Special

ENSG00000151062 @ hg38

Biotype
protein_coding
Gene Symbol
CACNA2D4
Description
calcium voltage-gated channel auxiliary subunit alpha2delta 4 [Source:HGNC Symbol;Acc:HGNC:20202]
Coordinates
chr12:1791957-1918836:-
Assembly
Other assemblies

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • The Cancer Genome Atlas (TCGA)
  • Genotype-Tissue Expression Project (GTEx)
  • Autistic and control brains
  • Pre-implantation embryo development

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Exon Skipping
40
chr12:1810543-1810582
-
27.43
41.92
0
Exon Skipping
71
chr12:1801574-1801644
-
45.51
75.31
0
Exon Skipping
53
chr12:1800000-1800052
-
96.91
13.56
0
Exon Skipping
62
chr12:1811662-1811723
-
95.18
17.98
0
Exon Skipping
68
chr12:1858577-1858644
-
96.14
15.24
0
Exon Skipping
46
chr12:1856184-1856229
-
90.84
36.3
0
Exon Skipping
94
chr12:1853951-1854044
-
84.32
41.2
0
Intron Retention
333
chr12:1800053-1800385
-
24.34
48.37
0
Intron Retention
304
chr12:1799696-1799999
-
34.68
41.53
0
Intron Retention
1539
chr12:1793760-1795298
-
15.45
29.16
0
Intron Retention
1242
chr12:1883001-1884242
-
18.39
27.89
0
Intron Retention
566
chr12:1878390-1878955
-
20.8
11.73
0
Intron Retention
575
chr12:1874676-1875250
-
19.06
18.77
0
Intron Retention
2064
chr12:1844530-1846593
-
5.58
24.01
0
Intron Retention
286
chr12:1795382-1795667
-
10.86
28.02
0
Intron Retention
635
chr12:1886374-1887008
-
12.66
49.85
0



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Mouse mm10 ENSMUSG00000041460 Cacna2d4 1-to-1
Mouse mm9 ENSMUSG00000041460 Cacna2d4 1-to-1
Rat rn6 ENSRNOG00000008031 Cacna2d4 1-to-1
Cow bosTau6 ENSBTAG00000021994 CACNA2D4 1-to-1
Chicken galGal4 ENSGALG00000013007 CACNA2D4 1-to-1
Chicken galGal3 ENSGALG00000013007 CACNA2D4 1-to-1
Zebrafish danRer10 ENSDARG00000023886 cacna2d4b 1-to-3
Zebrafish danRer10 ENSDARG00000026855 cacna2d4a 1-to-3
Zebrafish danRer10 ENSDARG00000103810 cacna2d4a 1-to-3
Fruitfly dm6 FBgn0028863 CG4587 2-to-3
Fruitfly dm6 FBgn0261041 stj 2-to-3
Fruitfly dm6 FBgn0261999 CG42817 2-to-3