Special

ENSMUSG00000035236 @ mm10

Biotype
protein_coding
Gene Symbol
Scai
Description
suppressor of cancer cell invasion [Source:MGI Symbol;Acc:MGI:2443716]
Coordinates
chr2:39066214-39190734:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
23.25
49.31
0
Alternative 3'ss
75
chr2:39082853-39082927
-
75.85
51.36
0
Alternative 5'ss
0
NA
-
87.28
90.38
0
Alternative 5'ss
76
chr2:39189913-39189988
-
12.72
90.38
0
Exon Skipping
79
chr2:39102321-39102399
-
94.64
100
0
Exon Skipping
126
chr2:39094437-39094562
-
17.13
100
0
Exon Skipping
218
chr2:39082710-39082927
-
27.89
100
1
Exon Skipping
101
chr2:39150314-39150414
-
16.96
74.65
1
Intron Retention
803
chr2:39102400-39103202
-
21.36
74.11
0
Intron Retention
2845
chr2:39099476-39102320
-
22.11
53.11
0
Intron Retention
2990
chr2:39080548-39083537
-
10.15
34.27
0
Intron Retention
196
chr2:39080178-39080373
-
10.31
50
0
Intron Retention
135
chr2:39107073-39107207
-
3.49
66.67
0
Intron Retention
3154
chr2:39103766-39106919
-
8.18
27.64
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000173611 SCAI 1-to-1
Human hg19 ENSG00000173611 C9orf126 1-to-1
Rat rn6 ENSRNOG00000025278 Scai 1-to-1
Cow bosTau6 ENSBTAG00000015553 SCAI 1-to-1
Chicken galGal4 ENSGALG00000001037 SCAI 1-to-1
Chicken galGal3 ENSGALG00000001037 SCAI 1-to-1
Zebrafish danRer10 ENSDARG00000060865 scai 1-to-1
Fruitfly dm6 FBgn0035677 CG13293 1-to-1