Special

ENSMUSG00000029475 @ mm10

Biotype
protein_coding
Gene Symbol
Kdm2b
Description
lysine (K)-specific demethylase 2B [Source:MGI Symbol;Acc:MGI:1354737]
Coordinates
chr5:122870665-122989823:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
82.86
50.46
0
Alternative 3'ss
9
chr5:122882225-122882233
-
17.11
50.46
0
Alternative 5'ss
0
NA
-
5.65
40.7
0
Alternative 5'ss
24
chr5:122921978-122922001
-
6.95
44.72
0
Alternative 5'ss
97
chr5:122921905-122922001
-
86.31
46.78
0
Exon Skipping
225
chr5:122888530-122888754
-
99.09
45.54
0
Exon Skipping
114
chr5:122881637-122881750
-
92.09
47.73
0
Exon Skipping
39
chr5:122881020-122881058
-
99.2
30.15
0
Intron Retention
1061
chr5:122987807-122988867
-
11.39
24.4
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000089094 KDM2B 1-to-1
Human hg19 ENSG00000089094 KDM2B 1-to-1
Rat rn6 ENSRNOG00000025702 Kdm2b 1-to-1
Cow bosTau6 ENSBTAG00000002328 KDM2B 1-to-1
Chicken galGal4 ENSGALG00000004225 KDM2B 1-to-1
Chicken galGal3 ENSGALG00000004225 KDM2B 1-to-1
Zebrafish danRer10 ENSDARG00000036593 kdm2ba 1-to-3
Zebrafish danRer10 ENSDARG00000046010 kdm2bb 1-to-3
Zebrafish danRer10 ENSDARG00000100575 KDM2B (2 of 2) 1-to-3
Fruitfly dm6 FBgn0037659 Kdm2 3-to-1