GgaEX1020187 @ galGal3
Exon Skipping
Gene
ENSGALG00000002350 | DNAH3
Description
NA
Coordinates
chr14:15721473-15723601:-
Coord C1 exon
chr14:15723496-15723601
Coord A exon
chr14:15721824-15721953
Coord C2 exon
chr14:15721473-15721484
Length
130 bp
Sequences
Splice sites
3' ss Seq
ATTTTCCTTTTTCCTGGCAGGTC
3' ss Score
12.11
5' ss Seq
TTGGTAAGT
5' ss Score
10.47
Exon sequences
Seq C1 exon
GTGTGGTATGATCTATATGGACCCACAGCAGCTGGGTTGGAAGCCGCTGAAGGATTCCTACATGCATACACTGCCTCCAAACCTGCAGGATGAGCACCGGGAGCTG
Seq A exon
GTCAACAACCTGTTCATGTGGCTAGTTGAGCCCTGTTTAGATTTCATTCACCATCATTGCAAAGCCATTGTACAAACGTCCTCTATTCATCTGACTTATAGCTTGATGAAACTGTATACTTGTCTGCTTG
Seq C2 exon
CACTTTACACAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000002350-'45-46,'45-44,46-46=AN
Average complexity
A_C3
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
PF077289=AAA_5=PD(0.7=2.8)
A:
NO
C2:
NO
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]