BtaEX6060531 @ bosTau6
Exon Skipping
Gene
ENSBTAG00000013636 | DGKZ
Description
diacylglycerol kinase, zeta [Source:HGNC Symbol;Acc:HGNC:2857]
Coordinates
chr15:77247145-77247848:+
Coord C1 exon
chr15:77247145-77247188
Coord A exon
chr15:77247615-77247735
Coord C2 exon
chr15:77247815-77247848
Length
121 bp
Sequences
Splice sites
3' ss Seq
GCCCTGCCTCCTGCCCCCAGCTC
3' ss Score
10.23
5' ss Seq
ACGGTGAGC
5' ss Score
9.44
Exon sequences
Seq C1 exon
GTGAAGAGCTCATCGAGGCTGCAAAGAGGAACGATTTCTGTAAG
Seq A exon
CTCCAGGAGCTGCACCGAGCTGGGGGTGACCTTATGCACCGTGTTGAGCGGAGCCGCACGCTCCTGCACCACGCGGTCAGCACCGGCAGCAAGGAAGTGGTCCGCTACCTGCTGGAGCACG
Seq C2 exon
CGCCCACTGAGATCCTTGATGCCGTGGAGGAAAA
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000013636-'39-47,'39-46,40-47=AN
Average complexity
A_S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.400 A=0.439 C2=0.667
Domain overlap (PFAM):
C1:
PF127962=Ank_2=FE(12.8=100)
A:
PF127962=Ank_2=FE(36.7=100)
C2:
PF127962=Ank_2=FE(10.1=100)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]