Special

ENSG00000157445 @ hg38

Biotype
protein_coding
Gene Symbol
CACNA2D3
Description
calcium voltage-gated channel auxiliary subunit alpha2delta 3 [Source:HGNC Symbol;Acc:HGNC:15460]
Coordinates
chr3:54122547-55074557:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
44.38
63.09
0
Alternative 3'ss
2
chr3:55073777-55073778
+
55.62
63.09
0
Alternative 5'ss
2
chr3:55073556-55073557
+
55.65
63.32
0
Alternative 5'ss
4
chr3:55073556-55073559
+
39.57
60.83
0
Exon Skipping
79
chr3:54752599-54752677
+
97.98
41.21
0
Exon Skipping
101
chr3:54762671-54762771
+
3.2
38.61
0
Exon Skipping
62
chr3:54879350-54879411
+
64.62
95.45
0
Exon Skipping
95
chr3:54912294-54912388
+
15.51
87.1
0
Exon Skipping
46
chr3:54885281-54885326
+
92.71
28
0
Exon Skipping
98
chr3:54885489-54885586
+
89.44
41.67
0
Exon Skipping
18
chr3:54816853-54816870
+
32.8
97.76
0
Exon Skipping
72
chr3:54837159-54837230
+
96.28
30.77
0
Exon Skipping
71
chr3:54987683-54987753
+
95.22
14.81
0
Exon Skipping
60
chr3:54386715-54386774
+
93
100
0
Intron Retention
52501
chr3:54764352-54816852
+
4.38
73.49
0
Intron Retention
20288
chr3:54816871-54837158
+
6.69
50.29
0
Intron Retention
1337
chr3:54837231-54838567
+
6.91
55.75
0
Intron Retention
260
chr3:54879090-54879349
+
15.41
25.93
0
Intron Retention
219
chr3:55073558-55073776
+
14.27
42.86
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000021991 Cacna2d3 1-to-1
Mouse mm9 ENSMUSG00000021991 Cacna2d3 1-to-1
Rat rn6 ENSRNOG00000031287 Cacna2d3 1-to-1
Cow bosTau6 ENSBTAG00000013117 CACNA2D3 1-to-1
Chicken galGal4 ENSGALG00000005400 CACNA2D3 1-to-1
Chicken galGal3 ENSGALG00000005400 CACNA2D3 1-to-1
Zebrafish danRer10 ENSDARG00000078760 cacna2d3 1-to-1
Fruitfly dm6 FBgn0028863 CG4587 2-to-3
Fruitfly dm6 FBgn0261041 stj 2-to-3
Fruitfly dm6 FBgn0261999 CG42817 2-to-3