DreINT0013183 @ danRer10
Intron Retention
Gene
ENSDARG00000058985 | KCNJ6
Description
potassium channel, inwardly rectifying subfamily J, member 6 [Source:HGNC Symbol;Acc:HGNC:6267]
Coordinates
chr10:121868-135432:-
Coord C1 exon
chr10:134508-135432
Coord A exon
chr10:125303-134507
Coord C2 exon
chr10:121868-125302
Length
9205 bp
Sequences
Splice sites
5' ss Seq
CAGGTACCA
5' ss Score
7.88
3' ss Seq
CTCTGGGTTTCCTCCCTCAGGCA
3' ss Score
9.45
Exon sequences
Seq C1 exon
GCTCAGAATCTTCCAGAAGTCCAGATGGAGCAGGATGTCGAGAGCACCGTCACGGTTCGACAACCCAAGCTGCCCAAGCAGGCGCGGGACGACATCCCCAAACCGCTGCAGGAGCGGGAGCGCGCCAAGCAGAAGACCCAGCGCTACGTCCGCAAAGACGGCAAGTGCAACGTGCACCACGGAAACGTGCGGGAGACCTACCGCTACCTGACGGACATCTTCACCACGCTGGTGGACCTCAAGTGGAGGTTCAACCTGTTCATCTTCGTGCTGGTCTACACCGTCACCTGGCTGTTCTTCGGCTTCATGTGGTGGCTGATCGCCTACATTCGAGGAGATCTGGAGCACATCGGAGACAACCAGTGGACTCCCTGCGTCAACAACCTGAACGGCTTCGTGTCCGCATTCCTGTTCTCGATAGAGACTGAGACCACCATCGGCTACGGCCACCGCGTCATCACCGACAAGTGTCCGGAGGGCATCGTGCTGCTGCTGGTGCAGTCGGTGCTGGGCTCCATCGTCAACGCCTTCATGGTGGGCTGCATGTTCGTCAAGATCTCGCAGCCCAAGAAGCGCGCCGAGACGCTGGTCTTCTCCACCAACGCCGTCATCTCCATGCGGGACGGCCGGCTCTGCCTGATGTTCCGCGTGGGAGACCTCAGAAACTCGCACATCGTGGAGGCGTCCATTAGAGCCAAGCTGATCAAGTCCAAACAGACCAAGGAGGGCGAGTTCATCCCGCTCAATCAGACGGACATAAACGTGGGCTACGACACCGGAGACGACCGGCTCTTCCTGGTGTCTCCGCTCATCATCTGCCACGAGATCAACCAGCACAGCCCCTTCTGGGAGATCTCCAGAGAGCACATGGCCAAGGAGGAGCTGGAGATCGTGGTGATCCTGGAGGGCATGGTGGAGGCCACAG
Seq A exon
GTACCACACGCACAGATATCACTCAGCCTACGGCTACACTGATACAGATACATTCAGTGTTCGGCAAGATACTTATGTAGTGAGCTAAGCTATTAGCTAATCTACTTCAAACATAGCTTAACTATGCTATAAGCTAGGTCATTTATCTTTTCCTTTCCCCGATAATTTGATATTATGACATCTTTCAGTTGAACAAGCATGCATTCACTGATCTGGGATGATTTAAAGAGCGGTCACGAGACTCTAGATGCTGCTCGAGCCCAGCGTAACCCAGCAGTCATGCTTTAAAACACACCGAGCAGCACATGCTGGATTTATTCCTCAGGGTTTAATTGGGTTTTGAATTTATGTTTGGACTGGAATGCATTTACAGTAACCTCTGTTAGCCACAGCCTCAAACCTGACAATAAAAGACAAATTACTGTCATAAAGGTGCAGGATCAATCTGAGGGAAGGTGGCAGAAGCGTGCACTCACACACACACACACACACACACACACACACACACACACACACACACACACACACACACTGGAGAGAGCAGATGATCTTAAAGCCACAGTTAGTGTTCATGCATGTGCGTCTGGTCATCATTTACTCAAGCTCATGCCTCTTCAAACCTGCAAAACTTGAATATACTGTTTGCAGCGAGTGGATGATGAGGGTATTTTCACCTCCAGCACAGTCTGAGCTTCACCCAGAGAAACAGGAGCCCGCTCCTATCAGGACCCACAGCTCAAATATAGCTCAGGATCAATACACAGCTGTAAATGCTGGGAAATAAGTCTCCCAGAATCCCTCAGGAGTGCAGTACAGGACACAGAGAGGTCAGCCGCACGTCGCCTGCTGGACCCAGCTCTCAGCTTCAGGCTACAGGAGTATAGAAAAGTAAAGTGGATAAGTGTATAGTATAGTATAGTATAGTGTAGTGTAGTTTAGTGTAGTATAGTATTATACTGTAGAGATTAGTACAGTATAGTATAGTAAAGCATAGTATAGTACTGTATAGATTAGTAATAGTATAGCATAATATAGTAGAGTATTGTATAGTATATTATAGTACTGTATAGTTTGGTACAGTATAGTATAGGAAAGCATAGTATAGTACAGTATAGAAGTGTAGAGATTATTACAGTTAAGTAATACTATAGTTTAATATAGAATAGTATAGTATAGTTTTGTATTGTATTTTATTGTATAGTAGAGTATTGTATGGTTTAGCATAGTACTGTAGAGTTTAGTATATTATAGTATAGTATAGTATAGTATAGCACTGTAGGGATCAGTACAGTAAAGCAATAGTGTAGTATAATATAGTAGAGTAGAGTATTGTATAGTATAGTAAAGTACTGTAGAGTTTAGTATAGTATAGTAAAACATAGTATAGTATGGTATGGTATAGTATAGTATTGTATGGTATAGTATAGTATAATATAGTATTGTATGGTATGGTATAGTATCGTATGGTATGGTATAGTATGGTATAGTATAGTATAGTATGGTATGGTATAGTATAGTATCATATAGTATAGTATGGTATGGTATAGTATATTATAGTATAGTATGGTATGGTATAGTATAGTATAGTATAATATAGTATCGTATGGTATGGCATAGTATGGTATGGTATGGTATGGTATAGTAAAGTATCGTATGGTATAGTATAGTATAGTATAGTATGGTATAGTATAGTATAGTATAGTATAGTATGGTATAGTATAGTATAGTATAGTATGGTTTATATATTCTATAGTTTATCCCCTGGTGGTTGTAAATAGCAGTATATAGGCTGTATGTTAATAACTGATGCTTGTGTTTAGGGATGGGGAAGGTGTAGATGTTAATGGCTGATGTACAGTGGCATTTTGGCGACAACATAGTTTTGACACGTGGGTCTCCATAACTTCAACTTCTGCCTCTAACGTAGTGCAAGTTACGCCTCTTTATGTTACGTTGGTCTTGCCGTCCACTGGCAGACACTACTCCATGTTTCAGTTCAAGCTTTGTCAAACAGACACTGCAGATTTCAGAGCGCTTCACTGGAGTTTCCAGAGTTCACCCTCAGCTGATGAGTGATTATAAAGCGTGTTCGGCATGCTGTCCTGGGAGAGAGCCCTGAGCTCAGAAGATCCTCGAGCCTGGGGCCTCCTCCTGTTGGCAGGGCAAGAGGGGAGTTTGAGCTCAGGTAGATGTGGAAGTAAAGACTTGAACCAGTAAGAATAACTCAGCAGACAGAAGCAGTGCTGTGGACAGGTCTTCATCCTCTTGCTGCTGTTCACATTAGCCTGTTTGGTGATGTCGTTCAGCAGAGCATCGCTTTACAAGCACCTTTCACAACAGTGGAGATCCGTCTGTTCACACTGAGGGAGGATCGAGACGCTCACACACACAGCATCATGTGTGTCAGTGGGAAACATCCGCAGTGTTTGATCTGCGCTGTACGCATCGCGCATCATTTCTCTGATGTTTTCCAACGTTTGTGATCATGGTTAAGCTAACGTGAGCCTGTCCTGCTGTCTGAGTCACGAACACAGAGGCAGGGCCGCTCAAACGGACCATCTTCTACATACAATTAGCCAAAAACAGAGACAGAGCGCAGCGCGTTTGCTTTCGCTGCAACTGTGATGCTATTTTGAGGGTTTGTGAGTGTGGTTGCCATGGCGACGGCGCAGCATTAGGAAAACCCACTGAGATTATATAACAGCGTTATCTAAACCACACGGCCCAGTGCTACTGTTATGATCATCACTGCTGTTATGATGGTGATCGCCTGTGATTGATCTGCCATCGCATGTGTGTGTCCTGCACAACATCACATCACTATACTCAGTAAAGCCGTGTTTATTTGAGGAGTTTAGCATGTGCTCATTACTGCTTTGCATTTGGAGCTATTATGCAGCTTTATATGGGGTTCAGCAGTGTGTCCAGCAGTAATGCTCAACATGAGTGAACTGTGTTTATTATAATCAGACTTGATGCAGAATCACTGTGATCAACATTCCCCCTTTGTACGTGTCATCAGAGAGGGAAAGCCCCGCCCACTAGTGCCCATCTCATTAGCATGTCCAGCAGGCCTGAGTGAAAAGCAGCCGTCTGTCCATTAGCCATTAGAGTGTTTGAGCTGCTGAAGATGATGTCAGCATAGACTCAGAGGATTATAGATGGGATGGACTTCTCCATTTTGGCATCAGCTGTTGTGGTCGTCACCTTGCAGCAGCTGTACACACAACAGCAGCCCGATGATGGAAGTGTTCTGGGGTCATAAGGGAAAACACAGTGTGAACACAAACCAGCCGAGAAGGTGAAAAGTGGGGACAATCCAACTTAGATTCAGACCAGGCAATCGAGCCAAGTGTGAAAGCCCCCTGAGACTCCCTCTGTCAACATTATTCATTTAACCAAAGTAAAGTGCAAACCAGGGTGGCGCAGTGGTTATCAGTGTCACCTCACAGTAAGATGGTTGCTGGTTTGAGTCTCGGCTGGGTCAGTTTGTGTTTCTGTGTGGAGTTTGCATGTTCTCCCCGTGTTGGCGTGGGTCTCCTCCGGGTGCTCCGGTTTCCAAACACATGTGCTGTAGGGGAATTGGGTGTTTTCCATTGCTGGGTTGCAGCTGAAAGGGCATCCACTGCGAAAAACATATGCTGGAATAGTTGGTGGTTCATTCCACTGTGGCAACCCCTGATAAATAAGGGACTAAGCCGATAGGAAAATGAATGAATGACTGAATAAAGTGCCAGCCAATACAGCGAGTGCATGTGGATGCTCCTGTCTTACATTCCTTACTTCACCACTGACCTGACTGAATGATCTGAGTGCCATGATAAAAGCTTCCACAATTAATCACAACAAGAATATCTGATACTGACAGCAGCCTGAACTGGAGCAGAGTGCAGGAAAACTTTCAGAGGCATTCCTGGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTGTTGTTCAGCATTACTGGCTCAGGGCTGCTTGTTATGTGTTGTTTCTAGAGACGCTCCTGCATGTCATTGAGCCTGTGAGGTCGCGGGTGCTCAGGGCATGACTGGAGAACGGGCACAGCTGCTGGCGCATTCACAGCTGACCTGTTGCCATGGTGACAAGACAACATGCACGAGCATGTGTCATCGCAACACACACACACGCACACACGTGGACATGAGCGCATGCATTCACAGCGCTCCGTGTGTCCTGCAGCTCTGCAGTACAGCTCATATACAGCTGCTGCCGGCCGATAACAGCAGCCGCTCACCTGCAAACAGATGAATGAAGGTTCTCAGTGTCAAAGAAACAAGCAGGGCTCTAGCTCACCGACTCACCGACTGGTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCTGGTCTTGGTGGTCCCGAAGACAGTTTTTTTGTATAATGACACTGGTATGACCTAGTTTTACTCTACTATGGTGGTTTATGAGGACATGATGTCTTTGCATTCTTCATGAGGTGTGTGTCAGTGTCGGCGTCAGCCACAGCGAGTGCTTTACACATGCGCTTAATGCAGAAGCATAAATCCTTTCCCCTTCCCTTCCCCGTACCCATAGCCCTGGTTTTGCATGTTCAGGTGAAGGGGTCAGGGCGTCCCAGTCTCTTTATTGAGAAGGTATAGGGCTAAAGAAAAGCTTTAGATAGCCCTCGAAGATTTTCCAGGACCACACCAGACACCAAGGGGAATGAAAATCATATAGAGTATTGGGCCTAAATGTGCCTAAATGAGCTCTTAGACCTTTCCAACAACATATAGTTTGTGATGATTAGATTTAATTAGGATTTAATTGTACAAAAGTGATGTGAACTTAAGGGTCCTGCTGGCGGGAGCGTGACAGATATTAGAGTAATGTTATTTATTCTGAACATTTATAAACGATAAAGCAATGCACTTAATCATTTATATATATGTATATTTTATATTTAATACATATATATATTTTGTTTCTTTATGATTCAATAAATTATTTAGTTTAAAAGCAAAACTAAATATATTTAAGCAAAATAAATAAATAAATAAAGGATTACAAGTTAAAAAGTGAAGTTAAAACTAACTAGGGGTGTCCCGACCAGGTTTTTTTGAAGACGAGATTTTGAGTATCTGCCAGAAGCGAAAGCTTATCCAATTCTTCTATAAAGAATAAAGAAGAGTGAATAAACAGATCCGGGATGTTCCTTATTGTTTATTTAATTCACCTTATTTTACCATTCAACAGTTCTGTTAACACACAGAGCACTTCTGTGAGGAAGCTTCAACAATCCAGTCCTAAATAACAGCAGTTCTTCACTTTTGGACTTCAGTGCAGCAGTAAATATAACAGAATCTAATATAAAAACAAACAGCAGCTCAACGTAACATACCCGGCAGGCAATCCCAAGTGGACATCCCTCTCAGTCTGCTCTGGCAGTGTTGTGGTCATCAACATTTATAACACCTCTGGACCGCAGACATACTCGCGCTTTCCGCTTCAAGCTGCTTCAGTGTTGACCAATAGCGTCTCTGCAACACAGTGATGTCATGCTGCACGCGCTGCTGCTGTCTGCTCAAGAAAGAGGTCCAACTCTGCGCCACCGCACAACTATAGATGTGTTCAAAAATAATGAGAATATATATATATATATACAGGTGAAGTCAGATTTAATAAAACCCCTGATTTATTAGAATCCCTGATTATTTTTTTCTCCAATTTCTGTTTAATGGAGAGAAGATTTATACATGTCTATAGTGTTCATAACTCATCTCTAATCACTGATGTGTTTCCTCTTCTCCATGATGACAGCACATAATATTAGACTAGATATTCTTCAAGACACTAGTGTTCAGCTTACAGTGACATGTAAAGGCTTCACTAGGGTAATCAGGGTAAAGTTAGGGTAATTAGGCAAGTCATTGTATAACAGTGGTTTGTTCTGGAGACAGTCCAACACTAATATTGCTGAAGGGGTGAATAATCAGAAGATTTCTGATTGAATCATGAAGAAACTAAACTGACTCCATGAATAATAAGCGTTTCTTACTCTATAAAATGCAGTATACCTATGGAGAGTCCCTGTAAACCACCGATACCAGTGTGTGTGTGTGTGTGTGTGTGTGTCATGAGTACAGATAATGCGCTGATCTGAGTGTAATGCAGCGGAGGCTGATGAAGCGCCGTCTGAAGCATCGTGATGCAGCTCCTGCCATGATTACACACGACAGACCGAGACACGCGTTATATAAACGTGCTGTTTGTGTGTGTGTGTGTGTGTGTGTGTTCCTGAGCTCTGAGAGCACTGAGGGAAACACACACGAGATGTACACAGATGTGACACTGCTGCGGTGTGTTGATGGTGACTGGAGACGGCGACCTTTGACCCCCACAGGCTCTCAGGAGCCCTCGCTCCGCTCTGTGATTCTGTCACACACTCACACACCGCAACCAACATGCCTTCCTTGTCTTAATTCAAGTTTAAATATCTGATCGTTCCTAAATCAAGAAGCCTTTTCTAGACGGGAGTAAAATATAGTGTTGTCTTCAGAATTGAGCAGTAAAGCAGAGCAGAATGATCTGACAACGGGGGAAGAAGAAGATCTTATTTAAACACAACACCTGGATTATTCCCCATTATCCCCATTTTATTTCATTAAGAAACTTAATTGTGACTCATTATTTCTGAACACAACACCACATTATTCTGCTTCTCTAACGCTTCTTGATTTTAGAGTTGTAGATATTCAGACTATGAGTAAGAGAAGCTCAGAGTAAGAGCAGTGGTGTCTCCGTGTGTTTCAGCTGCTGTGAACATGTCTGTAAGCTGAATGTTAAATCTGTCTGATGTTGTTTTGGGGAAAATGTTTTAGGGTAACGTCAGGCGTACAGAACAGACTGTGTGTCTATCATGAGCGAATATGCTGAATGTTGGTTGTTCTCTCCCACACACACACACACACACACACACACACACACACACACACACACACACACACACACGTGCTCCTCACTCATTATCTGAGTCATTTCACCGCGGCGTGCTGAGATCATCAGGAAACTGTTGTAAACAAGAAGAGTTTCTCTCCGACAGTAAAGGAGAAGTGTTGTGTTGTGCTGTGTGAAGCTCCTGATGGCAGCGGCTGCAGTGAACATCTCCTCAGAAACATCCAGAGCTCCTGTGAACGCTGCTGCAGGGTTGAGGGTTGACTTCTGCTGATCTCTGATTACTCAAGACCTGATCATGAAGGACTACAAATCTACAGTTCTTTCCTCGTAAAATTACCATCAAATTCAGGGCTGTTTACAAATCACAGATCATCATCGGACACGCTCTCAGAGTCTCCCCTGGGTTTATGCTTCAGGGCTTCTTGCTACCTGACATGTTTTACACTGCAGAAAGGCTTTTCTGTTTTCAGTTTTTGTTTTGTTCCTAGTTCAAGTACAGCGGGGAAATAAGTATTGAACACAGTTTCGCTCAGAGAACGTATTTCTAAAGGGGATGTTGACTCGAAATTTTCCCCAGATGTTGTTAACAACCACAGAAGTCCATATGTATGCAAATAAAATTAATCTAATGTGTTTACAGATGAAGTTCTGTGTAATAAACTGAAATGACGCAGGGAAAAAGTGTTGAACAGATGAAGGAAGGAAGGTGTAGTTGGGCAGTGAAAGCCCAGACAGCAGCTGAATCTGTCAGTAGTTCTTCAGCAAGCCTCTGCCCTTCCTCTGTCAATGAAGATCAGCTGCTTCAGTCCAACATCTACATCAGCAGGAGGATGAAGATCAAGCTATTTCAGCAAGACGATGATCCAAACACAGCCGAGGAGACTCTCAGATGCTTTTAGAGAAAGAAAATCAAGCTGTAGAATGGCCCAGCCAATCACCTGACCCCAATCCAATAGAGAATACAGAAAACAGCTCAGATCTGATAGACGAGACCCACAGAAGCTTCAAGATTTACACACTCTGATGAAGACTGAGAGAAACTCACACCTGAGCACTGCAGGAGGCTTCATTCTCCATATGAGACACGACTTTAGGCTGCCGTCATTCATAAAGCCTTTTATATACAGCATTAAATATGTTTCAGTGTTATTACACAGAACAATTTTTCAGATTCTTGTTTTGTTTTTTATGTTTGTATTTTTGGGGTTTTTACCTAAATCTGCTTCAATTCCATTAATAGCCTCTTTAGAATATTTCCCCCCCAAAATACATGACATCTTCAGTACTCATTTTGCCCACTGGATTCAACCATTCTGAAATCGAGAAGCGTATATAATATTGCTTTGACGTAAGATTATTCTGCTTTCCCCTTTGTCAGATTATTTTGCTTCTTTTAAGGGAGAAACTTTCTTCATTGTGCCTCATTATTTCTGAACACAACACTATATATGTTTTGCTTGTCTAGAAATTCTTCTTAATTTAAGTATTTTTATATATTTGCACTAGAAACAAGTGAAAAACTGAGTAAGAGCAGCACTTTTGCAGTCAAAGTTGTGTTTTCTTAAAATCTGGCAGCAATATTTGCACAGTATGTGCCTCTAAAGACAGATTATGGGCAGATTTATAGCAAGAGATTTATATTTATACAGTATGCATTATAGACTGTGCTAATCGTGGGTTCTGTAGAAAAGAATCACTTTGCTTTTGTTCACTGAATTTCTATAGACCTTGACTTGACCAAAAAATACACATCGCAACAACACGTAGCACAAGCTCTGTGATTGGACAGCTCGGTAGCGTTGATGAGGGTGGGCGGGGCTGAGAGCCATGGGGGTGGAGCGAGTGTTTACAAGTGTGGAGTCCTGTAAAGGAGCTCCAGATGGAGACGGTTGTGTTGTGTTCACCTCATGATTAAAGTTATTGCACATCTGCCGGTTCTGCTCTGAATGAGCCAGTTTGAGTTAGCATTACAAGTATTTCTGATCTAAACAAAACAGCCATGAAGAAACACAACACAGAGGAATAAATACACAGAAATACATAAACCAATAATACATAATACATAAAATCACTGGGTGCAGAAGTATAGGTCAGCCGTTATTGCTCAGCCAGAGCTCATGGAGCTGTAGAGGAGTCATTCATCATGCTAGAATACAGATTCTGTTCTGTTTCCTGTCTCATTGTCGTGTTTCCTCACCTTGGGCTCTGGGTTTCCTCCCTCAG
Seq C2 exon
GCATGACGTGTCAGGCGCGCAGCTCATACGTGGCCAGCGAGATCAAGTGGGGTTACCGCTTCACGCCAGTGCTGACGCTGGAGGACGGCTTCTACGAGGTGGACTACAACAGCTTCCACGAGATCTACGAGACCAACACGCCCAGCTGCAGCGCGCGAGAGCTGGCCGAGATGACGGCGCGCGCCCGCCTGCCGCTCACCTGGTCGGTGGCCAGCAAACTGAGCCAGCTGGAGCCGCAGGAGCCGCCGGAGGAGCTGACGGAGAGGAACGGAGACGTCGCCAACATGGAGAGCGAGTCCAAAGTGTAGGAGGACGGGAGAATCTCTCCTGATCTCTGCGCCACTGCCGCCGCACCATTGGCTGGGCTCAGAGGTCAGAGGTCAGCTCAGGAATGCGCCCCGAGGCGGGCCGAGGTCACGGACGCCCCCATCACACGCACTTCTCTTTTTCTGGCTCCAGGGCGTGACGCAGGTGAACTGGCGGGCCACTGCATGGTTTCAGAGACCAGTTTTTTTCTTAAAGATATGAAATGATATTTTCAGATTTGTAATTCAGAGATGAAGACCTCTATATGTATATGAGCATATATATAGATCTATTCTAGGGCATTTGCATTTGTATTTTTTTGTATATATATATATATATCTGCGTTTGGTTTGAGATGTAAGGTTGTTTGATACGACACGAGTCGCTCCACGTCTGTATATTCTGCCTTCTGGAAGAGCAGCAGACATATTTATCCACGCATGAACACTCGATCCCTGTAGTCCTGCGACTCTGATGTACATATTTAAAGTACTGTCGGCCATACATGCAGGAGATCCCCGTACTGGATGCAAACCGGAGGCTGAAGGCGGTGCGGTTGCGTTGCATGGGATTGTGGGGCTGATGATGGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGCGCGTGTAATCGTGCATGTCTGCTCCAATAACCTTCCGTACCGTCATCAGGCCATGATCTTTCTCTCTTCCTTTAAGTCATAACTGGATTTGAACTTCAGCGCGCCCGATGCAGCCGAGCGCTTCTGTGTGTGTTTGTGTCGTCAGACAGAGCAGCAGATGTGTGTGTTTGACCACGAGATAAACACCGCGCGCACACGAGACCAAAGAGCCGAACCCTCACGTCACCTTTGCCTCGACATTGATCAGCACATGAGCATTGCCAATGAAAACAAGGCTGAGACGGGGCGTCGTCCTGGAGGCACAACCCACATGAGGGACCACCGCTGTGCTTAAATAATTAATGAGAGAAGCAGATGCAGAGAGAGAGATGTAAACCAGCTTAAATATCTCGACCCGTCTGTGTGAGCCGTCTGGAAGTGCTGTCGCCAGACAGTCAAGTAGTGAAAGAGTCTGACAAGACTTCATACAGCTGACAGACGGACGCTCGCTGACCAGCTCACTAGAGCGCTCACAGTCTCAGATCTGCATTGAGTTTAATAAAGCAATGCCAGGGCAGTCTTTCCCGTTTCCTCTGGCGTGTTCACATCATGGTCGTTTACGGCGGAGTGATAATCACAGATGAGCGATCATCATAGCATTACATTTAGCAGATGCTTTTATCCAAAGCCACTTACAAACGAGAAAAGCACCAAGCGGCTGATCTTAAAGACGCAGTGCTCCCAGGAAGAGCCAGCAATACAGGCTAGAGTAGATGAGGAGAGAGGAAACACCTTCACAGAGGAGATGAGCTTCAGTTTTCTGTTTGGGATTGGGGAGATCATTCCACCAGTGAGGAACCGTGAAGGAAAATGTTCTGGAAATTGATTTATGCCTTGTTTCCACAGAACCCTAACCCTAATTGTGTTCACACGCTCAGCAGAAATAAACTCTGATTGGCTCCAATGATCATCCACAGTGTTTAAGAGCTCAGGTGTTTGAGGGAAATGGACGTTTATAAAATTTAATTACTATTCAGTACTGAAATCAGTATTTCTGACAACACTATGTGCAGTTGATTACAGGAGAAACACTATGTCATCAGACGATGGCTCCCAGTGATGTGGTGTAAATTAGGAAGAGGAGAGGTCCAAGAACTGACCCCTGAGGAACTCCTGCAGAATATATCTAGCAGAGCTGAAGATCCAGAGCCGTCCACAGGGCTTCAGTGGCGGACAGTAATGCGGGATCGTTCACTTTTTAACAGACGCTTTCATCCGAAGTGACCCACAAGTGAGACAAGAGAAGCACTTTACCTCCTGCTGAAGCAGTTTACGATTGTTTTTCCACATTCAAGCAAACAGATTGGAAAGAGTGTGTACTACAGGTGGTTTGTCAAGCCCACTCACCTGTGAGGAGCACACTCAGAATTGCAAGACGTTTTTCCATCTTGGATCAGTGGAATCGCCACTTTCCAATCCTCGATGGTTTGCGTCCGGCTGCTCTGTTCAGTGTTGTTGCAGTGATTTGCAGATGGACAATGGCAGCAGGTTAAGGGGTTTGTTCAGCAGCCTTGTTTTCATTTGCATCAAATAAGATAATGCATGCATCAAGAGAACGCTCCATAACAAGTCTGTTCAATACTAAAGCCCAGAGTATACTTCTGCTGTTAATTAGGCGTGCAGAGCTCAGTACACCACTTCATCAGAACACTTCAGAACTATATTGCACTTGCACATGCCCATTTGATTTTTTGCACTTATTAGTTTGTCCACAAGGGGTCATCACTGAGCGACTGATTCACTGAACAACAACAGCAAACTACTGAAGACTAAAAGAGTGTTGTGTTCAGGATGAAGACCTTTCCACAGCTCAAAAGTGCTCACACACACACACACACACACACACACACACACACACACACACACACACACTGAACATGAAGTATACTCTGGACTTGAACTTACATTTGCCAGAGCTCAGATTGCGCTGTATCGTGTTCAAGGGATTTACAGGACCAGGACTCACAGACATCCCTCTTATGGCCGTGTGTTCTTGAGTCTGGCCGATGTGTCTGTAGATCCGCACATCTGTGCCCGGTTGAGACTGGAGTCCTCCGCTGATTCTGCACAGTGACAGCGCATCGCTCCAGCGCTCCACGATTGATGAAGTGCCCTTTAAAGTGCCCTGCTGATACGAAGCCATCACGTCACGTCACGTCAGAGGCTTTCCTTTCTTCATCTCTGTTGAGTTGGGGAAATATGAAATCAGGAATACCCACATTATATCGTCTTCAGATCCGTCTTTAAAGCTTATTCCACAAGCCATAATACGGCACATTACACACGGTGTTTAAACAGATTCAGCGCGCATACGACAAGCGACTCATTCTGATTTTCTTGTTGATTTAGATGATTACTCTGTCGCAAGAAGCTCATAAATAAACCATATCTGAATATTCACTTGTGTTCCGTCTCTCTCTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGCGTTCAGTGAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSDARG00000058985:ENSDART00000081978:2
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.037 A=NA C2=0.265
Domain overlap (PFAM):
C1:
PF0100715=IRK=PU(77.3=86.0)
A:
NA
C2:
PF0100715=IRK=PD(22.4=72.8)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]