GgaEX7010741 @ galGal4
Exon Skipping
Gene
ENSGALG00000026986 | KIAA1324
Description
KIAA1324 [Source:HGNC Symbol;Acc:HGNC:29618]
Coordinates
chr26:1131372-1131992:+
Coord C1 exon
chr26:1131372-1131521
Coord A exon
chr26:1131634-1131722
Coord C2 exon
chr26:1131815-1131992
Length
89 bp
Sequences
Splice sites
3' ss Seq
ACTGCCACCACCGCTCGCAGAGC
3' ss Score
5.9
5' ss Seq
GAGGTATGG
5' ss Score
8.98
Exon sequences
Seq C1 exon
GGGTCGCCTACACCTCCGAGTGCTTCCCCTGCAAACCCGGCACCTTCGCCGCCGCCGCCGGCTCCTCCTCCTGCCAGCTGTGCCCCGCCAACAGCTTCTCCAGCAAAGGGGCCACCGCCTGCCAGCCCTGCGAGCCCACCGCCTATGCAG
Seq A exon
AGCCCGGCTCAGCATCCTGCAAGATGCGCCCGCCCTGCACTGATAAGGACTATTTCTACACACACACGGCGTGCGATGCCAATGGGGAG
Seq C2 exon
ACGCAGCTGATGTTTAAGTGGGCAGAGCCGAAGATCTGCAGCGAAGCGCTGCCCCGCGCTGCCCAGCTGCCCCCCTCGGGGCTGAAGACCCGCTGCCCCCCCTGCAACCCCGGCTTCTACAAAAGCAACAGCAGTGCCTGTGAGCCCTGTCCCTACGGCTCCTACTCCAACGGCTCTG
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000026986-'6-9,'6-8,7-9=AN
Average complexity
A_S
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=0.000 C2=0.000
Domain overlap (PFAM):
C1:
PF076998=GCC2_GCC3=FE(84.7=100)
A:
PF076998=GCC2_GCC3=PD(11.9=23.3)
C2:
PF076998=GCC2_GCC3=PU(66.7=36.7)
Main Skipping Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
CCTACACCTCCGAGTGCTTCC
R:
GCCCACTTAAACATCAGCTGC
Band lengths:
167-256
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]