Special

ENSMUSG00000029516 @ mm9

Biotype
protein_coding
Gene Symbol
Cit
Description
citron [Source:MGI Symbol;Acc:MGI:105313]
Coordinates
chr5:116295287-116458956:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
61.34
72.26
0
Alternative 3'ss
63
chr5:116296293-116296355
+
38.66
72.26
0
Alternative 3'ss
0
NA
+
87.25
29.09
0
Alternative 3'ss
27
chr5:116418946-116418972
+
12.75
29.09
0
Alternative 3'ss
0
NA
+
81.98
42.11
0
Alternative 3'ss
45
chr5:116431659-116431703
+
18.02
42.11
0
Alternative 3'ss
0
NA
+
58.15
46.63
0
Alternative 3'ss
3
chr5:116455791-116455793
+
41.85
46.63
0
Alternative 5'ss
0
NA
+
62
67.9
0
Alternative 5'ss
22
chr5:116295311-116295332
+
38
67.9
0
Exon Skipping
184
chr5:116358647-116358830
+
96.22
28.43
0
Exon Skipping
126
chr5:116388688-116388813
+
96.69
32.79
0
Exon Skipping
45
chr5:116437697-116437741
+
32.07
88.89
0
Intron Retention
959
chr5:116375509-116376467
+
14.58
55.16
0
Intron Retention
1233
chr5:116376612-116377844
+
9.96
35.17
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000122966 CIT 1-to-1
Human hg19 ENSG00000122966 CIT 1-to-1
Rat rn6 ENSRNOG00000001143 Cit 1-to-1
Cow bosTau6 ENSBTAG00000008963 CIT 1-to-1
Chicken galGal4 ENSGALG00000007354 CIT 1-to-1
Chicken galGal3 ENSGALG00000007354 CIT 1-to-1
Zebrafish danRer10 ENSDARG00000089856 CIT 1-to-1
Fruitfly dm6 FBgn0002466 sti 1-to-1