Special

ENSG00000198561 @ hg19

Biotype
protein_coding
Gene Symbol
CTNND1
Description
catenin (cadherin-associated protein), delta 1 [Source:HGNC Symbol;Acc:2515]
Coordinates
chr11:57529234-57586651:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
86.14
36.51
0
Alternative 5'ss
73
chr11:57529519-57529591
+
13.86
36.51
0
Exon Skipping
119
chr11:57556509-57556627
+
53.87
100
0
Exon Skipping
87
chr11:57583387-57583473
+
8.64
91.56
1
Exon Skipping
289
chr11:57558857-57559145
+
62.97
94.34
0
Exon Skipping
72
chr11:57561482-57561553
+
83.56
63.3
0
Exon Skipping
18
chr11:57573933-57573950
+
13.96
86.72
1
Intron Retention
2336
chr11:57559146-57561481
+
13.84
46.86
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000034101 Ctnnd1 1-to-1
Mouse mm9 ENSMUSG00000034101 Ctnnd1 1-to-1
Rat rn6 ENSRNOG00000030790 Ctnnd1 1-to-1
Cow bosTau6 ENSBTAG00000002411 CTNND1 2-to-1
Chicken galGal4 ENSGALG00000007330 CTNND1 1-to-1
Chicken galGal3 ENSGALG00000007330 Q5ZJ21_CHICK 1-to-1
Zebrafish danRer10 ENSDARG00000078233 ctnnd1 1-to-1
Fruitfly dm6 FBgn0260799 p120ctn 7-to-1