Special

ENSMUSG00000026867 @ mm10

Biotype
protein_coding
Gene Symbol
Gapvd1
Description
GTPase activating protein and VPS9 domains 1 [Source:MGI Symbol;Acc:MGI:1913941]
Coordinates
chr2:34674594-34755232:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
-
97.87
68.61
0
Alternative 5'ss
32
chr2:34727184-34727215
-
0.78
58.62
0
Alternative 5'ss
114
chr2:34727102-34727215
-
1.35
68.61
0
Exon Skipping
92
chr2:34752671-34752762
-
2.36
56.82
0
Exon Skipping
73
chr2:34681635-34681707
-
96.95
44.27
0
Exon Skipping
81
chr2:34722938-34723018
-
16.04
89.93
0
Exon Skipping
57
chr2:34734551-34734607
-
3.28
40.23
0
Exon Skipping
81
chr2:34699826-34699906
-
85.07
57.56
0
Exon Skipping
135
chr2:34725379-34725513
-
99.35
87.23
0
Intron Retention
2866
chr2:34712339-34715204
-
5.17
54.07
0
Intron Retention
4217
chr2:34695609-34699825
-
6.05
78.46
0
Intron Retention
3004
chr2:34678631-34681634
-
3.77
64.36
0
Intron Retention
418
chr2:34754560-34754977
-
11.83
28.16
0
Intron Retention
1985
chr2:34715331-34717315
-
15.88
100
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000165219 GAPVD1 1-to-1
Human hg19 ENSG00000165219 GAPVD1 1-to-1
Rat rn6 ENSRNOG00000017925 Gapvd1 1-to-1
Cow bosTau6 ENSBTAG00000011544 GAPVD1 1-to-1
Chicken galGal4 ENSGALG00000000993 GAPVD1 1-to-1
Chicken galGal3 ENSGALG00000000993 GAPVD1 1-to-1
Zebrafish danRer10 ENSDARG00000090183 gapvd1 1-to-1
Fruitfly dm6 FBgn0030286 CG1657 1-to-1