Special

ENSG00000172006 @ hg38

Biotype
protein_coding
Gene Symbol
ZNF554
Description
zinc finger protein 554 [Source:HGNC Symbol;Acc:HGNC:26629]
Coordinates
chr19:2819874-2835773:+
Assembly
hg38
Other assemblies
hg19

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
91.71
75.95
0
Alternative 5'ss
5
chr19:2827744-2827748
+
8.29
75.95
0
Exon Skipping
107
chr19:2833163-2833269
+
7.27
59.66
0
Exon Skipping
97
chr19:2826250-2826346
+
3.82
28.67
0
Exon Skipping
136
chr19:2830340-2830475
+
6.15
35.9
0
Exon Skipping
92
chr19:2823511-2823602
+
13.29
44.82
0
Intron Retention
4504
chr19:2823113-2827616
+
18.1
42.22
0
Intron Retention
4559
chr19:2827744-2832302
+
30
64.56
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Cow bosTau6 ENSBTAG00000031352 ZNF554 1-to-1
Fruitfly dm6 FBgn0037698 CG16779 2-to-1
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