Special

FBgn0259734 @ dm6

Biotype
protein_coding
Gene Symbol
CG42388
Description
The gene Nostrin is referred to in FlyBase by the symbol DmelNost (CG42388, FBgn0259734). It is a protein_coding_gene from Dmel. It has 7 annotated transcripts and 7 polypeptides (5 unique). Gene sequence location is X:9030205..9054575. Its molecular function is described by: phospholipid binding; lipid binding. It is involved in the biological process described with: plasma membrane organization; imaginal disc-derived wing hair organization; plasma membrane tubulation; germarium-derived female germ-line cyst encapsulation; regulation of adherens junction organization. 40 alleles are reported. The phenotype of these alleles manifest in: wing hair. The phenotypic classes of alleles include: fertile; flight defective; lethal - all die during embryonic stage; lethal; viable. Summary of modENCODE Temporal Expression Profile: Temporal profile ranges from a peak of moderately high expression to a trough of low expression. Peak expression observed within 00-06 hour embryonic stages, during late pupal stages, in adult female stages.
Coordinates
chrX:9030205-9054575:+
Assembly

GENOMIC BROWSER[edit]


EXPRESSION VALUES[edit]


SPECIAL DATASETS

  • Neural diversity
  • Neurogenesis
  • Neuronal activity
  • Splicing factor regulation (brain)
  • Splicing factor regulation (SL2)

EVENTS AND AS PROFILES[edit]

Associated events[edit]

Event
Type
Length
Coordinates
Strand
PSI Average
PSI Range
Annotated Functions
Alternative 5'ss
0
NA
+
30.1
26.6
0
Alternative 5'ss
39
chrX:9042792-9042830
+
69.9
26.6
0
Exon Skipping
279
chrX:9040038-9040316
+
83.37
81.76
0
Exon Skipping
1686
chrX:9049250-9050935
+
25.1
85.85
0
Exon Skipping
86
chrX:9051037-9051122
+
100
0
2



Orthologous genes[edit]

Organism Assembly Gene ID Gene Name Orthology Type

Human hg38 ENSG00000163072 NOSTRIN 1-to-1
Human hg19 ENSG00000163072 NOSTRIN 1-to-1
Mouse mm10 ENSMUSG00000034738 Nostrin 1-to-1
Mouse mm9 ENSMUSG00000034738 Nostrin 1-to-1
Rat rn6 ENSRNOG00000006611 Nostrin 1-to-1
Cow bosTau6 ENSBTAG00000010362 NOSTRIN 1-to-1
Zebrafish danRer10 ENSDARG00000077866 nostrin 1-to-1