BtaINT0166142 @ bosTau6
Intron Retention
Gene
ENSBTAG00000012738 | ZNF827
Description
zinc finger protein 827 [Source:HGNC Symbol;Acc:HGNC:27193]
Coordinates
chr17:12725341-12736925:+
Coord C1 exon
chr17:12725341-12725507
Coord A exon
chr17:12725508-12736733
Coord C2 exon
chr17:12736734-12736925
Length
11226 bp
Sequences
Splice sites
5' ss Seq
CAGGTGACC
5' ss Score
6.54
3' ss Seq
TTTTTTTTTTAATTTTTCAGGGG
3' ss Score
11.22
Exon sequences
Seq C1 exon
CTGTCACGTGTGTGGATTTGAGACGGAGCTCAACGTCCAGTTTGTCAGCCACATGTCGCTCCACGTGGACAAGGAGCAGTGGATGTTCTCCATCTGCTGCACGGCCTGCGACTTCGTCACCATGGAGGAGGCGGAGATAAAGGCACACATCGGCACCAAGCACACAG
Seq A exon
GTGACCGCCTCCCCCACCCCCACCCCCACGTCCTCGCCCTTCCCTCACTTCTCTCCCCCACCCCTTGCCGCCTCGCCTGACAGGGGCATCCGCGTCACTGTGACATTTCCTTCCAAGAGGATGCTGTCCTGTAGCCCCAAGGCCATTGCCTGGCCCGGCTGATGCCTCGCCTGTCTGACATATTCACAGGCTCAGATGCAGTTGAGAGGCTCTGCTTGTCCCTCATCCCAGTCATCACCATCATAGGTAACAGTTATGGAGCTTTGATGACGCCCTAGGCTTGTGATCTCTTCTGACCGCGCTCCGCCGTCCGTATTATTGTGGGTGTACCACACAGGGAGACACTGAGGCTTCACAGAGGTCAGGTCTTCTCTTCAAGGTCTACAACCAGCCCTGACCACTTCCCTGCTGGAGCCCGCTGTGTCCACGCTGTTCTGATGGCCCCTGGCAACCCTGGGCAGAGGGCTGCCGCTCTTTGTTTTCTGGGGTCAGAGCCCAGCTCACCTAGCTCTGCAGGCTCCCCTCCTCTTCCCTGAGACTGCAGCCCTGCCCCTCCCACCCCAGGGCGATGAATGGCAGCTCTGTACAAGCGCAAAGAAAACCAGCTTCTCCTGAAACCACTCAAGGCTGCAGCCAAGACTTTGGCCGGCGCTTTCCTTTCCTTTAAGGCCGTGCTGGTTAACTCCGTCCATTTGACAATGTTAACATTTGACTCCACCACGCACTCGCCCGCTCCCAAGTGATGGTTACGAATGACACCAGCGTGCAGTCATTAAGTGACCATGAAGAGGTGCTCCCCCTGCCTTTTGCTTACAAGTCACTAGCAGAGGTTGCTGACCGCCAGCCCCAGGCAATGGATCTGCCCCTTGCGTCCTCGGCCCGTGACGGATTTGGGAAGGGGCATTTCCCTGACAGCTGTGCTGGCGGTGTGCATGGACGAGAACCGTCTCTTTCTGCTTTCCTGGCCGCCGTGGCTCCGTGGCGCCAACAGCAATAAAAGCTTGCTTTTGTCAGTAAGTTGAGCAGCTCTGACTCGGAGGTCTGCAGAGAGCCGTTATGCTGAGCGAGGAGGTGCGTCTTTACGGTCGGTTTTCTGACTGTAACCACATTAGCACCGTGGGCAGCAGGTGAGCTGGGAAACCCACATCCAAGACAAATTAAATTCAGCATTTCTGGAGTGGCCAGTGGAGGGAAAGGCCAGCCTCGCTTCCATTTCCACTGGCTTTCAGATTTTTCTTTTCTCTTTTCTGTTACACTTTCCTTTCTTCTAACCCTCTCCACCCCAAAGTGCGCCTCAACCCAGCCAAGAACCTTCTTCCTCCCACCCCGATCCACGCCCCCTCTACACTACCCCAAGGAAACCGTAGAAACTAACGCCTGGAGAAATGTTGGACTTGCTCACCTAATTGTCGTCACTGGAAACTTCACTTTCCCGAGTGACCGCTGCAGGCTCACTCACCTCCTCATTGCCACGAGGAACACAGCAATATCTTGTTCCCTCTGAGATAGTGGGGAAGATTCCTTCTTAGTACAGAGAGCCCAGAGTGAAATGCATTAAAGAAGTTTCTCCTTTACCACAGTAGAAGCCTTTAGTGCTGCTGCTATTAGGGAATAAGGTTCTATCCTATTCTATAAGCCAGGGGTGCTAAGCAGCGTATTTCTTAAGGGCCAGAAAGTAAGTATCTCAGGCTTTCAGGCCATACAGTTGCTGTCAGTACTGTTCAGACATGCCATTGGATGGAAAGTAGCCACAGACAATATGTAAAAGAGTGGGCATGGCAGTGTTCCACTAAAACTTGATTTACAAAAACACAAAGTTAAATTTGGCACAAGGGTTATAGTTTGTGACCCCTAGTTATAAGCTAATAGTCTCACAATGAGGGTTTCTTGTATCTAGCTGCTGCTTTGAGGTGTTTGAATTTGCCCCAAAATATGTCAATCTACGTCTGTAATCAACAAGCTGTGTGATTGCAAAGTTATGATATGTATACAGTATGTATACTCTATAATGGGGCTTCCCTGGTGGCTCAGTGGTAAAAAAAAAAAAAAAAAATCCGCCTGCCAATGCAGGAGGCACGAGTTGGATCCCTGTATCAGGAAGATGCACGCAGGCAGACTCTACCATTTGATTTACCTGTCATAAGAACGGGCGTCTTGTGCATCAGTACCCTGGGAGATCTGAGTGCTTTCTTGTTACCTAAATGAGGTTGTAACCTACAGGATAAGCTCTCATGAATCACAGATTTTTACGTAGTCTCCCTAGAATCCACGTCCTTCTTCACACTTCCTTACTGGCTCCTCTTACCCAAGCAAGACCCACTGGTAAATGAAGTGCTGAGCAGGAATTTGAGGAACTGTCTGCTGTTTGGTGTTTGACTCTTCCTTACTCTCTTCCTCTCTGGCTCCTTGTCCCTGCAGAAAAATCAGGAAGGGAAGGTATTCCCTCTGGTGCTTTCTCAATGCAAATTTTGCTGCAGTCTTTAAATGTTGCAATAATGGCATTAAGGAATTTGAACAGCTATTTGGAAAATACAGTCATCTGTACTTCACGTCACACTGACACCAAAAGAATTCCACATAACTTACCCATCCCTGTTAACAAATCAACCCTAGAAAGGCTTGAAGAAAATAGAATATTTATCAAACTTCCAGAATGAGAAGGATTTGTGGGAAGGCGCCAAGATGGTGGAGGAGTAGGACGCGGAAAACACTTTCTCCCCCACAAATTCATCAAAAGAGCATTTAAACGTCAAGTAAATTCCACAAAACAACTTCTGAATGCCGGCAGAGGACATCAGGCACCCAGAAAAGCAACCCAACTCCTTGAAAGGAGGTAGGAAAAAATATTAAAGACAATAAAAGAGACAAAAGAGGGAGGGACGGAGTTCCTTCCCGGGAAGGGAGTCTTAAAAAGAGAGAAGTTTCCAAACACCAGGAAACCTTCTCACTGCCGAATCCGTGCCGAGCTTTGGAAGCACAGAGGGCAACATAACAGGGAGAAAAAATAAATAAACAATTAAAACTCGCAGATTGCGAGCCCTACGGTAACTCCCCCAGCGGAGAAGCAGCGCAGACGCCTGCATCCGCCATTAGCAAGCGGGGGCTGGGCAGGGAGGCGCGGCGCGGGCTGCATCGCTGAGAGTAAGAATCTGGCCTGAATACCCTGAGCACTATCTGAGCGAAATAATTTGGGCTAGCAAACCAGACTGTGGGATATCTACCATGCGAAAAGCCAGCCCTAACCTAAGACACCGCCAGCCCGCGCACGGAACAAAGGACTAAACAGAGATAGCCGGCTGCAGACCTTCCCCCTCCGGTGACAGGCAGCCAGAGCCGGAAGGGGGCAATCGCAGCCCCAGAGAGACATTATCTATAAAACTGGCTTCTTTGCTAACTAAAACTTATTGGGGGTCTGGAGGGTCAACATCTGCCTGAGAAGGTGCGCCAGTTTTACACCCAGATAACCGAGTGGCGGGGAGGCGATAAGTCGCAGCATTGGCGCTCGCCAAACACCTCATCACCTGAGCTGCTCGGACCTGGGAAGAGCACAAAACGCAGGCCCAACTGAGTCTCCGCCTCTGAGGACTACCTGAGTGCCTGAACCTGAGCGGCTTGGACCTGGGAGGTGCATGCAACCCAGGGTCAGCCTCGGATTGTTCCCGGCGGAACAACCTAGAGCCTGAGCAGTGTGGGCAGGGAGGCTACACGCGCCGTGAGTGGGGGCAGACCCAGTGTGGCTGAGGCACTGCGAGCGCACGCCAGTGTCATTTGTTTGCAGCATCCCTCCCTCCCTCCCCACAGCGCGACTGAACAAAGAGAAGAAATACAGCTCCACCCACCAGAACATCGACACAAGCTTCCCTAACCAGGAAACCTTGACAAGCCACCTCTACATACCCACACACAGCGAGGAAACGCCACAATAAAGAGAACTCCACAAACTGCCAGAATACAGAAAGGACTCCCAAACTCAGCAATTTAAACAAGATGAAGAGACAGAGGAATACCCAGCAGATAAAGGAACAGGATAAATGCCCACCAAACCAAACAAAAGAGGAAGAGATAGGGAATCTACCTGATAAAGAATTCCAAATAATGATAGTGAAATTGATCCAAAATCTTGAAATTAAAATGGAGTCACAGATAAATAGCCTGGAGACAAGGATTGAGAAGATGCAAGAAAGGTTTAACAAGGACCTAGAAGAAATAAAAAAGAATCAATATATAATGAATAATGCAATAAATGAAATTATAAACACTCTGGAGGCAACAAATAGTAGAATAACAGAGGCAGAAGATAGGATTAGTGAATTAGAAGATAGAATGGTAGAAATAAATGAATCAGAGAGGATAAAAGAAAAACGAATTAAAAGAAATGAGGACAATTTCAGAGACCTCCAGGACAATATTAAACGCTACAACATTCGAATCATAGGGGTTCCAGAAGAAGAAGACAAAAAGAAAGACCATGAGAAAATACTTGAGGAGATAATAGTTGAAAACTTCCCTAAAATGGGGAAGGAAATAATCACCCAAGTCCAAGAAACCCAGAGAGTCCCAAACAGGATAAACCCAAGGAGAAACACCCCAAGACACATATTAATCAAATTAACAAAGATCAAACACAAAGAACAAATATTAAAAGCAGCAAGGGAAAAACAACAAATAACACACAAGGGAATTCCCATAAGGATAACAGCTGATCTTTCAATAGAAACTCTTCAAGCCAGGAGGGAATGGCAAGACATACTTAAAGTGATGAAAGAAAATAACCTACAGCCCAGATTATTGTACCCAGCAAGGATCTCATTCAAGTATGAAGGAGAAATCAAAAGCTTTTCAGACAAGCAAAAGCTGAGAGAATTCTGCACCACCAAACTAGCTCTCCAACAAATACTAAAGGATATTCTCTAGACAGGAAACACAAAAATGGTGTATAAACTCGAACCCAAAACAATAAAGTAAATGGCAACGGGATCATACTTATCAGTAATTACCTTAAACGTAAATGGGTTGAATGCCCCAACCAAAAGACAAAGACTGGCTGAATGGATACAAAAACAAGACCCCTACATATGTTGTCTACAAGAGACCCACCTCAAAACAGGGGACACATACAGACTGAAAGTGAAGGGCTGGAAAAAGATTTTCCATGCAAATTGGGACCAAAAGAAAGCAGGAGTCACAATACTCGTATCAGATAAATTAGACTTTAAAACAAAGGCTGTGAAAAGAGACAAAGAAGGTCACTACATAATGATCAAAGGATCAATCCAAGAAGAAGATATAACAATTATAAATATATATCCACCCAACACGGGAGCACCGCAGTATGTAAGACAAATGCTAACAAGTATGAAAGGAGAAATTAACAATAACACAATAATAGTGGGAGACTTTAATACCCCACTCACACCTATGGATAGATCAACTAAACAGAAAATTAACAAGGAAAAAAAAAAAAAAAACAAAGAGTCAGATATGACTGAAGTGACTCAGCATGATTAGAATCTGTGAGGTCAGTCAGAGTTTCTCTTCGATGATGGTGATGAAGCAGTATGTCCTGAAACTGATTATTGGACCAGAAACACACTTAATGAAGTCCTTCTTGGGGTCTATTGCCTTTTTTCATCATGAAGGGTAGTCAGAGAGTTTGTACAACTCAGCTCATCCCTCATCATTATAATATGTACCAGAGAGTTTCACCCAAATAATGTTAGCTACCATGATGTGAAATTAGACATGAAATAAATAGTGCCACCACAAAAAAAAAATAAATAAAAATAAAAAAAAAAAAGAAGGATTTGTAAGATACTGAGTGACACACAAAATCACAAAGGAAAAAAAACTAAGAGGTTTGACACAGAAGTTTCTTCTGTTTGCAAAAGAAAAGCAAAGTTAAAAAACCACAGTCTGTAAAATGTGTTTATAAAAATGACCAAAGATTAATACATTTACAGCATGGAAAATTCATATAAACTGGTTAGAAACACTTAGAGCCTCCAGTTGAAGAATTTACAAAGGACATGAACAGTCAACTCACAATGAAAGAAATAAAAACGAATCACTTAACATCAGCAAAAATACCCAACCTTGCTAGCAGTCAAACTAAAACTCAGAAGTGGCTTACGTTTCACCTGTTAAGTCAGGAGCATATCTTATAACATTCTCCACTGTTGCCAGAAGCTGCTGATCCTCCTGTGGCCGTGGCCTTGCAAAGTGGCAGAACTTTTGAAAACTAATTAGTATACACCAAGAGTCTTGAAAATGTAATGTACTATGACCCAGTCATCCCACTTCTGGGAATTTATCTGTAGGAAAAATAAAAGCAGCCAGTATAATATTAATTTTAATTTAAAATTTAATTTTAAAGAAATATTTTAGGAGAGTAGAATAAGTTTAAGGCTTCCCAGGCGGCACTAATGGTAAAGAATCCGCCTGCCAATGCAGGAGACCTAACAGATGTGGGTTCAATCCCTGGGTCGGGAAGATCCCCTGGAGCAGGAAATGGCAACCCACTCCAGGACTCTTGCCTGGAGAATCCCACGGACAGAGGAGCCTGGCAGACTGTGGGCAATAGGGTTGCAAAGAGTCAGACGTGACTGAAGCAACTTAGCATGTTCACACATGCATGCAGAATAAGTTTACTCCATGGATATAATACTATCACTTAAAACTATTAATTCATAATTATTTTTATAAATTTTTTGAGAGCCAACTGTATCTCAGGTATATACAACAACATGGGAAAATACAAAAAGTTATTAATATTATTATATTTTATAAATATTGTATGTTATATTTTATAATACAATAATATAGTCTTCAACAATGCTTACCATGAGCCAGGCATTGTTCTTGGTGCTTTGCATATAAAAAACCACTTGAGTCTCACAACAAATATATGAGATACTGATATTATTTCCATTTCTTAGATGAGATAATTGGAGCACAAAGTTAAATACCTTGTCCCAGGTCATACAGCTCCTGAGTGGGACAGATGGCATTCAAACTCAGGTATTCTGGATCTTAAGTCCTTATTCTTAACCACTATGCAATTAATGGCAACAATTTTTAAATTGAGATGTTGACTTTTTAAAAAATGAAAATACCAAAAATGTAATAGTATTTGTATTGAGGCAGAAAGAGGGTTGGTATTTTTTTCTGGGCTCAGTTTCTCAGTTTTTGTCATTTTAAATTGCAAAATATTTAGGTTTGTAAATTCTCTTCAGTTGGCCGTCCTTGAGTTTGAGGTTGCATTACCTGTGCACGGGCGTCCTTCACCAGAAATCTTTGTGATGCTGAAGATGAATGACCACCGGGATCATAGTGAGCCTTGGATTGGGCTGACAAGGGCACCTGGCTCACACCCTACAGATACAGCGAAGGGGCACATGTGAAGGGGAAAGGAAGCTGTGTAGACAGAGGATTACAAGGTGAATGGGCTGGGCTTGTCTTGCCATGTTGTCGCCCAGAGTATCTGCCATGGCTCCCGTATAGTTGGCTTCCCTGGCTGCTCGTCTGTAAAGAATCTGCCTGCAATGCAGGAGGCCTGGGTTTGATCCCTGGGTTAGGAAGATCACCTGGAGAAGGAAATGGTAACTCACTCTAGAATTCTTGCCTGGAGAATCTGCATTTCTTAATTTAGGTAGCTCTCCCCAGTGCCATAAGCCTGAGGGTACTTGAAGCTATTCTTAAAGATGGTAATTAAAATTATCTGTTTTTATTTATTTAGTCCACACTGTGCAGCTTGCAGGATCTTAGTTCCCCAACCAGAAATTGAACCTGTGTCCCCTGCAGTGGAAGGGCAAAATCTTAACCCTGGACCACCAGCAAAGTCCCCAAAATTTATCTGTTTTAATTCCAAAAGCTAGTTTAATCATGCACAATATTCTGTTGGTAAGACCAGTCTTAGAGGATGGATTTGGTCAGGCAATGCTGGGGACTCAGGGCCCCCACTGAAAATATTCTGTTTGTCTACAAAATGTGACTGAACTGGTTCAATATTTAGATAAGAGACTGGCAGTCGTGGTGCTGGCTTTCCGGGTACCAAAGGAGGGATGTGAGTTAAAGGCATGTTCCATCCCGGCACGTGGGTTGGTAAGTGAGGTCACCTCCTGTCTGTGCAGGAACCCAGTTCATTTCTGCTCAGGAGCAAGAGTTTTTAAATTGCCAACTGAAGTAAGAGTTGGGTGCTCTAGGCATAAGGAAGTACAGCTCTTCAAAGAGAAACACTGAAAACATTGTAAACTGGTAAATATTTTCCTTCCTCTTTTTACACACATGTTTTAATTGGACAAGTAATTCATGGTCACTGCATAAAAATGTTGAAAGCCAAATTAAAAAACAACAAGCATAAAGCTGGTCATTTGATACACTAAATGTAACCACCATTACAGCTTTACTTCTGGACTTCTTATGCCTATATACAAAATATCACTTATTTTTTTAATCTCCTAATAAAGTTTGTTTCTAACAGTTTGCAGTCACCAAATTACTTAATTGGCCGATTTGAACGGAACTGAAGCACAGTCTCCTTACAGTTGCAACCCTAAACTACCCTAAGACGATGAGGTTGCATTGAATTGGCTTGGGGACGATTGACATCTAAACACTGAGTCTCTTGAACATGAACAGTGGATCAATCACAGATACTTGGCTTTAGAATGTTCATTTTTATTTATTACAGTTTACCTTCAAGTGGTATTATACCACTTCATTTAGTATAAGAACCTCACAATAATTTCTCCTCTCCCAGCCTTCATGTTACTGTCATCATATATTTACCTGTTATAAATACTACATTATTTTTGAACAGATTACTTTTATTATATTTTAAAGAGATGTTAAATAGTCAGAAAAGGTTGTCTGTCTACTCATGCAGTTATCGTTTCCAGTGTTCTTCATTCTTTTTGTGTAGATCCATGTGTTTATATTTGGTGTCATTTTCCTACTGCCTGAAGAACTTCTTTTTACCATTTCTTACAATTGGGGTCTGTGGTAATGATTTCTTTTAGCTTTTTCTTCGTCTTTCTTTTCTTGTTTTGCTGCACCACACAGCATGTGGGATCTTTAGTTCCCCAACTAAGGATTGAACCCATGACCCCTGTAGTGGAAGCACGGAATCTTAACCGCTGAACCACCAAGGAAGTCCCTCTTGCCTCCATTTTTGACATATATCCTCACTGGGTATAAAGTTTCAGGTTGACAGTTGTTTCTTTCGGTACTTTAAAGAAGTTGCTCCATTACTTCTCCATTGCATTGCTTCCAGCGAGAAATCTGCCATCATATTATTTACTTTTGTTCCTCTGCACATAATGTAGCTTTTTTCCTCTGGCTGCTTTTAGGATTTTTTCTTTATCACTCATTTAGAGCTATTTGATTATGATGTCTCTTGGTATGGATTTCTTTATCTTTCTTATGCTTAGAGTTCATTATGTTTCTTGGATCTGTAGATGTATGGTTTTTCCTCAAATTTGGAAAATTTTTTGTGTTTTCAGATATTTCTTCTGCCCTCCCCTCCCGGTTAGGAACTAAAGTTGAGCTTAAGCTACCAGCAGGCATCCCACAGCTCACGGATGCTCTTTTCATGTTTGTGACTCTTTTTCCTCTCTCTTTCATTTCAGATCATTTCTGTTGCGATTATCTTCAAGTTCACTGATCTTTCCTTCTGCCGTGTCTAACACTAATAATCCCATCCAGTCTGTTTTTCATCTCAGACACTATGATTTTCATCTCTCGGAATTTGGATTGGGTCTTTTTTATATCGTTTCTATCTCCACTTAACTTTCTGAACATATAGAATACAGTTACAATAAGTGCCCTTATGGCATTTCCTGTAAAGTCTAGCAACTTTGTCAAGTTCCTGGCAAATCTGATTGGTTGATTATTCTTTCTGGTTTTGGGTAGTGTCTTCTTGTTTCCTGGCATGCCTGACCATCTTTGTTTGATGTCAGACACTGTGATGGTTGCCTTGTTGGGTGCTGTACACTTTATATTCCTATAAATACTCTTGACTTTTGTCTTAGGCATTATTTGGCAACTTTGATCTTTTGAGGGTCTTGCTTTTATGATTTGTTAGGCAGGTCTGGAGCAGTGCTCCATCCGAGAGACTAATCATTACCCACTAGTAAATGTTTTTCTACTCAATGCCTTGGGAATTATGAGCTTTTCTAATTTGGCTAGTGGAAACAGACACTGTTCTTGAAGCCTTTCAGATGGCTTTTTCCCCTTTAACTTTGGGTGGTTTCCTCACACACGTGCTCTGATCCCGACTCTTCTGAGTGTCCCCGGGGGGCCATCTGCGGGTCTCTGGGTTCTTCTCCTGTGTTTCTCTTTCCTCTCGGGTGCTCTGTCCTGCAAAGTCCAGGCATGTTAATCTCCTCAGAGCCTCAGCTCTGTCTCCTCAGTTCAGTGAGTCTGCCAGGTGGTTCCCTATCCCTGCACCACAGCCTGGATGGTGAAGTCTCTCAAGGCGGGAAGCAGGGCAATCCGAGGGCCCGCCTCTTGTCTTCCCTTTCTCTCAGGGGTCACTTCTCTTCATTGCCTCACATCCAGTGTTGTGAAGATTATTGTTTGATAAATTTTGTCTGTTTTCTTTTTTTCATTGTTTCAGTAACAGCGGTCAAATCCAGTCTCTGACACTCTGTCTTGAAAAGAAGCAGAAGTCTCCTGATGCTAGATTTTCTTGGCCTCTTGATTTGTTTACTACTGGCTTTGAGGGAGAGCCCAGTGCCCTGATGAAGAGCACCGGCACTAGAATCAAACCATGTGATGCTCTGGTCCATCACTTCTTAGCTGCGTGACCAAAGCCATGTTAACCTGGCTCTGTCTCCCTTCTCTTGTCTGTAAAATGGGGAGGATAATGGTCATGGCTCATTGGATTTTTGAAAGGCTAAAACGAGATCATGCATTTAAAGCATGACGCAGTTTCTAGAACTTGGTAACACGTTCATCTTAGCTATAATTTAAATTATTATAAGACCCCAATAAATACTTGCCAATTGAATATCTACTCTTGGCCCAAGAACCATATGTGTCATCATCATAGGTGACTGGGACCTGGGACCCAGCACTGGCAAAGCAGGAAACCTCAGTGTATGCTCCCTGAATGAAGGTGTAGCCAGGAGGCCCCAACTCTCCGCCACCCATGATTGCTATTATTCTAGGGTTTTCATCTCCTAAATAACAGACCTGGTTTTTGTTTTTTTTTTTTTAATTTTTCAG
Seq C2 exon
GGGAAGACAGGAAGACCCCCAGTGAATCAAATAGCCCCTCTTCCTCATCCCTCTCAGCTCTGAGTGATTCGGCCAACAGCAAGGACGATTCAGACAGCTCTCAGAAGAACAAGAGTGGCAGTAACCTGCTGGTCATCTCTGTCATGCCTGGGAGCCAGCCCTCCCTGAATAGTGAGGAAAAGCCAGAGAAAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSBTAG00000012738:ENSBTAT00000016933:11
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.070 A=NA C2=0.708
Domain overlap (PFAM):
C1:
PF139091=zf-H2C2_5=WD(100=43.9)
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development