
35
chr2:59127275-59127309
+
91.7
30
0
Exon Skipping
129
chr2:59188551-59188679
+
47.68
99.35
0
Exon Skipping
74
chr2:59190319-59190392
+
92.04
70.29
0
Exon Skipping
48
chr2:59152413-59152460
+
9.99
81.37
0
Intron Retention
4220
chr2:59186099-59190318
+
7.87
56.44
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000144283 PKP4 1-to-1
Human hg19 ENSG00000144283 PK4P 1-to-1
Rat rn6 ENSRNOG00000005504 Pkp4 1-to-1
Cow bosTau6 ENSBTAG00000013773 PKP4 1-to-1
Chicken galGal4 ENSGALG00000012561 PKP4 1-to-1
Chicken galGal3 ENSGALG00000012561 PKP4 1-to-1
Zebrafish danRer10 ENSDARG00000045331 pkp4 1-to-1
Fruitfly dm6 FBgn0260799 p120ctn 8-to-1