BtaINT0126083 @ bosTau6
Intron Retention
Gene
ENSBTAG00000002725 | RNGTT
Description
Bos taurus RNA guanylyltransferase and 5'-phosphatase (RNGTT), mRNA. [Source:RefSeq mRNA;Acc:NM_001046085]
Coordinates
chr9:61993719-62006982:+
Coord C1 exon
chr9:61993719-61993966
Coord A exon
chr9:61993967-62006872
Coord C2 exon
chr9:62006873-62006982
Length
12906 bp
Sequences
Splice sites
5' ss Seq
CAGGTAACC
5' ss Score
8.66
3' ss Seq
CCTATCTTCATGTTATTTAGGAA
3' ss Score
7.63
Exon sequences
Seq C1 exon
TCGCCTAGAGTTGAGCCTGAATGGAAGTGGCGCGCTGCCGCTGACGTTACCCGCGTCCGAGCGGCTAGGGTTCGGACGCCGTCCGGGATTCGGGTACCTCAGACCTGTGGTTCAGAGCGGACCGCGAGGAGGCGGCGGCTAGGCCGAGCGTTGGTGGAGGGGCGGCTGTGCGCGGCCCCAAGACATGGCTCACAACAAGATCCCGCCGCGGTGGCTAAACTGTCCGCGGCGCGGCCAGCCGGTGGCAG
Seq A exon
GTAACCGGGACCGGGGTGTTCGAGTCCCCGCGCACGGGCGGGTCCGAGAGTGGGCTGAGGGCGTGCAGCTTTCGGTAGTGGTGTTTCAGGACCGAGATATGTTCGGTCCGATGAAGCTTGTTTGGGAATCTGGACTGGAGGGAATAGGGGCACTTGTTAAGGCTAAATGTTGCAAACAGGAAGGTAGATAGGAGGTTTCTGTGTGGCAGGAACTGAGGACGCAAGAACTCAAGGGGCAGTACTTTGAAGCTTAGTCAAGAGTTTTGTAAACCTTTCAGGGTTCTCGGAAGGGTGTCTGTCGGTCTTGAGATGAAGGAAGGCTTAAGAAGAGGAAGGGCAGTTCCCAGCGGTGAAATTGATCCACACCGAGACTGGAGGTTTTTGTTTTGCTTAGTTTTTTAAAATCTTTTTTTTTTTTTAAAGAATGACTTTTGAGGACTTTTTCATCTTTGAGTTTGACCCAACAGACTTTAAATTTAAAAGTGTACCGTTGGGTAAATTTTGACTTCCGCACACCCCCTATGAAACACAGATAGTAAACATAATCATCACCTCTTCAGGTTTCCTCCAGCTCTTGATAATCCCTCCCTCTGCAGGCAACCGGTGATCTGCTCTCTGTCACTATAGATTTAGTTTGCATTTTGTATAATTTTTAAAATAAATGGAAACATACTCTCTTTTGGGGACGATCTCTGGCATCTTTCACTCAGCATTATTATTTTGAGATTTATACGTGTGCTTGTGTGTATCATTAACTCATCCCTTATTACTGCCAAGTAATAGTCTATTGTTACAGCTACACCGGTTTAAATTAGATTTGTTTATTCATTCATTCGTTGATGGTCCTTTGGGTTTTCAGTTTTTGGCTGTTGCATACTAACTTACTATGAACATTAATGTGCAGTTCTTTGTATGGGCATATGTTTTCTTTTCCCCTGTGTAAATCTTTAGGAGAGGGATGGATCATACAGTAGGTGTACGTTTAACATTTCAAAAAACTGCCAAACTCTTTTCAAAGTCATAACATTTTGCATTCCTGACTATCAGTATGAGGATTTTTCTTTGCTCCATATCCTAACACTTGATTTGATCAGTCTTTTTAATATTACCCGTTCTTTACCAACTGAGCTCTCAGGGAAGCCCCAATAGGGACTTAGTACTGTCTTATTGTGGTTTGATGTTGAGCATCTTTTCATGTGCTTCTTGGAAATATCTTCTTTTATGAAATGTCCAAAACTTTTGCTGATTTAAAAAATATTTATTTTTATTTATTTGACTGTGCAGGGTCTTAGTTGCAGCACTTGGGATCTATGATCTTTGTGCGGCACTGGAGATCGTAAGATGGGGCATGTGGAAACTCTTAGTTGCAGAATGTAGGATCTAGTTCCCTAGCCAGGGATCCAACCTAGGACCCCTGCATTGGGAACTCAGAGTCTTAGCCACTGGGTCACCAGGGAAGTTCCTTTGCTGATTTTTAAAATTGGGTGGTTTTATTTTTGAGTTGTTATTTTTCTTTATATGTTGTAAATACAAATCTTTTTTTTGTTGTTCAATTGCTAAGTCATGTCCAACTCTTAGCAACCCCTTGAACTGCAGCACGCCAGGTTTCCCTGTCCTTCTCAATCTCCTGGAGTTTGCTCAAACTCACATCCAATGAGTCGGTGATGCTATCCAACCAACTCATCCTCTGTTACCCCTTCTCCTCTTGCCCTCCGTCTTTCCCAGCATCAGGGTCTTTTCCAGTGAGTTGGCTCCTTGCATCAGATGGCCAAAGTATTGGAACTTCATATGCTTTTCAAAGTCTTTTCTCCAGTTTGTGGCTTGCCTTTTCATTCTCTTTTGTTGTTTCTTTTGAAGAATTAAAATTTTAAAGTTTAACTAACGTCAACCTAATGCTTTTTCTAGAAGATGTTTTGAAACAAAATTAAAGGATTTTGTAGTGAACTATGCATGCTTATTAATTATATACACATCTTTAGTATGTCTGCCTAGTTATTTTAAATGGTTGGAAGAGAAGATTCTGTAGTCATTTTTTAATTCATGTTTTCTGATTCTTCTGGTTTGTCAGCTTTTCTTCACATTTTATGTTAAATCTTCAGTCAGTAAAACCATATAAATGATGGATAAAAGTCTTATTGAAAGATAATCTAAATAAGTCTTAGGGTGAGGAAATGGTTTTCCTTAACAAAAATGAAATAATTTTCTTTATGTTCTAACCATTTTTATAGGCATTTTCACTTGTAGTTGATAGTCATTGTACTTTCTTTAGATGAATTGATTACAGTTCTTTACACTTTTCTTTATAGGTCTTACTCTTCAGACATTTTGACTTTTTTCCCTTGTTATCTCTAACTTAGTATTGAATCTTTTTTTTTTTTTTTTTTACATTTTCCCCCATTATAGAGTTATGAAGAAACCTCTGAACTTAGATGTCTGACTTCTTTTTTAACTTGGCACATGTTTCTGGATGCTTTATTATTAGAGTTACCAGCTACATTTATTTGTGAGGAAAACAAAATCATAAAGAAGATCTTGTCAAAAGAGAATTATTTTTTATTTGGAATTAGAAAAACAGCTTAAAAGTCAGAATTTTAATGTAGTCTGCTCATGGCAATGACAAATATCAGGATACTGACTTCTTGGTAGATAAAGGGACACATGTATGTACTGACTGGGGGTGGACAGCAGCCAGTGAAGTGCAAGCCCTAGACAGCTTTATCACTCTAAGAAATAGAGTTGTGTGCTTTTCTTTTCTTTTTCCCTCTCCTGGAGATGAAGGGTCAGGAATAAAAAAGTTTTCCTTTTTATTGTATTGGAGTATTTTAACCCCCAAAAGCTAGACTTTTAGTTATTGTGCTCACTGAGTCACTAAACTCAGCTCATCTGAGCAGCTGTGGGCCCTGGACAGAACCCCAGGCCTCCTGGCAACCAACTGGATCTTTACTGGTAATCAGGTCTGCTTTGGCATGTGACCCTTGTTAAAAAGTAAAGGGAATACAACATAAAATTCTTAAATCTCTCTGAATTTACCTTAAAATTCTGTGTCCTAGAAGCGTTCATGACACATTGTGTATTTTAGATAATGCAGGGTTGGCAGTGTTTTATAGTAGTAGAACAAGAAATGCTAGCTATATTATTGCAAGCTTTAGGGAAAAATAAGGAATCATTCATATTCCCAATTTCTGCCTCCTCTTTTCTTCCTCTTTTTTCTCATTAGAAAAAGAATCCATGCTTATTGTATAATTTCTTTGATATTTTGCACATTTAGAAAAATATGATGGCTAAATTTTCTCATTGTAAACGTTAGGATGCCTTGTTCAGTTCAGTTGCTCAGTTATGTCTGACTCTTAGCGACCCCATGGACTGTAGCACGCCAGGCTTCCTTGTCCATCACCAACTCTTATTAGTACTATGCAAGTTCATAATTTTTCTGAATCAGAAAGAAGATGGCACTAATTATAAAAACAAGTTGTTCCCCAATGAAGTTCCTTTTTCTACTTAAACCAGACTTCCAGTGAGAGAGCTCTTGGAGATAGGCCCTTTCTCCTTCTGAGGCTTTTCTGAAGGAACTTCTGAAGAATTCTTTTTTTTCTCCTTCTGAGTGATGGATTTTAGGTGAACACTTTGAATAAAACTAGCTTCTCATTTCTTAAAAGGCAGATTATTCAACATAACAGTTTATATATACTATGTGTAAAGAACTTCCTGGGAACTAACTGGGACTATAAATATGATAGTTTTATGAGAATATTGGTGACTTTGAAGTCATTTTACTTAGCAAATATTTGTGTATACTTTGTGCTAGTTTTTGGGACTTGGGAGATGATTAAGATATAGTCCCTCAACTTAAAAGCATATAGTTTCTTGGAAGTAGTAAATCATCATTTTTAAACAAAGTTTTGTTATAACAAGTACAGTAATATGACTCTATTATAGAATATTATGAGATACTGCTGCTAAGTCACTTTAGTTGTGTCCGACCCTGTGCGATCCCATAGACAGCAGCCCACCAGGCTCCCCCGTCCCTCTGAATCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAGTGTATGAAAGTGAAAAGTGAAAGGGAAGTTGCTCAGTCATGTCCGACTCTTAGCGACTCCATGGACTGCAGCCTACCAGGCTCCTCCGCCCATGGGATTTTCCAGGCAAGAGTACTGGAGTGGAGTGCCATTGCCTTCTCCGTATGAGATACTAGAGGATAAACCCAATTCTTTGTTTGAGGTTAGGGAAGAAGAAAGGGTTCAGGGAAGACTTCCCAGAGGAAGTGTGTGTGAGTTATCTTGAATAAGTAGAAGTTTGCTGCTGCTGCTGCTGCTGCTAAGTCACTTCAGTCATGTCTGACCCTGTGTGACCTTGTAGACGGCAGCCCACCAGGCTCCTCCGTCCCTGGGATTCTCCAGGCAAGAACACTGGAGTGGGTTGCCATTTCCTTCTCCAATGCATGAAAGTGAAAAGTGAAAGGGAAGTCGCTCAGTCATGTCCGACTCTTCGAGACCCCATGGACTGCAGCCTACCAGGCTCCTCTGTCCATGGATTTTCCAGGCAAGAGTACTGGAGTGGGGTGCCATTGCCTTCTCCGAGAAGTTTGCTAGATGGAATTCTCTGGTGGTCCTCCTCTGACTGCCAAGGGCTGGGTTTTGATCTCTAGTCAGGGGAACGAAGATCCCACAAGTTGCACAGGCTAACCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGAAGACAAAGGCACCCCACTCCAGTACTTTTGCCTGGAAAATCCCATGGATGGAGGAGCCTGGTGGGCTGCAGTCCATGGGGTCTCCAAGAGTCGGACATGACTGAGTGACTTCACTTTCACTTTTCACTTTCATGCATTGGAGAAGGAAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGGAGCCTGGTGGGCTGCCGTCTACAAGGTCACACAGAGTCGGACACGACTGAAGTGACTTAGCAGCAGCAGCAGCAGCAGCAGCATGGATATGAGGATGGAGTGTTTGAGCCAAGTCCTAAAGGCTTTAGGGTGTAATAAGGGATTTTAATATTTATATACTTTCAAAGTGCACTGGCAAACCATTGCCATTTCTTAAGCACTGGGGTGAGATGATTTGACTGCAGTTTAAAGAAGCTCACTTTGATTGCTCTGTGTTTGATGAAAGAGACAAGAATGAGAGTGAGGAGACTATTTAGGAACTTTCATGGCAGTCTGGGTGAAAGAATGGTGATGGTTTAGAAGTAGAGTTGGAGTAGTTGGCTTCCTTGGTGGCTTAGCAGCAAAGAATATGCCTGTAGTGCAGGAGATGTGGGTTCAATCCCTGGGTTGGGAAGATCCTTTGGAGGAGTCATGCCAACCCACTCCAGTATTCTTGCCTGGAGAATCCCAGGGACAAAGGTGGGCTACGGTCCATAGGGTTGCAAAGAGTTGGACATGACGGAAGCAACTGAGTGTGCACAGGCTGATTGGAGAAAATTAATGGGGAAGATGAACTTCCCCAGTTGCTCAGCAGTAAAAGAATGTACCTGCAATGCAGGAGATGAGGGTTTGATCCCTGAGTTGGGAAGATCCCCTGGAGAAAGAAGATGGTGGCCCACCCCGGTATTCTTACTTGGAAGATCCCAATCCATGGGATCACAGAAGAATGGGGCACGACCTGCCACTAAACGACAACAACAACAAAGAGGGAAGATAGACAAGACTTGGATTGTTGGATTTAGAATGAGAGGAAGAAAGTAAAAACTTAGTCCTTATGCAGTTGGATGATTGGTACCGTTAGGGCTTGTTGGGGGAGGGAGTGGAAGGCAGGTTGTTAAGATCCTGACTGCACAGGTAGAGATGTTGAGTACACAGCTGGATATATGGTTTGGAATTCAAACAAGTTCGAGTTGTAGATGTACATTTAAGGATCATTAGCATAAAGACAGTTTTTAAAAGCATGGTATTTGGTTAGTCAGGATAAGTTATGCTAGTTTCTCTGACAAGCAACTCCTCAAACTAAATGAGTCTAGTGTTATGGAAGCCAAGAGAATTTTTTAGGAAGGAAGGAAGAGTCAGATGTATGAGATACTGCTAAGACGTAAGATATTAGAAAAGTTGGTAACCACGCAGAAGGGAGGAAAGGTTGATGTCTTTTTGAAGGCAAAATGGAAAGGAATCCAGAGCAGAGGGAAGGGATTTGCCTTTAATGGGAGGAAAGACAGAGGATGAAAGAGAAAATGGACTCAAGAAAATGAAAGAGAAAATGGACAGAAAGGTTTATAACTATAAAAGTGAGGCAAGTTTCCACCCAGTGGTGGAGAGGTGCTGTTGAATAGCAGTTATATTTGTGGACTCCATGTCCAGATCACCTAGGTTTGAATCACTGTTCTCTCATTTACTAGAATTGTGACAGTTTCCAAGTTATTTAATCTCTCTTGTCTTGATTTCCTCATCTGTAAAATGGGGATAATAACATTATGTATGTTTATGTTTAGTTCAGTTCAGTCTCTCAGTCGTGTCCGACTCTTTGCAACCCCATGGACTGCAGCACGCCAGGCCTCGCTGTCCATCAGATGTTAGGAGTAAATTAATAAATCTATATAAAGTGTTTTAAATGGTGTCTGGTATGTGTTAAACATAAGAAGTTGCTTCTTTTTGTCTTTTCTTTTCAGTAATGTATAACATGGAGCCATCAGTTGAAAAAGGGGGTAGAGGAGCTTAGTATATTTTAAAAATGAGAAAAAGATGTGAAACAGAAGATTGCCTTCGAAATTGGTGATTATAATTTATATTGTCACCCATCTGAGATTTTCTCTAGGAGTCGAGCTGCACAGGGGTAGGCCCAAAGAAATCAGATGGTTGGGTTTATCTTGGTCTGGGTTTTTGTCAGGAGAGTGTGGCTGAGCAGTAAGGGACAAGCACAGAGGTTAAGGGTATGTAGAGCAAATAGGATGAGATCTCTGAGATGACAATGAAAAGACAGGTTTAGTGGGATGAAACTTCTAACATACCTTATTATTATTTATTATGTTTCTTGTTTGTGGTTTACTCAATAGAAATTACGCTTCATGAGGGCAGGGATTTTTATCTGTTTTTTTATTTTTTTTAAGTTCTTTTCACTAATATATTCCATGCATCTAGAATAATGCCTGTTACATAATAGGCACTTAATAAATATCTAGTAAATAAACTAGATGAAGTATAATAATCTAGGTGAGATGGTAGAAGTGGTCAGATTCTGGATGTATTTTGAAGACAGATCTGATAGGATTTGCTGATGGTTGAATGTGGGGTGTGTAAGAAAGAGATGGATCAAGGATAATGCCACAGCTTTTGGCCTAAACTGTTAAAGAAAAAAAGGGTGTTACATTTGCTGAGATATGGAGGACCTTAAGAGGAGTTTGAAAATTGAGAGCTCAGATTTGGATACCAAGTCTGAGACATCTGTTAGACATCGCATTGGAGAAAGAATGGCAACCCACTCCAGTGTTCTTGCCTGGAGAATCCCAGGGACGGGGAGCCTGGTGGGCTGCCATCTATGGGGTCGCACAGAGTTGGACACAACTGAAGCGACTTAGCAGCAGCAGCAGAGACTAGTAAGTCGGGTCAGTGATTTGATATTTGATTCTAGAGTTAAGGGAGACATTTGGCACAGAGTTACATGTTTGTGAGTCATTAGTCCCTTGATGGCTTTTAAACCTGTGAGACCGAATGAGACACCAAGGCAGAGAGTGTAGAAAGAAAGGAGGTACAAAGACTGAGCCCTGGGACAAAACATAGAGGGGCCAGGGCGATAAGGAGGCGCTAGTAAAGGAGACTGAGAAGGAGAGGACAGAGGGGAGAAATGGGAGGATGTAGTGTCCTGGAAGCCTTGTGAAGAAAGAGATTCAGGAACTCCCTCTGAGTTAAAAAATGATCAGTTTTTGAGAACTGAGAGTTGACCATTGGACTTAGCAACATGGAGGTTACTGTTGATCTTGAGTTGTTTTGTAGAAAATGTTCAGTTGCTAAGTCATATCCAACTCTTTGTGGAAAATAAAAATAGAAAAAAAAATGATCTTTTTATTTGTTTTGGCTAAAGTCTATGGATACATGTTAAGACTTCTCTTAGATATGATTTTAGGTAGATGTTTATAATTAGTGATTTTATAGTATAAATCAGCTAAAATAGATGATTTAAAAATTGATTTTATAACTTCCCCTATGTTTACACGGTGATTCAGGGAAAAAAAAGGCCAAAAAGTTAGTTTTACTGAAATTAGAATCACTGTAATAGTTGTTTGGTGAGTGATTTTGGTTAGTATGCTTCTCATCCTGATTCTTCTTCTGGGATGTAGGATAAGGTCTGTAAAACGGAGAAAGTGTTGCCAAAATCTTGGCTGTCTGTGCACCAGTGCCAAACAGAAATATGGAGACAGAGTTATGGAGGAGAAGGAAAGAGTGGCGTTACTATTTTGCCAGGCAAAGGGGGAACTTAGTAGGCTAGCACCTAAAAAACTGTGTCCCCCTTCCCTGAATAGGGAAAGGTTAGATTTAACAGTCAGACAGGTTCAGTTCAGTTCAGTTCAGTCGCTCAGTCATGTCTGACTCTCTGCAACCCCATGAATCATAGCACGCCAGGCCTCCCTGTGCATCACCATCTCCTGGAGTTCACTCAAACTCAGGTCCATCGAGTCATCTCATTCTCATTGTCATCCCCTTTTCCTCCTGCCCCCAATCCCTCCCAGCATCAGAGTCTTTTTCAATGAGTCAGCTCTTCGCATGAGGTGGCCAAAGTACTGGAGTTTCAGCTTTAGCATCATTCCTTCCAAAGAACACCCAGGACTGATCTCCCTGGGTGAGAATGGACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTTAAGAGTCTTCTCCAACACCACAGTTCAAAAACATCAATTTTTTGGCGCTCAGCTTTCTTCACAGTCCAACTCTCACATCCATACATGACCACTGGAAAAACCGTAGCCTTGACTAGACGGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTGAATATGCTATCTAGGTTGGTGATAACTTTCCTTCCAAGGAGTAAGCATCTTTTAATTTCATGGCTGCAGTCACCATCTGCAGTGATTTTGGAGCCCAAAAAGATAAAGTCTGACACTGTTTGCCCATCTGTTTCCTATGAAGAGATGGGATAGGGGTATGTGGTAATTATCAAGGCAGTAACAGTCTTCATTCCTTCAAGTTTCAAAAGGGTGGGGTTGCTGACAGGATTAGGGTGTGTGCAGGGTGCTAGGTGGTCTCCTCATCTTGATGAGCCTTTCTGTTCCCCTTAATCTTGCCTCAGGTGCTTTCCTTGCTGCTCCTCCTCTGATCACCATCTTGATCATGGAGGCTCTGAGTCTTGCCTTTAAAGAATGGGGGACAAAAAGGCCTCCATGCCCAAGAGCTCCACAAGGCCCTGCTCGGCATCAGAAGTTCCAATTTCATATTAAAAAAGCTTAATAGGAATATCAAAGAATTGATTTAATTTACTTCATTATCAGTTTTCTAGTACTATATCTTTAAAGGTTTTAAGGCAGTAACTTTGTAATATAGTGGGTTAGAACTTTCTGAACATCTTTCTGGACATTCCATTTACTGGTAATTTCTTTTGCTGTTATATTTGATTGTCGATTTCTAGAATATATGTTGTCCTTAAAAGTTCCAGTATAGTGCCCTTTGAAAGTATAGTATCAGTTCAGTTCAGTACAGTTGCTCAGTTGTGTCCGACTCTTTGCAACCCCATGAATCACAGCACACCAGGCCTCCCTGTCCATCACCAGCTCCCGGAGCTTACTCAGACTCTTGTCCATCGAGTCGGTGATGCCATCCAGCCATCTCATCCTCTGGCGTCCCCTTCTCCTCCTGCCCCTAACCCCTCCCAGCATCAGGGTCTTTTCCAATGAGTCAACTCTTCGCATGAGGTGGTCAAAATATTGGGGTTTCAGCTTCAGCATCAGTCCCTCCAATGAACACCCAGGACTGATCTCCTTTAGGATGAACTGGTTGGATCTCCTTGCAGTCCAAGGGACTCTCAAGAGTCTTCTCCAAAACCACAGTTGAAAAGCATCAATTCTTTGGCGCTCAGCTTTCTTCACAGTCCAACTCTTGCATCCATACATGACCACTGGAAAAACCACAGCGTTGACTAGACGGACCTTTGTTGGCAAAGTAATGTCTCTGCTTTTGAATATGCTATCTAGGTTGGTCTTAACTTTCCTTCCAAGGAGTAAGCGTCTTTTAATTTCATGGCTGCAGTCACTATCTGCGGTGATTTTGGAGCCCCCCCAAATAAAGTCTGACACTGTTTTCACTGTTTCACCATCTATCTGCCATGAAGTGATGGGACCAGATGCCATGATCTTAGTTTTCTGAATGTTGAGCTTTAAGCCAGCTTTTTCACTCTCCTCTTTCATCAAGAGGCTTTTTAGTTCCTCTTCACTTTCTGCCATAAGGGGGGTGTCATCTGCATATCTGAGGTTATTGATATTTCACCTGGCAATCTAAATTCCAGCTTGTGCTTCTTCCAGCCCAGGGTTTCTCATGATGTACTCTGCATATAAGTTAAATAAGCAGGGTGACAATATACAGCCTTGACATACTCCTTTTCCTATTTGGAACCAGTCTGTTGTTCCATGTCCAGTTCTAACTGTTGCTTCCTGACCTGCATATAGGTTTCTCAAGAGGTAGGTCAGGTGGTCTGATATTTCCATCTCCTTAAGAATTTTCCACAGTTTATTGTGATCCACACAGTCAAAGGCTTTGGCATAGTTAATAAAGCAGAAATAGATGTTTTTCTGGAACTCTCTTGCTTTTTCGATGATCCAGTGGATGTTGGCAATTTGATCTCTGGTTCCTCTGCCCTTTCTAAAACCAGCTTGAACATCAGGAAGTTCACGGTTTACATATTGCTGAAGCCTGGCTTGGAGAATTTTGAGCATTACTTTACTAGCGTGTGAGATGAGTGCAATTGTGCAGTAGTTTGGGCATTCTTTGGCATTGCCTTTCTTTGGGATTGGAATGAAAACTGACCTTTTCCAGTCCTGTGGCCACTGCTGAGTTTTCCAAATTTGCTGGCGTATTGAGTGCAGCACTTTCACAGCATCATCTTTCAGGATTTGAAACAGCTCAACTGGAATTCCATCACCTCCACTAGCTTGTTCGTAGTGATACTTTCTAAGGCCCACTTGACTTCACATTCCAGGATATCTGGCTCTAGGTGAGTGATGACACCATCGTGATTATCTGGGTTGTGAAGCTCTTTTTTGTACATTTCTTCTGTGTATTCTTGCCACCTCTTCTTAATATCTTTTGCTTCTGTTAGGTCCATACCATTTCTGTCCTTTATTGAGCCCATCTTTGCATGAAATGTTCCCTTGGTATCTCTGATTTTCTTGAAGAGATCTCTAGTCTTTCCCATTCTGTTGTTTTCCTCTATTTCTTTGCACTGATCACTGTGGAAGGCTTTCTTATCTCTTCTTGCCATTCTTTGGAACTCTGCATTCAGATGCTTGTATCTTTCCTTTTCTCCTTTGCTTTTCACTTCTCTTCTTTTCACAGTTATTTGTAAGGTGTCCTCAGACAGCCATTTTGCTTTTTTGCATTTCTTTTCCATGGGGATGGTCTTGATCCCTGTCTCCTGTACAATGTCTCGAACCTCAGTTCATAGTTCATCAGGCACTCTGTCTGTCAGATCTAGTCCCTTAAATCTATTTCTCACTTCCACTGTATAACCATAAGGGATTTGATTTAGGTCATACCTGAATGGTGTAGTAGTTTTCCCTACTTTCTTCAATTTCAGTCTGAATTTGGCAATAAGGAGCTCATGATCTGAGCCATAGTTAGCTCCCGGTCTTGTTTTTGCTGACTGTATAGAGCTTCTCCATCTTTGGCTGCAAAGAATATAATCAGTCTGATTTTGGTGTTGACCATCTGGTGATGTCCAAGTGTAGAGTCTTCTCTTATGTTGTTGGAAGAGGGTGTTTGCTATGACCAGTGCATTCTCTTCCCAAAACTCTATTAGCCTTTGCCCCGCTTCATTCCATACTCCAAGGCCAAATTTGCCTGTTACTCCATGTGTTTCTTGACTTCCTACTTTTGCATTCCAGTCCCCTATAATGAAAGGACATCTTTTTTGGGTGTTAGTTCTAAAAGGTCTTGTAGGTCTTCACAGAACTGTTCAACTTCAGCCTCTTCAGCGTTACTGATGGGGGCATAGGCTTGGATTACCGTGATATTGAATGGTTTGCCTTGGAAACGAACAGATGTCATTCTGTCGTTTTTGAGATTGCATCCAAGTACTGCATTTTGGACTCTTCTGTTGACCATGATGACTACTCCATTTCTTCTAAGGGATTCCTGCCCACAGTATAGTATAGGTTGAGAGTATTTTATGAACAATTCCATTAAAAATATTGTAAGAAGGTGATTTTGAGAATTGCTAATTATAGAGTTTTAATCCAGAACATTTTCGTTAATGAAAATTATAACCTATCTTCATGTTATTTAG
Seq C2 exon
GAAGATTCTTACCTCTGAAAACAATGTTAGGACCAAGATATGACAGTCAAGTTGCTGAAGAAAATCGATTCCATCCTAGTATGCTTTCAAATTATCTGAAGAGTCTGAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000002725:ENSBTAT00000003532:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.000
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
PF0078215=DSPc=PU(8.3=29.7)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Chicken
(galGal4)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]