BtaEX6083333 @ bosTau6

Exon Skipping

Gene

ENSBTAG00000044132 | NTN5

Description

netrin 5 [Source:HGNC Symbol;Acc:HGNC:25208]

Coordinates

chr18:55748666-55751101:-

Coord C1 exon

chr18:55750450-55751101

Coord A exon

chr18:55748986-55749174

Coord C2 exon

chr18:55748666-55748815

Length

189 bp

Sequences

Splice sites

3' ss Seq

TCACTCCATCCTGTTCCCAGCCT

3' ss Score

6.62

5' ss Seq

GGGGTGAGT

5' ss Score

7.93

Exon sequences

Seq C1 exon

CCAGGCCTGTGGCCCCTCCCCGGGCGTGGATCTCGGCCCACGGGCCCCCTGCAATGGCAGTCTGACCCTGGGCCTGGGGGGCCCTTTCCTCCTGTCGTCCGTCAGCCTGCGCTTCTGCACCCCAGGACCCCCAGCCCTGGTCCTGTCTGCCGCCTGGGCCACCGGAGGGCCCTGGAGGTCACTGTGGCGCAGGCCCGCCTGGCCGGGGGTGTTGGGAGGGCCCGAGAGGGTGATCTTCCGGGTCCCAGCGGGCCCGAAGGCCAGCGTGGTGGCCAGTCACCTCCGCCTGGAGCTCGGGGGCCGGGGAGGGCTGGCAGCCGCGGGCGTGAGAGGCCGCTGCCAGTGCCACGGCCACGCGGCCCGCTGCGCTGCCCGCGACCGGCCACCCCGCTGTCGCTGCCGCCACCATACCACCGGCCCGGGCTGTGAGAGCTGCCAGCCATCCCACCGCGACTGGCCCTGGCGGCCTGCCACGCCCCGGCACCCTCACCCCTGCCTGC

Seq A exon

CCTGCTCCTGCAACCAGCACGCGCGACGCTGCAGGTTCAACTCTGAGCTGTTCAGGCTGTCGGGCGGCCGGAGCGGGGGCGTTTGTGAGCGGTGCCGCCACCACACAGCCGGCCGGCACTGCCACTACTGCCAGCCAGGGTTCTGGAGGGACCCCGGCCAGCCCATCAGCAGCCGCAAGGCCTGCAGGG

Seq C2 exon

CCTGCCAGTGCCATCCAATTGGGGCGACAGGCGGTGCCTGCAACCAGACCAATGGGCAGTGCTCCTGCAAGTTAGGGGTCACTGGCCTGACCTGCAACCGCTGTGGTCCCGGCTACCAGCAGAGCCGCTCCCCCAGGATGCCCTGCCAGC

VastDB Features

Vast-tools module Information

Secondary ID

ENSBTAG00000044132-'2-4,'2-2,3-4=AN

Average complexity

A_S

Mappability confidence:

100%=100=100%

Protein Impact

Alternative protein isoforms (No Ref)

No structure available

Features