Special

ENSG00000154265 @ hg38

Biotype
protein_coding
Gene Symbol
ABCA5
Description
ATP binding cassette subfamily A member 5 [Source:HGNC Symbol;Acc:HGNC:35]
Coordinates
chr17:69244311-69327244:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
77.95
68.36
0
Alternative 5'ss
16
chr17:69273943-69273958
-
22.05
68.36
0
Exon Skipping
184
chr17:69288515-69288698
-
2.09
40.26
0
Exon Skipping
262
chr17:69310765-69311026
-
3.77
41.86
0
Exon Skipping
120
chr17:69251747-69251866
-
76.95
94.34
0
Exon Skipping
33
chr17:69285388-69285420
-
13.92
44.24
0
Exon Skipping
119
chr17:69325699-69325817
-
63.71
81.89
0
Exon Skipping
119
chr17:69317705-69317823
-
11.19
60.57
0
Exon Skipping
127
chr17:69323739-69323865
-
4.82
35.06
0
Exon Skipping
186
chr17:69317047-69317232
-
2.83
25.23
0
Intron Retention
2556
chr17:69268057-69270612
-
8.36
53.56
0
Intron Retention
1706
chr17:69251867-69253572
-
9.26
32.71
0
Intron Retention
1125
chr17:69250622-69251746
-
16.52
55
0
Intron Retention
1587
chr17:69248318-69249904
-
9.87
54.1
0
Intron Retention
12621
chr17:69314431-69327051
-
47.86
96.39
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000018800 Abca5 1-to-1
Mouse mm9 ENSMUSG00000018800 Abca5 1-to-1
Rat rn6 ENSRNOG00000004378 Abca5 1-to-1
Cow bosTau6 ENSBTAG00000002747 ABCA5 1-to-1
Chicken galGal4 ENSGALG00000004333 ABCA5 1-to-1
Chicken galGal3 ENSGALG00000004333 E1BY40_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000074041 abca5 1-to-1