Special

ENSMUSG00000029516 @ mm10

Biotype
protein_coding
Gene Symbol
Cit
Description
citron [Source:MGI Symbol;Acc:MGI:105313]
Coordinates
chr5:115845278-116008947:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
63.78
72.26
0
Alternative 3'ss
63
chr5:115846284-115846346
+
36.22
72.26
0
Alternative 3'ss
0
NA
+
87.87
25.79
0
Alternative 3'ss
27
chr5:115968937-115968963
+
12.05
25.79
0
Alternative 3'ss
0
NA
+
80.64
72.09
0
Alternative 3'ss
45
chr5:115981650-115981694
+
19.34
72.09
0
Alternative 3'ss
0
NA
+
59.11
82.08
0
Alternative 3'ss
3
chr5:116005782-116005784
+
40.77
82.08
0
Alternative 5'ss
0
NA
+
59.7
79.31
0
Alternative 5'ss
22
chr5:115845302-115845323
+
40.3
79.31
0
Alternative 5'ss
0
NA
+
95.86
59.46
0
Alternative 5'ss
138
chr5:115907835-115907972
+
4.14
59.46
0
Exon Skipping
184
chr5:115908638-115908821
+
94.56
67.89
0
Exon Skipping
126
chr5:115938679-115938804
+
96.93
32.79
0
Exon Skipping
45
chr5:115987688-115987732
+
32.5
91.45
0
Exon Skipping
91
chr5:115875889-115875979
+
98.29
63.83
0
Intron Retention
959
chr5:115925500-115926458
+
14.6
55.16
0
Intron Retention
1233
chr5:115926603-115927835
+
9.1
35.17
0
Intron Retention
252
chr5:115933569-115933820
+
12.78
42.7
0
Intron Retention
7928
chr5:115997854-116005781
+
10.85
46.59
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000122966 CIT 1-to-1
Human hg19 ENSG00000122966 CIT 1-to-1
Rat rn6 ENSRNOG00000001143 Cit 1-to-1
Cow bosTau6 ENSBTAG00000008963 CIT 1-to-1
Chicken galGal4 ENSGALG00000007354 CIT 1-to-1
Chicken galGal3 ENSGALG00000007354 CIT 1-to-1
Zebrafish danRer10 ENSDARG00000088825 CDC42BPA 1-to-1
Fruitfly dm6 FBgn0002466 sti 1-to-1