Special

FBgn0261041 @ dm6

Biotype
protein_coding
Gene Symbol
stj
Description
The gene straightjacket is referred to in FlyBase by the symbol Dmelstj (CG12295, FBgn0261041). It is a protein_coding_gene from Dmel. It has 4 annotated transcripts and 4 polypeptides (3 unique). Gene sequence location is 2R:13805794..13819571. Its molecular function is described by: voltage-gated calcium channel activity. It is involved in the biological process described with 7 unique terms, many of which group under: neuromuscular junction development; synaptic signaling; macroautophagy; divalent metal ion transport; detection of stimulus. 31 alleles are reported. The phenotypes of these alleles manifest in: cell component; synapse; organ system; somatic cell; cell. The phenotypic classes of alleles include: flightless; stress response defective; some die during embryonic stage; phenotype. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderate expression to a trough of very low expression. Peak expression observed within 12-24 hour embryonic stages, during early larval stages, at stages throughout the pupal period, in adult male stages.
Coordinates
chr2R:13805794-13819571:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
57
chr2R:13814968-13815024
+
31.33
91.81
0
Exon Skipping
48
chr2R:13816036-13816083
+
10.69
26.88
0
Exon Skipping
395
chr2R:13809275-13809669
+
98.58
31.25
0
Exon Skipping
450
chr2R:13809914-13810363
+
98.43
49.5
0
Exon Skipping
141
chr2R:13810479-13810619
+
98.68
44.47
0
Exon Skipping
84
chr2R:13810753-13810836
+
98.42
53.15
0
Exon Skipping
57
chr2R:13811198-13811254
+
27.27
95.62
0
Exon Skipping
54
chr2R:13812438-13812491
+
18.28
85.88
0
Intron Retention
554
chr2R:13815649-13816202
+
14.87
33.33
0
Intron Retention
87
chr2R:13816980-13817066
+
12.22
66.54
0
Intron Retention
1099
chr2R:13808176-13809274
+
39.5
87.55
0
Intron Retention
244
chr2R:13809670-13809913
+
16.37
47.71
0
Intron Retention
115
chr2R:13810364-13810478
+
17.9
70.14
0
Intron Retention
2963
chr2R:13810837-13813799
+
33.03
66
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000151062 CACNA2D4 3-to-2
Human hg38 ENSG00000157445 CACNA2D3 3-to-2
Human hg19 ENSG00000151062 CACNA2D4 3-to-2
Human hg19 ENSG00000157445 CACNA2D3 3-to-2
Mouse mm10 ENSMUSG00000021991 Cacna2d3 3-to-2
Mouse mm10 ENSMUSG00000041460 Cacna2d4 3-to-2
Mouse mm9 ENSMUSG00000021991 Cacna2d3 3-to-2
Mouse mm9 ENSMUSG00000041460 Cacna2d4 3-to-2
Rat rn6 ENSRNOG00000008031 Cacna2d4 3-to-2
Rat rn6 ENSRNOG00000031287 Cacna2d3 3-to-2
Cow bosTau6 ENSBTAG00000013117 CACNA2D3 3-to-2
Cow bosTau6 ENSBTAG00000021994 CACNA2D4 3-to-2
Chicken galGal4 ENSGALG00000005400 CACNA2D3 3-to-3
Chicken galGal4 ENSGALG00000013007 CACNA2D4 3-to-3
Chicken galGal3 ENSGALG00000005400 CACNA2D3 3-to-3
Chicken galGal3 ENSGALG00000013007 CACNA2D4 3-to-3
Zebrafish danRer10 ENSDARG00000023886 cacna2d4b 3-to-2
Zebrafish danRer10 ENSDARG00000078760 cacna2d3 3-to-2