Special

ENSMUSG00000043535 @ mm9

Biotype
protein_coding
Gene Symbol
Setx
Description
senataxin [Source:MGI Symbol;Acc:MGI:2443480]
Coordinates
chr2:28979701-29037991:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
112
chr2:28981372-28981483
+
94.43
25
0
Exon Skipping
211
chr2:28985700-28985910
+
99.23
36.09
0
Exon Skipping
165
chr2:29029839-29030003
+
10.89
80.64
0
Exon Skipping
4119
chr2:29000123-29004241
+
99.91
2.75
1
Intron Retention
302
chr2:28981070-28981371
+
8.99
27.71
0
Intron Retention
5188
chr2:28989552-28994739
+
5.28
62.86
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000107290 SETX 1-to-1
Human hg19 ENSG00000107290 SETX 1-to-1
Rat rn6 ENSRNOG00000013491 Setx 1-to-1
Cow bosTau6 ENSBTAG00000024822 SETX 2-to-1
Chicken galGal4 ENSGALG00000003661 SETX 1-to-1
Chicken galGal3 ENSGALG00000003661 SETX 1-to-1
Zebrafish danRer10 ENSDARG00000022996 setx 1-to-1