GgaINT0017182 @ galGal4
Intron Retention
Gene
ENSGALG00000001916 | SLIT3
Description
slit homolog 3 protein precursor [Source:RefSeq peptide;Acc:NP_001183971]
Coordinates
chr13:4026774-4039991:+
Coord C1 exon
chr13:4026774-4026904
Coord A exon
chr13:4026905-4039836
Coord C2 exon
chr13:4039837-4039991
Length
12932 bp
Sequences
Splice sites
5' ss Seq
TAGGTAAGA
5' ss Score
9.14
3' ss Seq
TAATTCTCTTTTATTTTTAGTGT
3' ss Score
8.37
Exon sequences
Seq C1 exon
GTAGCAACAGACAAGGACAATGGCATCTTGTTGTACAAAGGAGACAACGATCCTTTGGCTCTGGAGTTGTACCAAGGACATGTGAGGCTCATCTATGACACACTGAATTCTCCACCTACCACAGTATATAG
Seq A exon
GTAAGAATAGTTCCATGTAATCTGTTTCTCTGATATTGATATTGAGCATTAACTTTCTGTACTGGGACAGAGCAGTAACTATGCAGGGGCAGGATGAGAGCATTTCAAAATAGGAGAAGAGCTGAATTCCTCTACAAGGAAATGTTTTTAGAAGATCTCTTAACTGTATCAGTAGTAACCATGCAAACCATGAGAGAACACAATTTACATAGGTAGATTATAGAGCATTTTCACTTTCAGACACTTGACTTCTGGGGATGCCAAATTCAGATTTTTTATTTACTAGTCATGAGAAAAAAAAACAAGTGTAAAAGCAAAGCCCACGCACCAAGGGAAAGAGAGGCATGCTACTCAAGTCTTCCAGTGTACCTTTCAGCAGATCTCTCCCTGCATTAACTGTCTTCTGATTATTTTTTAGCTGTGATGCTCCAGTTTATTCTGTGTAAATGTGTCCACACAAAGCCCATTTAGGTTCATTGCAGTTCCTTTGCAGTGTGCATGCAGAAGAGGTGGATTTCTTAGTCTGCCTCGCTCTCTGGGGAAGAGCATTCTATTAGAGTGACTATATGGGTGGCACTAAGACTGACCATGATTTGCCCTGTACTTCTACTGAAAAGTTTTCTCAGCACTTGATAAAGCTTCCTTCTACCTGAGCATGGTAGCTGTGCAGAGTTTTCTTTAAGGAGAGCAGTGATATATTTAAGAAAACAAAAGAATTCTTTATAATAACAAGTTGGATAATCCCAATGCAGGAATGTCATCAGAAGGAGCAATGGCTTGTCCGCTGTAGGAATGGAGAAAGTGGTTTCTTAGTGACTTTGACTGGCTGGACAGGTGTGAAAAATTTCCCTATGTGTGGCTGCTAATCCTAATTGATTTCATGTTAGAGCAAAGCCAAAGTTGTTAAACAGTTTTACACCACTAATTAGAACATAGAAAAGCTTATTATGTGTGGGCAGCACATGAGGTGACAGACCAGCGTGGATGCTTGCTCTCTGTTGTCACGGGCAGAGTGGTGCAGTGACAAGAGCTGTTGCCACCATCAATGACGCCTTACAGATCTGCTGCCTTCTGGCAAAGCTCCCAGAGATGGCAAGTGGCAGTGTCCTCATTATTACTGCGCCCTTCATATTGATCAAGGAGGAGGTCTCCATTCAGACTGACACCTCATTAACATAAGATTAATGGCCTGTTCACTGCATTTTGTACTGTGTGATCTGTTGAGATGGGAAAGTAGCTGCTTAATACGATGCCCTTTCCGAAATGTCACTCTAATCTTTTATTAGATGAAGGACTGGAGCAAAATGGGATTAGCATGGAGCTTGATGGGAAAAGATTAGGTCGATTGAGAAAAACTACAGCCGAAGAATGTCAAGAAGGGCCTCTAAATAGATTAAGAGACTTGTTTTCCTTAAGGACTGAGGAAGCAGGAGGAAAGCTGCTTCTCCCTTGGGACTTAAGGGTAGAAGGTGTGAATGGATCTGGTTTGACCTCCCTGCATATCCTGTTTGACTTTTAGCTAAGGGCATAAGCTGTGTTTGACTACATAACTTCCAGCTTGGCCTTGTGTTTTCACAGGAAAACCCCAAGAATTGGAAAGTCCCGTATTTCTTTTAGCAGCTTGGACAATGGGCAGTCATTTCCATTATTCAGGCATTAGCCATCATTTCTAAGTTGAGTTTCACTAATTCCTTCTGGAGGTTTTAGAGGCCAAAATATCTGGTACTGGCTTTCATGAGTTCATCTGTACTTTTAATTGCATGGAACTGAAATGAATATGTGATTCTGTGCGGTGCAGTTTATCTAAATCTTTGGAACCAAGCACCTCTTCTCTGCAACTTTTACATTTACTCCTTTTTTTTTTTTTTTTTCATTAAAAATAAGGTTCCCAGGAGAATCAGAAACTTTTAAATCTTAGTCTCAGCATTGCTAATACTGTTTGCCTTCTCTATTACCTGCACCTTGCTCTCGTGTTTAGATGCCATATCGAAATCTCATCCTCAGCAAAAGCGGACTGATAGTCTTCGAAGTTTGCTGAAAGACAATTAGATTCATTTTCTCAGGCAATATCAGGAGCTGCTGTTCTCCAAAGGGATCCACTCACCAGAATAGATGAGCAGTGCTTTGGCTGTTGCTTGCCTCAGAAGCATGTGCCAAAAGAGTTAAAATACTGACTGGTGGGAACTGTGCCAGTTAACAGCTGCAGGAAATCTGCTGACTGACCTGGTCCAGTGTTGTAACTGAGCTGTTTTACTGGTTAGTTCAGGTACTCCTGTGATGGGGTGTGGGAAGTCACTGGCAAGCCACGTTATCTGTAATTCTACATCAGGGTCTCCACTATGAGATTTATTAATAGTACTTAAGAACAGTAAAATTAGCAAAGCACTTGGCTAATTCGCATGATATCCTGTAGGGATAAGATTAAAACCTGTTACCAGATGGGTTTGGAAGCTAGCAGCAAGTACAGCATGTGTGGTGGCAGTTCTCAGTAGGGTACAGTGAGGTATGCAGGAAGGATGATGTACACGATAGGACATTGCCATGGTGCAGTTCAGCACCATGTGCTCTGAACTTACCTGCTGTAGTATATTCTGCAGTTGGCCTTCCTTTCCGAATTATCCTGAGAAAATGTTTGAGGACAGGAATGTGACATAATGGTATATTCCTGGTGTGCCAAGAAGCAGTTGATGTTACCTGCTTTGTGAGGACCGGCTCCCTCTGGCTTTTGGAGCAGACCAGTTCCTGTGTCTTAGTTGCTCTTTTGAGCAAATTTAAATAGAACTACAGGACAAAGTTAGTCTGGAAAAGCCCAGGTTTAATTTGCTCTGCGTTGAGATTTACTTTACATATATTATTCATGTTATGCTTGGATGGAAAGGTTACAGTTGACATTGGACTTTTAGCATAGCAGTATAGCAAAAAGTTGGAAGAGACCTTCAGAGATTTTCTACTGCAAGCGCCTGACCTCTTGAGGGCTAACCAAATGTTAAAGTACGTTATTGAGAACTGTCCAAGACTTCTTGAACACTGACAGGCATGGGAGATCAACTGCCTCACAAGGAAGCCTGCTCCAGTGTTTGACCACTCTCGTGTAAAAAAAAATTCATTATATCTAGTCTGAACATCCCCTGGCACAGCTCTGTGCCATCCCTGTGCATCCTATCAGCAGCAGTCATTCTTTCACTCTAGTCAGAATAAAGGTCAGCAAATGTCCAATGGGAAGGTTTACCTAAAATACATTCTCATTTATCAAGTCAGAAAGAAATACAAGTTCATGCATGACTATGCAGTGATTGAAAGTGCCCTTTTAAAAGGAAACCTGACTGCTCTGTTACAGGAAGTCCTCACTTGTAAGCTGTGTAATAAGGGCTTCCTAAAGCTCATAGCAAACACGTTATAGAAGATCCATTTTTAAAGTAGGATTTCTACTTGTTGTTTCTTTTATTCTATTTAATCACTCTATATATAACGAATTATCAAAAACAATGCATTTTGGTACTTTTAGTTTTCAGTCATTGAAATAAGTATCTTCCTATCTTCTATCAGCTTCCTGTTTTCAGTCTCTTTTGCTACAACTGTTCCTTGAACCAAAACCAAAACCTTACCTGCAATGTTTTTTTCCACTGTAGGTTTTATGCTGTCACACTATCGCATCGATTTGAATGCTAAATTGATCCTTCCTAATAGAAATGGGAAATAGAAATTTGACAGAAACTACCAAATCCCTCCAGAGTTCCCAGATTGCTGTGTTGCATACAGACTGTTGTAACTGCTAAACGGAGAGATGCGGATATCTTTGGTGTAAAATCATGTTTTCATGCAGGCTTTCTGACAGCAGTGAAAAAGGAGGCAATCAGGAAGACACCAGAATTAATTGTGTTTGCCTTTCTGCAGAGCCTACGCCCAAATTACATTACATTTCTCTGTAGAAGTATCCTTGCATAGTCTGTTTTCAAAAATGCTATATCACGAGAAATATTTCTTACAGATTGTATCATGCTGTTCTCATGGTCTGGCTAATTCCTACGTAGCATAGATGGATGTTCTTGTGGTTAGAGCACAAAGCCTGAAGTCAAGGGAGTTTACTGTATCTGCCTCATACATGATCATGTGGGATGACAAATTAAATCTGTTTCTTTGTGCACAAAAAGTACAGAAATGGGCAGAAGTGTTTCAGAAATGTGCTGTGTGTCCCCAGGGGACGAGATTCTGTCTCCAGCAGGCTGTGGCTGAAGTTCCTAGCCCAGTACCTGCCACCTGCCTACTCTTTTCCACATCAGCTGGCCTCTGCAGGCAGCAGCTCGCCGCCTGTGCCAGGTCCCTGACCATACCACCCCAAAGAGCCGAATTGGGATTCTGACTCAATGATTTTGGCCCCGTATTCGGATTTCATAGGCTTCTCCTCCGCTCTGCTGGTGCTGAGGTTGAACAATTACCTCAGTGATGGAAGAGCTTCCACATCAACCAAAGAAGGGGGAGATGGGATTTTTCTGTAATCACCTCTCCTTAGCTGCAGTCACTTATCTGCAAAGAAGCCTTGGAGGCTTCACCATTAATACACTGCCTTCTGGGGAGGAATGTGCTGGAGGAGTGAAAGCATTAATTCTTCTTTGAATCATTATTAGAGCTTGTCAAACCCCCCTCCCTTCTTTTTTTTTACCAAAAGTCTCTGCAGAGCTCACTGTGTGATGGTCCTTTTCTTCCCAATGCCTTCACAATCTGCAGCTTGTGCTATGCCTGTCCCTCGTGGGATCCCTTTTTGATATTTCTGGATGGTCTCTAAACAGACTGTTTTTCAGAGATCTCTATGAGGCATTACTGAGCTCTTAATAATCGTGGATATTTGCAATTCATTTTATTCTTTCTATCACACACCTTATTTTTCTCATGTGCTCCTTAGGGATTTTTCATCAAACGTAATGAACGAGACCTGCATTAACCTCAGACCTGCACAGCAAACGTTGTAAAATTTGAATGTAATATACATTTTGCATGAGCCGAGGCAAAGGACAGATGAATTCTTATTTGCCTTTATAAAGGACTCTGGTGTATCTGAGCAGGACAAAAAAGACAAGTGTTTTTCTTGGTGGATTTCTATAGTTTTCTGTGTATTTTTGTGTAGTAGGACAAAGAAGATGTAAGGCCAAGATCTTTAAATATCATCCAACTTTTATCATTTGGTTCAGGATCAAATATTTGCTTTCATGAAGTTCAGAAACTTTCTTCTGCTGAAATGAAGCTTAAAAAGAGTAAAGTTTTTTCCTCCAGGCTGCCTGGTGGCTTAGCAGTCAAATCTTATTAAACTGAACTAATTTTTTTTCTTTCTAAAATCTCAGCTATCTTGCGAGAATGATAGGATTTCTCTTCCATCTCTCCTCCTGCCTCCCTCCTTCTCTTCATCGTAATACCATAGGACAGTTGGACTGGATGATCTTGTAGGTCTCTTCCAACCTTGGTGATTCCATGATTGCAGTACCCAGGAACACTGTGCTGTGGACCCACAGTTTAATTTCTAAACCATACACATAAGGTGGGTTCGGTGTGGGATGTTCTGCTAGCACCAGCACTGCTGCACTGCCGGAACCGTGGCTGAGGCAGAGGAAGGCTTGTTCATGTCTTCCCCTCAGCTCTTCCTGTTGAACTTGGGCAAAATTGAGTCTGTAAAGGGAAGAAACACAGTAGGTGCTCCTATGCCACTGAGGGTTTCGTGCCATTTGAAGTAATTATTTAAATTAACCTGTATTGCAACTACTGGAAGTCAAAGCAGAGATGTTCTTTGTACCTTTTTGCTCAGCAGCCTTTTAGAATGGGCTGTGCAAAACAGGACTGCAGCGCACACATGGATATGTGAGTTTGTCGTCATAATGCTGATTTCTTTCAGCGTATAATAATAAAAACATAAGGAAGTCAGCAAGATGCCCGAATTAATCCCAGGAAGAGATGAGAGGTGACAGGATAAGGGTGGTTCAGAACTAAACAAAAAGTGGGAGAAGTCTGAAAGGAATCAACATGTTAAAACAGCCTCTTGCTGGAGTCCATTCTGCAGCACGCTGCCCTCACACAGCTCCTCACACTCCTCACTGTCATGGACACTTCAGAGGATTAGGCCCAAAGATGGGAAGCAAATCCCTCACAGTTCTGACTTCTCGCTCAGCAGCAGAGAATATTGATCGTCTTTTCTAAGTGTTTTTAAGAGCATCGAGTTTGCTCCTGGAAGCTCTAGGAGGAGCTCAGCACCTTGGGAGTACTTGGAAGATTTTGGACTGGAGGAGTCCTGGCTTTATGTGATAATGAATGGTGATGCCCAAAATCGTTTTCTAAAGCGACTTGACTGTGACTAGAATTGATAGTATAGTTTATCACTGAAAGAAAATAGCTGCTGCAGATGTGGAAACCCACATTATAAATGAAGCTACTTTGTTAAAGTAGCTGGGCTGACTTTAGTCAGTTCAGTTCAAGCCTTAATACTACCCAGCCAAACTAAAAGTAATAATGAAATGAGAACTACTTCCACTCTCTGTGACGACTTGATTCAGTCAGTGGTATGTCTGTAACGTGATTCATCTAGAGAGAGCATCAGTGAAACCATAACGCTGCTCTTGGCAACTCCTGAGCTCCTGTAAACCAGTGATGGTGTTGGTCCACCTGAGCACTCACTGTGGTTTCTCCATGTTGGGCACCTGCTCTCGTGCTGAGCTGTTTCCAGCAAGTAGCTTGGAGGAAAGCGTGCAAAGGTATTTACAGAATATGCTGAGTTGGAAGGGACGCACATTGCCCGTGGAGTGCAGCCGCTGCCTCCACACAGGACAGCCCAAACCCAACATCTGCTCCTGAGCTGCAGCAGCTCGGGGCTGTGCCCACTGCCTTGGGAGCTGTGCTGTGCCCACCGCCCTCTGGGGCAGAGCCTTTCCCTCCCCTGACAGCCCCATGCCGTTCCCTGGGCCCCGTTGCTGTCACACAGAGCAGAGCTCAGCACTGCCTTTTGCTCCCTGACCCTTCCACATCTTCACAGCCCCCCTTGGGCTGCTCTCTAGTAGCTGTATGTCCTTGTGTCGTGGCACTCAGACTGCACACAGTGCTCCAGGTGAGGACGCTCCAGCACAGAGCAGAGCAGGAAGGTATTTTCTTACTGTCCCACAGGCCGTCAGTCCGGTGTGTGTTGCCAGCATTGATTAATACTGATCACTTCAGAGGAAAGTTGAAGTATCCTCATAACAGATGGTGCTGGAACAAACCTGGTCGTAGTCAAAGTAACTTCAGAAACTTCCTATCCACTAGTGGCTGCCTCCTGTCTTGAATTGTGAGGGTTTTGCCTTGCAACAAAAAATGTAGCAAGCTAATATAACGTTTATTTCGTTCTGCCTATAAATTTCTTGTAAACATGACGAGTAAAATGAAATGTATGTGTGCACCATGTGTGATAGCTGTGTATGCTGCTGATTCCAAGCACCAGGCTCTGGATTCAATACACAGTCTCTGCTGGAAGACGTGCATGCAGAACTGGCACTGAGGATGGTCACGGAGGTGCAGCACAGTTCTGTGCACAATTATTTCACTGCTTCTTCCCAGTATAGAAATGTGTCCTCCAGCTTTGCCAGCATGCCCCAGTGCTGCTAGAAAAGGAAAGCAAAGCAACTGCCATTCTCGGTGTCAGATAGCAATGGATTTTGTTTACTGTAGTGGAAGATGTGTACAGCTGTAGGTATGATGCCATAGATGGCATGGAAACAATTTCATTTCCTGACTGTTGTCAGGTTTCTGAATAGACAGTTTTTTTCTTCGGGCTTAGCCTTGGAGTTCAGATTAAAAAACTGGTTCTCAGTCATTCAAATTGGAAACACTTTTACTTGTATTCTGTAGTGTCCCTGGACTTTGATGCTAAATGGCAGATACTTCGATATTTTCCAGAGCTGAAAAGAGGATAGATGGTGTAAAGCGTCCTGTCAGACAAAATGACTTTGTGAAGACTCTTGATGGGTTTCCTCATCAGAAACAGAGCCGTGATAACCAGCAGAATGTCAGAGCTGCTGCCAGCAGCACATGGCCCTGGCGCTCCGGAGAAGCTCCAGCACCTGTTTGGTGCCAGGTCCTGGCAGCGGGCAGGGCTGCCACAGCCACATGTGTGAGATGCCTCTTGCCAAGGGAGATGGTGCTGGGTGCTGGGACTGGCCCTGCTGCTCTTTTTTAAGGGTAAATGATTTAATGAGTCCCACTGGCATTGCAAAATCTATATGTGACCATTTTTACACTCTGTGCTTACTGGGCTTGTTGTTTTACATGAGGCATGTTACAGCACAGATACCGAGAAGCAGCAGCTTGTTGCACTGCAGTGCACCGTGTGCCATGATGCAGAAACTGTTGTGGCAGAGCCGGATGGGAAGGCATTAGCACTGCAACCCCAACCAGGGGGGCCTCAGACTTGCAGGGTTCACTCGAGCTATTTCTATTGCTCTTGCGTTTGCGTTTACCAAATTCTCAGCTGGCAGAATGAAGCATTCAGCTCTGCAGCAACAATGTGATCCTGCAGGAGACTGGTGCAGGCTTCAGCTCTGCAACAGAAGAGTTGGAGGGATGTGTCGGCCCCTCTGCCCACAACAGGGACACGGTGAGAATTTACTGCAAACAGGGAGTGCTTACATTGGCCATGAATATGCCCCTTTAATGAATAATCTACGGAAAGGGGTCAGGATTGTGTTAACTGCGTGTTGCAGGAGTATAAAAAGGGTCCTTGCCTTTCCCTTAGAAGGTCTGCAATACAGTAACTTTCACTGCTGGCAGGGGTGCTGCAGGAGTGGAATTATGACTGGAAATTAGATATGCATAGCCTGGCCAAATGATCATTAAGGGAGATACGGTAATCAGCTGCCAGTGTTTAAGGGCTGTAAACACCAGGAGGAGAAAGATGGCTTATTTGGGTGGTCTGCAGAGTTATAAGTGAGAGAAAAGGTATAAAGCCAAGCACATGAGCATGGAGGTAGCAAGGCAAAATCTTAACCATTGAGTGCTCTCAGTTTAGGAGACCTAACACCCGAGTCATGTAGGTTGAACATAACAAAAGGGAGTATGTTTTAAGCTGGAAGTGGACTCGAGTGCTTTAATACATGCCTTTCACCTCTTATTTCCCCGGACTTGTGTTTCATTAGCATTTTTCGTGCTTTCTTCTCAACATGTGGTTTTTATTTGGCTTCCAGAGGTGATAGTGCTTGAAGGGATGTGTTATTGTAAAAGTAGCACAAGCACTACTCAATTATGGTTTTGCCATTGTTGCCATGGAGTTTAAATCTGTTCTAAGCTGGGGACCGATTACAACAGGAACCAAGGGCAGGAGGTAGCTGTAGCTTGGAAAGGTGAAAGCCTATCACCACTGGCATGTGAAGTCATCCCAGCGCAGGAGCATCGCAGCTCCCGTATCATTAGTGTCCCCATGTATTCCCCTGCAGCTCTACCAGCTGTTGCATGATTTTAGTGCCTGTTCTTCCCACGTGCTGAGTGCTCGTTGAGCTCCCCTGGACAGATCTTTCTGGTTATTCCCTTCTGCTTGGGATGTTTTCAAGGACTGCCCAAGTTCAGTGTTCCCCGTGGCCGTCACTCCCCAGTCACCATCTTCTTGTTTGCTTTGTTCTGTGCTTCAGATGAGGCGTGTCCCCATTAAGACTGAGGTCAGGAAAATCTGGAGACTGTAGCTAATGAATTGATGTTCTCATTTGCATAATTGATGGTTACGCATTTCCTTGGTGACATGGTTTGCTGTGATACTTGGAGCTATTTTTGTTTTGACTTCTCTGCCCTGCAGCTTCTGCTGCCTGCACTGAAGGTGCATTACATGTCAGGAAAGAAGGAACCCCAAAGCCCAAACTTCACAAGCTGAACACTTCAGTCCTTTAATGCATTTCTGCTCACTGGCATATTTACAGTGGCTCAGCTGTAAACCTCTTGTGTGTTAGAGCAGGGGGAGTCGTGTTGGTAACATCTGTGCGTGCTTGGGTGCTGGAGGAGAGGAGAAAGAAAACGGGGGAGAAAGAAGAGAAATATATGAAAGATGAGTGAGAATCAGGTCTTACATGAACTCCCTGAGGATTTCTATTTAATACGCCTTTTCCCCTTCGCTTCCTCACGTTCTGAAGTCCGAGCCCTGGTGGAGGCCGTGTCCCTGTCTGTGTGTGCCGTGCCGTACAGTGCACGCAGCCCATCTTGCTGCAGTCACTGCGCTATGAAATGCTGATGGCCCTCACAGAGCCCTCTCCGGTGCTCCCTTCCCCAGGGCTGCAGCCCTGAGCTCCCACCTGGGCACAGCTACACAGGCAGCGGAAACTGAAAGCCACGGCCGGGGGCTGAAATTGCAGATCTGATTTCCTCCTGCGGGCCCTTCCTCACTGTCTCGTACCAGCACCGGCCTCAGGCCGTCTCACTCCCCCGTCAGACGCCTCGAGGAGCGCTCGCCTGTCTCCAGCGGCCGGGCGCAGCACCGCGCGGTGCTCAGCCCGAGTGCTGCCGGACCGCAGCTCCCAGCGCGGGTCTCTCAGGGCTGTGCCTAGCGATTTGTTACGCGTGGGGAAAAGAGCAAAGTGCGGACTCCTAGAGAAAGTAGCAGCGCGGTTCTGAGAGGCGGACAAACAGCGACAAACGCCCCGAGCAGCGCCGCGAGGCCGCCCGGCCCGAGCCGTCACGGAGCAGCGCGAGGCCGAGCGCGTTCCGCGGGGCTGCGGCGCCCCCTCGTGGCGCCCTCACGAGGCCGCGTTGGCGGCGATCCCCGCGGGCCGCCGCTGAAGGAGGAGCGCTGTGCGCCCACCCGACCCCCGACGAGAATTCGGTTAAGATTGAAAGGGAAGCCTTAAGATTGAAAGGGAAGCCTTGCGGAGAGCTGGGTCGGGCAGAAGCCTCCGGTAAAAGATCCGAGCGCTGCGAGTTTGCGCTGCGAGCAGCGTGTGGGGCTCTGCTCTGCGCCTGTGGCTTTCTGCCCTTCATCTGCGGCCAAGCCACTGTCTCCGGCGGTCCCAGACGGCTAAGCGGGGCTCTGAGCTGAAGTCAGAACGGAGCAGCACTCACCCACGTGTGCCCACGCGTACCCAGAGGTGGGGACACGCTCCGTCCCAGCGAGTTTGCTGCCCGCACGTGCTGAGAGGCGCAGCTCCACGCGGGGCGGGCGCTGCCCCCCCAGGACACGCAGCCATCTGTTTGCCTCTTGCCGGGGCCCTCCGCACAGTCTGGGAGAAGCACTCCCTGCGGAGCGGTTGATGAATGCCTGTGAAATCCTGACCCGGGGAGCAGGGAGCGCTGCCAGATGTGATAGCGCTGTCCTCTGACAAATGGCCGCGGCGTGGCCCTGCTCACATAGCGGCACAGCTCTGTGTTGGCCCCGCACACCCATCCTGCAGCCATCCGTCCCGGCCAGGACGCGTCCTGCAGCCGTTCATCCCATCTGGGGCTCAAATGTCATAGCGCAGCTTTGGGCTGTTCTGCCTTTCATTGGCACTGCTGCTTAAAGTAGCAGTTGTCAATGTGTGCTTCCATGTATCCAGCACCTTTCAGCTGCGCTGAAAGTCCCAGCGCTTCGTACACGTGAATTAAGTATTGCAACACAGCAGTGAGGCATGCAGGGAGTGCATGGGATCATCCAGTCAGCGCTGCTATTACACAGCTGTTCCTTGTAACATGGCAGATATTTGCCACATTCTTAGCAGAATTCAGGAATATCTGAATAGCAAGCTCAGGCCAGCTGGTTTCAAACGTACTGGAGCTGTCAGTCCAGTGCCAGAGGGGTGGGCCCCAGCACGCCCAGGTGTGTTCTGCGGGGTATGCAGCCTATGGCAGTGCATCCATGTATGCCCTTGGCTCTTCCCTCTACCCATGCCACTGCCCCCTTTACATGTCAGTATGCAGGACGGGACCCTAAGGATAGACAGCAGCACGTCAGATAGGTTGGGAGGTGGACAGATCTCCAGGGTGATTCCTCTTTAGAGGCAGGTCACTCCTAAGTGTTCTGTTCCTCTTCACTGATGGTAAAGAAGATCTGGCAGAGGAGCTCTGAGACGTGCACATCTGCACTGCAGGTTTGCAGAATACCTGAAAGGAATCTGACCTGTGAACTTATAACACTGTGAGAGGATGCTGAGCACATGGGCCATTGGAATGAGCAAAACCCATTCTTTAAACTTACTGTTTTTATTTTAATACAATACGTACCACTTCTGGAGCAATCTCAAATCCGGATTGTCAGCAAAGCAGTGCCGGATGTCTGAGTCCCACTTAGGAGGCATTCGGGCAAGGGGCTCACAGGCCAGGCTTAGGGAGGGTTGGCACCACAGTGTGTGAGGACAGTTTACTTTAGTTAAAGGATAGTTTGGCTCCATAAGGAAATCATGGTTTCTGAAGCCCCTGCTGTCTCTTGCCTCAAGCTGCGGTCCCTTCCTACCTCTGCAAAGTAATTTGAGTTTAAACTAACCATGGAAGAAGAACTGGGCTTGCAGTGGGGCACCAAGCAGCATGACAGGGGCAGCATGCTATGACTAGAAAGTGGGAACTTTTCATTAGCTTTGCCATCAAAGCCAATATACCATGGGGCTACACTTCTGCTCTTATGCCCTGGGAAATACAGCTGCAGTAGTTACTGTCCTGGCTTTGTGGGACAGTAGTGAGGGTACATTACAAGTGGAACATGTGTAAGCACAAGTTTTTAATCAATTTCATGGGTGGACACAACCCTCAGATGCAGCAAGAAGCATTCCTCTCCAGTGTTACGTAGATATAGATACTCTGCCTTCTCTAATCAGACATCAGCAATGTTTAGAACTTGCACCTCGGTGGCTCATGCTGGAAGAAATGTCGAAGACAATGGCAGTAAAGGTGGTTGGAATGGGGGCTGTGCTTTGGAAGGTGTAACAGAAGCATAGACAGATCATTGTTAACACCATCTAATTCTCTTTTATTTTTAG
Seq C2 exon
TGTGGAAACAGTAAATGATGGGCAATTTCATAGTGTGGAACTTGTGATGCTGAATCAAACTCTGAACCTGGTGGTGGATAAGGGGACTCCCAAGAGTCTGGGAAAACTCCAGAAACAGTCTTCTGTCAGCCTCAACACACCGCTCTACATTGGAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000001916:ENSGALT00000002967:32
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.038
Domain overlap (PFAM):
C1:
PF0221019=Laminin_G_2=PU(33.3=97.7)
A:
NA
C2:
PF0221019=Laminin_G_2=FE(40.3=100)
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]