Special

ENSG00000157445 @ hg19

Biotype
protein_coding
Gene Symbol
CACNA2D3
Description
calcium channel, voltage-dependent, alpha 2/delta subunit 3 [Source:HGNC Symbol;Acc:15460]
Coordinates
chr3:54156574-55108584:+
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 3'ss
0
NA
+
52.88
30.68
0
Alternative 3'ss
2
chr3:55107804-55107805
+
47.12
30.68
0
Alternative 5'ss
2
chr3:55107583-55107584
+
91.39
6.65
0
Alternative 5'ss
0
NA
+
11.34
4.25
0
Alternative 5'ss
4
chr3:55107583-55107586
+
88.66
4.25
0
Exon Skipping
62
chr3:54913377-54913438
+
65.61
90.2
0
Exon Skipping
95
chr3:54946321-54946415
+
11.93
72.97
0
Exon Skipping
46
chr3:54919308-54919353
+
93
28
0
Exon Skipping
98
chr3:54919516-54919613
+
89.42
39.29
0
Exon Skipping
18
chr3:54850880-54850897
+
34.21
98.46
0
Exon Skipping
72
chr3:54871186-54871257
+
96.37
30.77
0
Exon Skipping
71
chr3:55021710-55021780
+
95.36
14.29
0
Intron Retention
52501
chr3:54798379-54850879
+
5.04
73.49
0
Intron Retention
20288
chr3:54850898-54871185
+
7.22
50.29
0
Intron Retention
1337
chr3:54871258-54872594
+
7
55.75
0
Intron Retention
260
chr3:54913117-54913376
+
16.74
25.93
0
Intron Retention
4417
chr3:54914891-54919307
+
7.23
46.78
0
Intron Retention
219
chr3:55107585-55107803
+
15.21
41.93
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000021991 Cacna2d3 1-to-1
Mouse mm9 ENSMUSG00000021991 Cacna2d3 1-to-1
Rat rn6 ENSRNOG00000031287 Cacna2d3 1-to-1
Cow bosTau6 ENSBTAG00000013117 CACNA2D3 1-to-1
Chicken galGal4 ENSGALG00000005400 CACNA2D3 1-to-1
Chicken galGal3 ENSGALG00000005400 CACNA2D3 1-to-1
Zebrafish danRer10 ENSDARG00000078760 cacna2d3 1-to-1
Fruitfly dm6 FBgn0028863 CG4587 2-to-3
Fruitfly dm6 FBgn0261041 stj 2-to-3
Fruitfly dm6 FBgn0261999 CG42817 2-to-3