Special

FBgn0261999 @ dm6

Biotype
protein_coding
Gene Symbol
CG42817
Description
The gene Ca[2+] channel Muscle-specific alpha2/delta subunit is referred to in FlyBase by the symbol DmelCa-Ma2d (CG42817, FBgn0261999). It is a protein_coding_gene from Dmel. It has 3 annotated transcripts and 3 polypeptides (1 unique). Gene sequence location is 2L:16231475..16241527. Its molecular function is described by: voltage-gated calcium channel activity. The biological processes in which it is involved are not known. 8 alleles are reported. The phenotypes of these alleles manifest in: sarcomere; M band; nucleus; embryonic/larval somatic muscle. The phenotypic classes of alleles include: flightless; viable; fertile; locomotor behavior defective.
Coordinates
chr2L:16231475-16241527:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Intron Retention
3385
chr2L:16232235-16235619
+
5
77.42
0
Intron Retention
184
chr2L:16236950-16237133
+
3.43
50
0
Intron Retention
57
chr2L:16237311-16237367
+
4.13
71.07
0
Intron Retention
64
chr2L:16237446-16237509
+
3.33
100
0
Intron Retention
67
chr2L:16238661-16238727
+
5.98
100
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000151062 CACNA2D4 3-to-2
Human hg38 ENSG00000157445 CACNA2D3 3-to-2
Human hg19 ENSG00000151062 CACNA2D4 3-to-2
Human hg19 ENSG00000157445 CACNA2D3 3-to-2
Mouse mm10 ENSMUSG00000021991 Cacna2d3 3-to-2
Mouse mm10 ENSMUSG00000041460 Cacna2d4 3-to-2
Mouse mm9 ENSMUSG00000021991 Cacna2d3 3-to-2
Mouse mm9 ENSMUSG00000041460 Cacna2d4 3-to-2
Rat rn6 ENSRNOG00000008031 Cacna2d4 3-to-2
Rat rn6 ENSRNOG00000031287 Cacna2d3 3-to-2
Cow bosTau6 ENSBTAG00000013117 CACNA2D3 3-to-2
Cow bosTau6 ENSBTAG00000021994 CACNA2D4 3-to-2
Chicken galGal4 ENSGALG00000005400 CACNA2D3 3-to-3
Chicken galGal4 ENSGALG00000013007 CACNA2D4 3-to-3
Chicken galGal3 ENSGALG00000005400 CACNA2D3 3-to-3
Chicken galGal3 ENSGALG00000013007 CACNA2D4 3-to-3
Zebrafish danRer10 ENSDARG00000023886 cacna2d4b 3-to-2
Zebrafish danRer10 ENSDARG00000078760 cacna2d3 3-to-2