Special

ENSG00000177943 @ hg38

Biotype
protein_coding
Gene Symbol
MAMDC4
Description
MAM domain containing 4 [Source:HGNC Symbol;Acc:HGNC:24083]
Coordinates
chr9:136850943-136860799:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
40
chr9:136853102-136853141
+
58.42
58.3
0
Alternative 3'ss
43
chr9:136853099-136853141
+
38.43
58.3
0
Exon Skipping
91
chr9:136858186-136858276
+
94.85
24.7
0
Exon Skipping
135
chr9:136858719-136858853
+
92.03
33.83
0
Exon Skipping
128
chr9:136859005-136859132
+
94.39
26.32
0
Exon Skipping
125
chr9:136856257-136856381
+
82.4
59.61
0
Exon Skipping
112
chr9:136856464-136856575
+
85.65
59.61
0
Exon Skipping
117
chr9:136856710-136856826
+
99.08
33.66
0
Intron Retention
143
chr9:136855111-136855253
+
35.66
92.54
0
Intron Retention
92
chr9:136855339-136855430
+
19.99
73.55
0
Intron Retention
112
chr9:136855620-136855731
+
28.84
97.29
0
Intron Retention
169
chr9:136855849-136856017
+
19.57
91.25
0
Intron Retention
80
chr9:136856827-136856906
+
9.07
77.86
0
Intron Retention
123
chr9:136857042-136857164
+
12.94
100
0
Intron Retention
68
chr9:136857299-136857366
+
29.27
97.38
0
Intron Retention
72
chr9:136857587-136857658
+
21.29
84.23
0
Intron Retention
182
chr9:136857797-136857978
+
15.59
100
0
Intron Retention
75
chr9:136853210-136853284
+
39.75
94.62
0
Intron Retention
302
chr9:136858098-136858399
+
75.86
72.22
0
Intron Retention
172
chr9:136858547-136858718
+
29.63
98.99
0
Intron Retention
151
chr9:136858854-136859004
+
35.74
98.46
0
Intron Retention
76
chr9:136859133-136859208
+
33.24
98.06
0
Intron Retention
568
chr9:136859318-136859885
+
42.08
93.2
0
Intron Retention
497
chr9:136860065-136860561
+
16.41
100
0
Intron Retention
84
chr9:136853908-136853991
+
20.97
67.55
0
Intron Retention
134
chr9:136854077-136854210
+
19.38
72.26
0
Intron Retention
202
chr9:136854337-136854538
+
12.56
90.91
0
Intron Retention
751
chr9:136851106-136851856
+
24.99
82.26
0
Intron Retention
439
chr9:136851940-136852378
+
30.53
97.39
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000026941 Mamdc4 1-to-1
Mouse mm9 ENSMUSG00000026941 Mamdc4 1-to-1
Rat rn6 ENSRNOG00000016584 Mamdc4 1-to-1
Cow bosTau6 ENSBTAG00000021550 MAMDC4 1-to-1
Chicken galGal4 ENSGALG00000008995 MAMDC4 1-to-1
Chicken galGal3 ENSGALG00000008995 MAMDC4 1-to-1
Zebrafish danRer10 ENSDARG00000087633 MAMDC4 1-to-1