Special

ENSMUSG00000035236 @ mm9

Biotype
protein_coding
Gene Symbol
Scai
Description
suppressor of cancer cell invasion [Source:MGI Symbol;Acc:MGI:2443716]
Coordinates
chr2:38921734-39046254:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
33.22
35.56
0
Alternative 3'ss
75
chr2:38938373-38938447
-
66.78
35.56
0
Alternative 5'ss
0
NA
-
86.49
89.29
0
Alternative 5'ss
76
chr2:39045433-39045508
-
13.51
89.29
0
Exon Skipping
79
chr2:38957841-38957919
-
94.54
100
0
Exon Skipping
126
chr2:38949957-38950082
-
19.24
98.92
0
Exon Skipping
143
chr2:38938230-38938372
-
21.17
68.81
1
Exon Skipping
101
chr2:39005834-39005934
-
17.89
74.65
1
Intron Retention
803
chr2:38957920-38958722
-
20.07
74.11
0
Intron Retention
2845
chr2:38954996-38957840
-
19.42
45.37
0
Intron Retention
2990
chr2:38936068-38939057
-
9.96
34.27
0
Intron Retention
196
chr2:38935698-38935893
-
10.44
50
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000173611 SCAI 1-to-1
Human hg19 ENSG00000173611 C9orf126 1-to-1
Rat rn6 ENSRNOG00000025278 Scai 1-to-1
Cow bosTau6 ENSBTAG00000015553 SCAI 1-to-1
Chicken galGal4 ENSGALG00000001037 SCAI 1-to-1
Chicken galGal3 ENSGALG00000001037 SCAI 1-to-1
Zebrafish danRer10 ENSDARG00000060865 scai 1-to-1
Fruitfly dm6 FBgn0035677 CG13293 1-to-1