Special

ENSMUSG00000026941 @ mm10

Biotype
protein_coding
Gene Symbol
Mamdc4
Description
MAM domain containing 4 [Source:MGI Symbol;Acc:MGI:2685841]
Coordinates
chr2:25563115-25574845:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
97.23
54.29
0
Alternative 3'ss
20
chr2:25563708-25563727
-
2.77
54.29
0
Alternative 5'ss
0
NA
-
24.53
39.49
0
Alternative 5'ss
29
chr2:25564576-25564604
-
75.47
39.49
0
Exon Skipping
147
chr2:25564825-25564971
-
90.86
64.08
0
Exon Skipping
112
chr2:25566712-25566823
-
91.13
21.54
0
Intron Retention
241
chr2:25567944-25568184
-
58.58
60.59
0
Intron Retention
84
chr2:25567775-25567858
-
18.2
94.87
0
Intron Retention
104
chr2:25567482-25567585
-
66.13
67.78
0
Intron Retention
94
chr2:25567259-25567352
-
24.32
90.72
0
Intron Retention
98
chr2:25567029-25567126
-
15.94
92.91
0
Intron Retention
80
chr2:25566824-25566903
-
73.34
53.18
0
Intron Retention
71
chr2:25566381-25566451
-
42.27
78.03
0
Intron Retention
89
chr2:25566157-25566245
-
16.13
85.13
0
Intron Retention
76
chr2:25570081-25570156
-
64.99
73.4
0
Intron Retention
89
chr2:25565622-25565710
-
12.02
67.88
0
Intron Retention
85
chr2:25565399-25565483
-
20.49
93.18
0
Intron Retention
93
chr2:25565187-25565279
-
11.73
72.41
0
Intron Retention
124
chr2:25564972-25565095
-
23.11
76.59
0
Intron Retention
114
chr2:25564711-25564824
-
20.38
86.49
0
Intron Retention
96
chr2:25564480-25564575
-
48.55
100
0
Intron Retention
77
chr2:25564275-25564351
-
39.2
100
0
Intron Retention
458
chr2:25563708-25564165
-
41.48
95.08
0
Intron Retention
162
chr2:25563370-25563531
-
36.35
96.33
0
Intron Retention
87
chr2:25569820-25569906
-
73.82
92.31
0
Intron Retention
177
chr2:25569517-25569693
-
72.24
25.84
0
Intron Retention
72
chr2:25569314-25569385
-
43.25
83.82
0
Intron Retention
144
chr2:25569085-25569228
-
51.44
44.23
0
Intron Retention
191
chr2:25568768-25568958
-
89.7
23.73
0
Intron Retention
83
chr2:25568547-25568629
-
56.19
70.93
0
Intron Retention
99
chr2:25568359-25568457
-
41.65
93.57
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000177943 MAMDC4 1-to-1
Human hg19 ENSG00000177943 MAMDC4 1-to-1
Rat rn6 ENSRNOG00000016584 Mamdc4 1-to-1
Cow bosTau6 ENSBTAG00000021550 MAMDC4 1-to-1
Chicken galGal4 ENSGALG00000008995 MAMDC4 1-to-1
Chicken galGal3 ENSGALG00000008995 MAMDC4 1-to-1
Zebrafish danRer10 ENSDARG00000087633 MAMDC4 1-to-1