Special

ENSMUSG00000000325 @ mm10

Biotype
protein_coding
Gene Symbol
Arvcf
Description
armadillo repeat gene deleted in velo-cardio-facial syndrome [Source:MGI Symbol;Acc:MGI:109620]
Coordinates
chr16:18348182-18407076:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
4.23
100
0
Alternative 3'ss
43
chr16:18403628-18403670
+
95.35
100
0
Exon Skipping
120
chr16:18405102-18405221
+
81.21
79.45
0
Exon Skipping
18
chr16:18400781-18400798
+
16.69
93.94
1
Intron Retention
103
chr16:18403525-18403627
+
10.38
100
0
Intron Retention
213
chr16:18403922-18404134
+
11.57
100
0
Intron Retention
556
chr16:18404546-18405101
+
11.83
34.43
0
Intron Retention
385
chr16:18405222-18405606
+
22.52
94.91
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000099889 ARVCF 1-to-1
Human hg19 ENSG00000099889 ARVCF 1-to-1
Rat rn6 ENSRNOG00000001888 Arvcf 1-to-1
Cow bosTau6 ENSBTAG00000002411 CTNND1 3-to-1
Chicken galGal4 ENSGALG00000002040 ARVCF 1-to-1
Chicken galGal3 ENSGALG00000002040 ARVCF 1-to-1
Zebrafish danRer10 ENSDARG00000061688 arvcfb 1-to-2
Zebrafish danRer10 ENSDARG00000074329 arvcfa 1-to-2
Fruitfly dm6 FBgn0260799 p120ctn 8-to-1