Special

ENSMUSG00000041460 @ mm10

Biotype
protein_coding
Gene Symbol
Cacna2d4
Description
calcium channel, voltage-dependent, alpha 2/delta subunit 4 [Source:MGI Symbol;Acc:MGI:2442632]
Coordinates
chr6:119236526-119352407:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Pre-implantation embryo development
  • Ribosome-engaged transcriptomes of neuronal types
  • Neural differentiation time course
  • Muscular differentiation time course
  • Spermatogenesis cell types
  • Reprogramming of fibroblasts to iPSCs
  • Hematopoietic precursors and cell types

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
87
chr6:119348191-119348277
+
3.61
33.33
0
Exon Skipping
75
chr6:119278189-119278263
+
79.86
100
0
Exon Skipping
21
chr6:119345430-119345450
+
81.26
95.05
0
Exon Skipping
91
chr6:119307527-119307617
+
7.6
15.22
0
Exon Skipping
205
chr6:119308836-119309040
+
17.34
26.3
0
Exon Skipping
128
chr6:119308677-119308804
+
87.8
7.89
0
Exon Skipping
81
chr6:119277820-119277900
+
97.67
13.95
0
Intron Retention
288
chr6:119277901-119278188
+
6.64
30.92
0
Intron Retention
15227
chr6:119282251-119297477
+
4.83
22.06
0
Intron Retention
1711
chr6:119298498-119300208
+
11.94
33.29
0
Intron Retention
23887
chr6:119312504-119336390
+
7.33
18.75
0
Intron Retention
188
chr6:119337927-119338114
+
16.64
49.89
0
Intron Retention
485
chr6:119344043-119344527
+
13.05
52.14
0
Intron Retention
463
chr6:119344581-119345043
+
13.11
31.14
0
Intron Retention
333
chr6:119345097-119345429
+
11.34
42.74
0
Intron Retention
1683
chr6:119345451-119347133
+
19.53
67.69
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000151062 CACNA2D4 1-to-1
Human hg19 ENSG00000151062 CACNA2D4 1-to-1
Rat rn6 ENSRNOG00000008031 Cacna2d4 1-to-1
Cow bosTau6 ENSBTAG00000021994 CACNA2D4 1-to-1
Chicken galGal4 ENSGALG00000013007 CACNA2D4 1-to-1
Chicken galGal3 ENSGALG00000013007 CACNA2D4 1-to-1
Zebrafish danRer10 ENSDARG00000023886 cacna2d4b 1-to-3
Zebrafish danRer10 ENSDARG00000026855 cacna2d4a 1-to-3
Zebrafish danRer10 ENSDARG00000103810 cacna2d4a 1-to-3
Fruitfly dm6 FBgn0028863 CG4587 2-to-3
Fruitfly dm6 FBgn0261041 stj 2-to-3
Fruitfly dm6 FBgn0261999 CG42817 2-to-3