Special

ENSG00000198569 @ hg38

Biotype
protein_coding
Gene Symbol
SLC34A3
Description
solute carrier family 34 member 3 [Source:HGNC Symbol;Acc:HGNC:20305]
Coordinates
chr9:137230757-137236554:+
Assembly
hg38
Other assemblies
hg19

GENOMIC BROWSER[edit]

EXPRESSION VALUES[edit]

SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
77.72
21.92
0
Alternative 3'ss
3
chr9:137231661-137231663
+
22.28
21.92
0
Alternative 5'ss
0
NA
+
61.37
48.62
0
Alternative 5'ss
141
chr9:137230939-137231079
+
38.63
48.62
0
Intron Retention
139
chr9:137234277-137234415
+
36.34
100
0
Intron Retention
74
chr9:137234533-137234606
+
19.88
86.56
0
Intron Retention
1220
chr9:137234732-137235951
+
39.99
91.41
0
Intron Retention
284
chr9:137231788-137232071
+
52.91
98.41
0
Intron Retention
413
chr9:137232162-137232574
+
42.69
94.44
0
Intron Retention
80
chr9:137232704-137232783
+
50.75
95.83
0
Intron Retention
93
chr9:137233116-137233208
+
19.39
91.69
0
Intron Retention
228
chr9:137233405-137233632
+
17.48
92.5
0
Intron Retention
140
chr9:137233723-137233862
+
38.27
99.67
0
Intron Retention
584
chr9:137231080-137231663
+
44.85
86.49
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000006469 Slc34a3 1-to-1
Mouse mm9 ENSMUSG00000006469 Slc34a3 1-to-1
Rat rn6 ENSRNOG00000010451 Slc34a3 1-to-1
Cow bosTau6 ENSBTAG00000046379 SLC34A3 1-to-1
Retrieved from "https://vastdb.crg.eu/wiki/Special:VastDB"