Special

ENSBTAG00000002411 @ bosTau6

Biotype
protein_coding
Gene Symbol
CTNND1
Description
catenin (cadherin-associated protein), delta 1 [Source:HGNC Symbol;Acc:HGNC:2515]
Coordinates
chr15:82283934-82329276:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
18
chr15:82319170-82319187
+
14.43
67.81
1
Exon Skipping
84
chr15:82326513-82326596
+
17.96
77.12
1
Exon Skipping
137
chr15:82306389-82306525
+
16.48
29.97
0
Exon Skipping
117
chr15:82307059-82307175
+
58.89
90.79
0
Exon Skipping
267
chr15:82308357-82308623
+
54
89.34
0
Exon Skipping
72
chr15:82310536-82310607
+
94.97
16.17
0
Exon Skipping
63
chr15:82325252-82325314
+
92.11
36.45
0
Intron Retention
425
chr15:82326088-82326512
+
12.72
52.7
0
Intron Retention
261
chr15:82326597-82326857
+
16.4
37.15
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000099889 ARVCF 1-to-2
Human hg19 ENSG00000099889 ARVCF 1-to-2
Human hg19 ENSG00000198561 CTNND1 1-to-2
Mouse mm10 ENSMUSG00000000325 Arvcf 1-to-3
Mouse mm10 ENSMUSG00000034101 Ctnnd1 1-to-3
Mouse mm9 ENSMUSG00000000325 Arvcf 1-to-3
Mouse mm9 ENSMUSG00000034101 Ctnnd1 1-to-3
Rat rn6 ENSRNOG00000030790 Ctnnd1 1-to-1
Chicken galGal4 ENSGALG00000007330 CTNND1 1-to-1
Chicken galGal3 ENSGALG00000002040 ARVCF 1-to-2
Chicken galGal3 ENSGALG00000007330 Q5ZJ21_CHICK 1-to-2
Zebrafish danRer10 ENSDARG00000061688 arvcfb 1-to-2
Zebrafish danRer10 ENSDARG00000078233 ctnnd1 1-to-2
Fruitfly dm6 FBgn0260799 p120ctn 7-to-1