Special

FBgn0028863 @ dm6

Biotype
protein_coding
Gene Symbol
CG4587
Description
This gene is referred to in FlyBase by the symbol DmelCG4587 (FBgn0028863). It is a protein_coding_gene from Dmel. It has 9 annotated transcripts and 9 polypeptides (2 unique). Gene sequence location is 2L:15644183..15718272. Its molecular function is described by: voltage-gated calcium channel activity. The biological processes in which it is involved are not known. 9 alleles are reported. No phenotypic data is available. The phenotypic classes of alleles include: pain response defective; some die during pupal stage; partially lethal - majority die; lethal; viable. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of no expression detected. Peak expression observed within 18-24 hour embryonic stages, during early larval stages.
Coordinates
chr2L:15644183-15718272:-
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
33
chr2L:15649699-15649731
-
30.63
92.38
0
Intron Retention
441
chr2L:15649732-15650172
-
23.85
60.4
0
Intron Retention
180
chr2L:15649519-15649698
-
27.05
69.79
0
Intron Retention
70
chr2L:15649344-15649413
-
5.25
30.12
0
Intron Retention
69
chr2L:15648466-15648534
-
5.64
94.44
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000151062 CACNA2D4 3-to-2
Human hg38 ENSG00000157445 CACNA2D3 3-to-2
Human hg19 ENSG00000151062 CACNA2D4 3-to-2
Human hg19 ENSG00000157445 CACNA2D3 3-to-2
Mouse mm10 ENSMUSG00000021991 Cacna2d3 3-to-2
Mouse mm10 ENSMUSG00000041460 Cacna2d4 3-to-2
Mouse mm9 ENSMUSG00000021991 Cacna2d3 3-to-2
Mouse mm9 ENSMUSG00000041460 Cacna2d4 3-to-2
Rat rn6 ENSRNOG00000008031 Cacna2d4 3-to-2
Rat rn6 ENSRNOG00000031287 Cacna2d3 3-to-2
Cow bosTau6 ENSBTAG00000013117 CACNA2D3 3-to-2
Cow bosTau6 ENSBTAG00000021994 CACNA2D4 3-to-2
Chicken galGal4 ENSGALG00000005400 CACNA2D3 3-to-3
Chicken galGal4 ENSGALG00000013007 CACNA2D4 3-to-3
Chicken galGal3 ENSGALG00000005400 CACNA2D3 3-to-3
Chicken galGal3 ENSGALG00000013007 CACNA2D4 3-to-3
Zebrafish danRer10 ENSDARG00000023886 cacna2d4b 3-to-2
Zebrafish danRer10 ENSDARG00000078760 cacna2d3 3-to-2