Special

ENSRNOG00000007657 @ rn6

Biotype
protein_coding
Gene Symbol
Col27a1
Description
collagen type XXVII alpha 1 chain [Source:RGD Symbol;Acc:735115]
Coordinates
chr5:79055521-79170765:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]



EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
21.96
31.42
0
Alternative 5'ss
4
chr5:79094762-79094765
+
78.04
31.42
0
Alternative 5'ss
0
NA
+
27.46
22.06
0
Alternative 5'ss
8
chr5:79098537-79098544
+
72.54
22.06
0
Alternative 5'ss
0
NA
+
15.93
16.06
0
Alternative 5'ss
8
chr5:79111695-79111702
+
84.07
16.06
0
Exon Skipping
848
chr5:79114715-79115562
+
0.84
24.05
0
Intron Retention
101
chr5:79162059-79162159
+
12.62
36.26
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000196739 COL27A1 1-to-1
Human hg19 ENSG00000196739 COL27A1 1-to-1
Mouse mm10 ENSMUSG00000045672 Col27a1 1-to-1
Mouse mm9 ENSMUSG00000045672 Col27a1 1-to-1
Cow bosTau6 ENSBTAG00000019807 COL27A1 1-to-1
Chicken galGal4 ENSGALG00000006958 1-to-1
Chicken galGal3 ENSGALG00000006958 COL27A1 1-to-1
Zebrafish danRer10 ENSDARG00000099930 col27a1b 1-to-2
Zebrafish danRer10 ENSDARG00000101258 COL27A1 (2 of 2) 1-to-2