Special

ENSMUSG00000044320 @ mm10

Biotype
protein_coding
Gene Symbol
1700001O22Rik
Description
RIKEN cDNA 1700001O22 gene [Source:MGI Symbol;Acc:MGI:1923631]
Coordinates
chr2:30794769-30803661:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
-
7.71
100
0
Alternative 3'ss
72
chr2:30796212-30796283
-
92.27
100
0
Alternative 5'ss
0
NA
-
70.47
100
0
Alternative 5'ss
36
chr2:30796109-30796144
-
29.53
100
0
Alternative 5'ss
31
chr2:30800724-30800754
-
86.78
39.53
0
Alternative 5'ss
47
chr2:30800708-30800754
-
13.17
39.53
0
Exon Skipping
88
chr2:30800914-30801001
-
83.69
74.11
0
Exon Skipping
268
chr2:30798687-30798954
-
3.74
25.37
0
Exon Skipping
21
chr2:30796546-30796566
-
73.51
90.68
0
Intron Retention
2743
chr2:30797981-30800723
-
13.55
31.33
0
Intron Retention
339
chr2:30795806-30796144
-
24.94
43.8
0
Intron Retention
138
chr2:30801002-30801139
-
19.13
63.67
0
Intron Retention
117
chr2:30796284-30796400
-
10.78
41.08
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000179058 C9orf50 1-to-1
Human hg19 ENSG00000179058 C9orf50 1-to-1
Rat rn6 ENSRNOG00000018486 RGD1311084 1-to-1
Cow bosTau6 ENSBTAG00000019513 C9orf50 1-to-1