GgaINT0106611 @ galGal3
Intron Retention
Gene
ENSGALG00000016837 | MYO16
Description
NA
Coordinates
chr1:142631173-142647257:+
Coord C1 exon
chr1:142631173-142631264
Coord A exon
chr1:142631265-142646567
Coord C2 exon
chr1:142646568-142647257
Length
15303 bp
Sequences
Splice sites
5' ss Seq
CAGGTAAGA
5' ss Score
10.77
3' ss Seq
TTATTATTGTTCTCTAACAGGTT
3' ss Score
11.47
Exon sequences
Seq C1 exon
GTGTACCAGAGGAAAATGAATATTCAAGACTGTCAGCCAGCACTACAGCAGGTTCATCGATTCAAAGACACAGGGAGAGCCACACTACTCAG
Seq A exon
GTAAGAATATCACTGATGATCTAAGGAAAGAGAGTAACCTTTACTCCATAAGAGAGTAAAAATTCATAGTACCTGCATGTCAAAAGCTTTCTTGATTCAAATCTGTTTTTTGGATATTGAAAAATGCTTCTCTTACATGTTTGCATTGAGCTAAAGACAAAAATCAAAATCAAAATCCCACCATCAATTAAATTAATCTGCAATATTTAAATGCTTTATATTAGAAGAAAGTTTAAACCACGTTCAAACTTCTGTATTTGATCCTTCCAACACTACTTGCCAAATCAAACTGAACACAATTTCAGTTTAGTACTTAAAAATGTAACTTTTCAGTAAATAGATAGTTGACAAAGTTTCTCACAAATCTTTAAAACATATTCCATGCCACATACTCAGAATTACATGCAGGGACAATCCTTAAATGCAACCTTAATTAGAACTGTGACAAGTTCAGAGAAGGAACAGTGCAGCCCAGTGATTTTTGATGCAACTGCCATAATGAATAAATATCTTCCAAAATGATATTGTGAAAAGAAAATAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGTTTTAAAAACTCTGTGCACACAGGGTTTAAAATTCTTACTGTAAAAAGCATTCCTCACTATTTCGAAAGCCTGCAACGCATTTGAAAATGATTGGTTTTAATTACAGTTGGCATTTCTTAGCATACCACCAGTGACTCTTAACAGCATACAACCCTATTGTAAAACTGTTTGCGAGACTTTAGTGTAGTAACCTTATCACTTTAAAGTAATTCTTGTACAGACATATGAAATAGGACAGATTGTTTCACAGATCTTTAAAAGCACTGATTGACTAATTGCTTTCGAGAGAGAAACATAGACTGAGTCCTCGGGTTCTTGGCTGACTCTGTCATTTCAACTAAAGGAAACTGGTTTGTTAACCTTCAGGGACTTCTAATATTTATGCATTTGTTTAATATCTCTCTGCTCACTCCTTACTGAAATGACAGAAGTTAATTTCATTTTTGTCATAGGATCTCAAGGCTCATAGACATCCAATGGAAGTCTAGTTACTGTGGCTTACAGTACCATCATGTTGTCACTAGTTTCTGTGGCTTACAGTACCATCACGTTGTTACATCAGGTGATAACTACCTGTGTCACTGCTTGAAACTTTCTGCACTATGCAAACCTGCAAAACTACACCCTTTAGAGAACAAGTTCTTCAGCTTAGCATCTATTGACATTCATCATAAGAATCAATCTTAACAAACATTTTGGAAGCTATTGCCAGTATAGAATATTAAGCAGATAAAAACAGCTTAATTGATCATCTCTAAAATAGAGCCTGCTAGAAAAGAAATAAGCTCAATATTGGCCACAAATGGTACTTTTTTAGAGCCATTATTACTTCAGGGTCAGTTTTTATCAGGATGAAAAAGACAATAATTGATATAAGATTTAAAAATATTAACAAAATATTTCTTATTTTAAAATTATGCAATAAAATCCTACTTTCTTCCTCTAGAAAAAAAGGGAAGAAAATTAAAAACAAAGCTTGATTTTTGTCTGATTAGAAAGGAATGATCTTACATTTTACAAGAATAGTGAAGTATGATTTTTTAACTAATAACTTTCCCTTCATATTGTACTGTGGCTGCATGGTTGTGTAGATTGCAAGCAAACAGCACATAGAACGTAAAGAACTTCATATGTGCCATCAAAGCTGAAATATTAAAAATTGAACCTTGTTTCATGTATTTTAGTTTGTTCAGATAATAGGTCCTTAAGAAACTATTTGTTAGCAAAGAAATACATGTATTCTTTCAACAAGACAGGATGCCAGGTTCCATGTGTTTTATGTTTTCTTTGTAAAACAAAATTTTCAAAACACAGACTGGAAATCTACAGCAAAACAATGTTGCAAGAAGCAGTATCCAGATCTGCCCTTATAAAAAAAGTCTACTTTGCTCTTAGTATCTAAGCCTAAATTCATCAGCTGCAAGCATACTCAGCTTCTGCAGAAAACCATCTGGTAGTTCTGCTGCTCCTCTTGCTCCATGAACAGCAGAAAACTAGGAAACTGCCCCATTCAAGCTTGTTTTAAAATTACTAATTTTAAATTACTGAAATGCTGATTCTTTAAAACTTCTTCAGTGATTTGTTTGACATTTTCAAACGTCCCTGGATCTCTACCCTTAAATTCTTCCCCATCATTTTCTTCCAGAGTCAAAGAAACCACCAAAGTGGAAGGTATGCTTTTTTGGTCATTTGTGCCATAATTTTGATAGAATCAAAGAGTTGTTTGAGCTGGAAGGGACCATTAAAGGCCATCTAGTCCAATTCTCCTGCAATGAACAGGGACACCTACAGCTTGATCAGGTTGCTCAGAGCCCCATCCAGCCTGCTCTTGAGTGTCTCCAGACATCCACCAACTCTGGGCAACCCATGTCAGTGCCTTACTGCCCTTACTATAAAAACTCATTCTTATATCTAGTTTAAGCCTCCCCTCTTTAAGTTTGAAACCATTTCTCCTTGTCCTTTCACCACAGAGTCTTCAAAAGAGTTTGTCTCCTTCCTTTGGAAGAAAAACCCCCCTTTAGGTACTGAAAGGCCACTCTCAGGTCTCCCCGGAGCCTTCTCTTCCCCAGTCTGAACAGCCGCAGCTCTCTCAGCCTGTCCTCATAGGAGAAGGGTTCCAACCCTTGGACCATTTTTGTGGCCCTTCTCTGGATGTGCTACAACATATCCACATCTCTCCTGTATGAGGACTCAACATCTGGACGCAGTACTCCTGTTGAGGCCTCAGCAATGCAGAGTAGATCACCTCTCTCACCCTGATGACCACACTTCTTTTGATGTAGCCCAGAATATGGTTGGCTTTCTTGGCTGTTTGGGCACATTGCTGGTTCATGTCCAGCTTCCCATCCATCAGTGCCCCAAAGTCCCTTTCGGCAGGTCTGTGTTCTATCCTTACACCTCCCAGCTTGCATTAATGGAGGAGTGGAGCCACAACCCAGGCTCAAGACCTTGCAAGGTCTTGCCTAAGTAGAAGATTTTGTTATGACTAAGAGTCATTTCTATTTAATCAGGCTCTAGGAAGTGATCCAAAGCATACTGGAGACTTTTTTGGAGTTGAAATCATTTAGCAGGATCTAAAACTTCATCTGAAACAAACAAACAAAAAAGCTTTATAAAATATCTCCTTAGTGCTCTGTATATTTTTCATCAGTAATTTCCCAGTTCCTTAGCCAGTCCAGTGGACTCTCCTCTCTGGATAATGCTTATTGCTTCTTCTCATCAATAGCTCCTATGAGCTATGTTTTAAAGATGTAAGAGCAAAGGCTGTTGAGATATGTAAATTCTTTGGCATGTCAGGAACAGCAACAAGACAAAATAGAGACAACAAAGGCAAGACTTTATCTTTTGGACCTTGCACAAAAGCAAAGCAGCCTTGTCTTTTTTTTTACAGATTCAGAACTGTATTTTTTTATTTTTGATAAAAATATTTTAAAGTTGTTATTAACATTTACTATGAAGTGGGATGTGGTGTGAGAAAGACACAGTGAAATGAAGAAAAGCAGGCCAGCTAAAAGACTCCTTCTTTCTTATGTGGGCAGCAAGAAACATCATGGTCTGTCTGTAAAAGGATAAGATGGACAACATGGAGATAAAGAACAGATGGGAATGAGGTGCACATTAAAGACTGGAGCAATAATAAGTATGTGTGTGGGGTGGGAGTGGGGAGAAAAGCAGACAGCAGATAAGGGATGATTCAGAGAAGGAAGATTGGAGGAAGTATAAAATGACTGAGAATAATAAGTAATATTATGGAACAGGGGATTTAGAATGAGGAAGGAAGGAAGAGACAGGGAGAAGAAAAAAGAAATAAAAGGGAGGTGAAGAAAAAAACTGAGAAATAAATAGGTACACACTACAGGTTGGTGGTGGGAAAACAGAGAGGCACTAAGGCATTAATAAAGTGGAATGTCATATTTGATGTTCCAGATGTGACATTTGCCTTCATACACGTATCAATGTGATATTTATGTTTCTTGAAATAAAAAATAATTGTAATAATCCAACTACATTTATAGGGTGGCTTACTATGTAAGTTAGTTCACGGCCATAGTGTCCCAAAGAAGGGATAGAAAAATTCTTATTAACAGATGCAAAGTCTCTTTATGCAGCTTAGTTTTCTCATTATGGAAAGTTGACTTACTTGAAATCAGGTGGCACATGCATTCAAGCATCCTATGGAAGTACTTCCAGAACAAGATATAAGTAAGCAAGCAGCTGCCATTCTAGTAGTGGTTGTCCCCTTCTGAAACATGTTTTCTCTGTCACATACTCAAAAGTTAGGAGGTAAGATAAAAAATGATGATTTTTTTCACTTACTGTTATATTAAAAAATCTGCAGTCTTATCTCTTCTATTTTGTTTAAACCCCATAGCACTGGTTGGCAGATTGCAGTATTATAAGAGCCAACACCTGACAATGAAAAATTGGAAATATCTTTTCATATTCATGAAGAATATATTTATTGTTTCATTACAGCTTAAGCCATAGCTCTTTTTTCATGAAATCTCATTGCTTTCAGCACTCTCTTCCCTCAGAAAGAGCTGCACATTCATTATAGTTTCAAGGGCTGCCTTTGTTCCTATTTGATTTAATATTTGTTGCCAATCACTTCTTTTGTTGACTGTTCAAAAGTTGAAAAAAAATGAATACCCAAGAATGTGATGCGTTGCTACCCCCAGCCTATTGTCACACTTCTTTCTACACACTGGGCTCTAGCATTCGTTATTAATATCTATTGGGTTTGACTATTAGCTGGAAGTAATCTTTGATCATCTTTCAAGAAAAATGTCACAATCAACCAAGTGTAGTGTAATAACAAAATCACCAATGCCTTTGTAAACACATAACATCCAAGAGAGGACACAGAATGTTTCATATTTATCATCAGTCTGTATCAGTGTAAGTCTGTAAATTGTGTTTTGCTTCATTTGTTTTGACAGCAGTACCAAAGAATTCTCTTTGTAATGTCAAATCCAGACAAAAATTGGGACTTACAATACAGTGCGGCTTTATTTTTAGAAGCAAAAAATATGTACCTTATATATTAAATAGTATGAGGTGATACATATTTTAAATTCATTGGTCGGTACACATATTGCTGTTAATGGCGTTAATAGTGGCAGACACTCCCCTCCTCTGCAAGCATGTCCTAGTTCTGACTACTGGGACCTCCAAAAAGGAGGAAGACTGTGACTGTTGAGGAGAAGGGAACATCCTCCTAAACATCCCTGGACCCTCCTTAAGCTCTGGGGCTTGGCCAGAGTATGTCTTGATTCTGCCTAGGCTTCCACAGTGGCCAATGGGTCATCATAAGAAGCTGCTTCTTTCAGTTATGAGTTCAATGGGAGGGTGTTCCCCTACCCCATGGTCAGTACCTGTGAGTTCACAGTTCTAAGTGCCTGGTCGAAGAGTTGATTCCTGTGCCCTTCATTCTCTTTCATTCACACAGTGCCATATGCATGTAGAACAGATGGGATTTGCACAGCTAAGAGCCTGTAAATTAAGTGATGTTTGCCTTTAATGTTATTTGACTATAAGAGGAGCCTTTTTTTGAAAGATAGGGTGATAGACAACATTAGGAAATAGAGCTTAATTATGGTTTTTGTAATTGCTTCAAAAGCATAGTGAGAAACATGGTTTCTAACTGTCTGTGGAGATTTTTGAGAGCTGCAGGAAGTTATATCAGTGTTGTTGGGTCAGCTGTTCTGAAGATGTCTGCAATAGGTGATCTGTTTTCAGAGCTCATCTTCAGAAAGACACAGTTGCTATCCAGATCATAATCATTTTTTCTGAAGCGTCAGTGTTGAATTATGAAGATGTTCCTGAAATCTTTAAAGAGCAGTTTATAGTCAGTCTGTCTGGAGAAAAAAATATTGCTTCAGAAAAAAAAAAAAACAATATATTTCAGTATTAAGTTGAAATTTCAGTCAGTCTAGGAAGGTGTCATTTTGTAGCTGATAACAGAAATCTAGTGTAGAGATAAACTCAGCCAAACCAAATAATAATAAATAAATAATAAAAGCCCACAAGATCCAAATAAATAAGTAAAATCCACCTGTTTTGAACATGTCCCACTGTATTCCCAGCTCAAGTAATCAGAGAGCCTGGAATGTGTGCCGTCATATATTATTGAACATTCCCCACCTTCTTCCAATGTTTTTTTTGCCAAATTATGCTACTGCTCTACTCAGGATTTGTATACCAACTTTATTTTGCAAAGGCGTAATGTCACTGATTGTGGAATGACCTCCAAGCTTTATGAAAGATGATTAGGCTAATTAATCTAGAATGTGGTTCCAGGCATGTTATCTCTTCATTGAGGGAAAGGTACAAAACTGAGCTGAAAATCAACACTTGCTTTTGCAACTAAAATGTGTTCCTGGGGAAAAATAATAATAAAGAGAAAGAAAAACAGCAAGAACAAAAAGAAAAACCCAGGAGTACCCAAGATCATGAGAGAAAATGAGACAATTTGTAACAGCAATAGAATCGTGATCAGATTATGAAATCTAAGTCACCCTTGTATGTAGTCCAGGGTTCTTCTCCTGACCAAAACTCCCTTTTCCTAGTCAAAGCAAAAGGGTTCAGTGTGTCTGAGAGTTTCAAGGTACATCCTCCCAGTTTCCATCAGTCTGTGAGGAAGAGTGTTCAGGAGGGAGTTACAGTAATCTGATGAACTTTTGAGGAAAATCCTTTCAAAAAGCCAAGCCAAGGCAAACAGTGGAATTTTTTTTTTTTTTTTTTTTAACAAAGCTTGATACTTTTTAGAATGCTTTGTGATAGCAGAGGGCTGGAATCAAAGGTGTCTATGCCCAAGTGTTCTCTAACCTCAGAATATCGCACTTCAAGCATTGCTTGGAAGAAAATAAAATCCGTCTCTTCAAAAATCAAGATTACTGGAAAGTGTTTACCAGGAGGGAAAACATTTCTTCCTGACTTCTGTGGTGATCCACTGTATTTTAAATATGTCCGTTACTTTTAAGATTATCTGCAGTTTTTAAGTACCAATGAAGTTCTGGCTTCCTTCGGTATGTCATTTGTATATCACCTGATCTAAAACTAGTTTTTTCTTTTGGTATAATAAGAAACTTTAATGAGACATTTTCTTGTAACAAAGCAAATACACGTGAATGATAGATCTCATGTTTAACTCCATTTTAGCTGGGCATCAATTCTCCAAACCAATTCAAAATTTACTGGAAAGGAGAACCATTTTCTCCTTTCCAGTAAATCCATTTGCCATCCATTTGGAGAGTTTTATTTTTGGAGATAGTAATGCTGCTCCAACACAAAGGAAATTCATCAGCAGTTTAAGAGAATGGTTAACTAACCATCATTTTACCTTTGCATATCATATATCAAATTATTAGGTCCCAGGGGTCTGCATTTCAAAAGAAAAAAAAAAAAAAAGCATGTCCCAGCCCAGCATCTGCAATTGGATGAATCCGCCTCGATCCCAGTGGAACATTAGTATTTGGAGATTTTTAATTGGAATTTAGAGGCATGTAAACTCATTAATCATAGCTGCTCTCTAATTCCTGCTGGGGTCTTACATGACAAATGCAGGATTCCCAATCAAACACAAATTTACATATTGATTTGATTTATGTTGTATGCTTGCCTGGGTTTTTTAACATGCCCTTATTTATCTGCATGCTTTGTCCTTGTATCTTCAAATTAATATTTTATTGTTTAATAATACGTAGAGTGACAGATGTTTTTTCTTGATTCAAGAGTTGGTGGAAGAGAAACCTCTTCCTAATCCATTTTTTTTTGTAATGTTTTTTGTAAAAACAAAACATGTCTGTTTTGGTACCTGAAGGTTTAGGAATTTGAGAGGTTGTAGCATTTCTTCTATTGTTAAGAAAAATATGTTACTTGCATATTTGGAAAAAGTTGGCGTAGGGGCTTATCAAATGCAAAAGAAAAGTAGAGAAAGTTGAAACCATTTAAACGAGCTACGAACACCTCATGAAAGAGATGCATGCCTATCACATGTTGAATCAAAATGTGCTGCCCTCACTAATAACTGCATACGGCAATAATTCTTTCTAGAACTGCTGAATGAAATTGTGTCTTTAATTGTGTAATGAATGGTGAGAGCATCCTGATCACTTCAGTCTTTAAAACTGATGATCCACAGGAAACCCACTGGGATTTGTGAACTACTTTTAAGGGCTCGGATAAGCATAACTGTCAGTCAGCGATTGGTAGCAGGCTGGAATTTGTTCTGATTACATTTTTAGACAGCCTGCAAACTGGAAAAGATTGAAAATATGGCATTTTTAAGATAGTTCAATTTCTAAGATGTAGATATTTATAATAATTTATTATTATATTACATTTATTGCATAATTTACTGTAGATCCTGAATAAATTTGTGGAAGGGAAAATCACTATCCACATAGACTAATCCTTATGGATTCCATGATGGGACCTCAATTTTGCTAACAGCCTAAAATACTAATGGAAGAGAAACATACAAAAGCTGCAGTAATTAATTGTGAGAATCTATTGACAGTTACTGTGAAGCACAAGCATTGAAAAATCTATTAAAGAACATCATTAGCAATATTTCTCTGAAGGGAAAATAGAGACTAGTGACCTCCTGCAAATGTCTTGGGTCCTAAAACTATGTGACGAGTAAAAATCTGTTTTCTGTTGTATTTCTCTGTCTATATTCAGATATGTTGCTAAAACTTACAGAAGCAACTGAAAACAAAAGGACAGTAGAACTCATAGAGCTATGTTTTGTGCAGAGAAAACTATTGGTATGTTTCAGCACCAGAGAATGTAATTAAATGCTTCTTTGCATTATCTGGTTGATCTCTGGTAGATTAATCACTGCAATGGCAAATGACAAAGAAAAAAACCTGATTAGACTATGATACACATATTTATGAAAAAATAAAGCCTACATTTGGTTAGGAAAAGAGCGAAATGAAATAAAATATTATTTTGTAAATCGAATAACATACTAGTGCAAATTAATAAATCTGTTAGACTCTTTGAGACCTTTTACCCTAGCTTGATGAGTAAGTTGGTGTTGCATCTGATACACAAGTAGAGAATATAAGCTCTGTGTTACATCTCACTCTTACAAAATATCCTCTGTAAAGTTGTAGCATTTAATCTTTTAATGCAAAATGAATTTCCTGAGATTCTACAGCCAAATCTGTAAATAACTCTGAAATTAAGTTTAAATGGGCCTGTTAATCTTTTTGTCTGGTGTACCTTTGTGTCACAAATGATTTAAAAATGTGAAACTTTGAACTTTCCTTAATTAAAATGCTCTGTATTTTTTAACCAGCTTAAGAACTAAAGCTACAATTAAAGTAATTTATGGATTTATAGCTACTCATCTTGATTCTAAGACAAAGTTGAAATCCACTGCCCACTTTAATTCTTTATAGAGGAACTCTAGGCAGAATTTATAAGCCTGCATCCAAGAAGGCAATTCAGGAACTCATTTTGCTGTGACTGGGCACCACTGAAATTACTGCACCACTGAGTAGCTTTGGCAGCATGAGTACTCTTGTTTGTCACTATCTTTGACACTTTTGCTTTCTTGGTTTGCTTAGTAAGGATTCTGCATACCAAACAAAGGGTAGGTGTTTGGTTATCCAAATGATATGGCTGTTAAATGCTAAGTATCCTGTATGTTTTTGTGGATCTAACCCAAATGCTGTGTTGCCCATATCTGTTTGACCATTGATTTTGAGTAGGAAAATATTTGTCTACAGTTGGTACTCTCTCTTTCCTTTAATGGTTGAAATTATTTGTTCAGTGTTCATTGAAAAGATTAGCACTCTTAAATTACAGACTTCCTACACACTTCATTCAACCTTCGCAATTTACCTGCTCAGGATACAGGGTAATAATGAAGGAATAGTGCTTGCTGTTTTACATTGTACTTCATGTAAAATAATTCAGCAAATATCTTCTATAATGAATATGTATAATCTTTCTATTCATGAATGGAAAATCTTTTCCAACCTGAATGATTCTATGTTTCTATGATTCAGTAGATGTAATTAAATTAATCGATACATTCAGCCCTACAAGCCACCTAACCAGGAAGACTGAGTGGATGAAACCATCTATAAACAGATAGGAGAGTCTTCGTGTTCACAAAATATGGTCCTCATGAGGGACTTCAGCCACCCTGATATCTGTTGAAAGGACAACACAGCAGGGCACCAGCAATCAAAGGTTCCTGGAATGTGTTGGTGATAACTTCCAAGTAGTACAGGAACCCACGAGGAAAGGTGCTATGTTGAACTTTGGCCTCACCAATGATGAGGGGCTGGTGAGTAACATGAAACTCACAGATAGTTTTTGCTGCACTAACCACAGAATGGTAGAGTTCAAGATCCTCAGGGCATCAAAGAGAGTGCACAGCAAGCTTGCTGCTCTGGACTTTAGGAGAGCAGACTTTGACCTCTTCAGGAAAGCTGCTTGGCAGGGTGACATAGGATAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAACAAGGAGATCCTGGACTTTATGTGGTGCAAAAACAAAGTCTATGGGGAGTGAAAGCAGGAATGGGTTACCTGAAAGGACTACAAAGAAATTGTCTGAAGAGCCAGTGATCAGGTTAGGAAAGCTGAAACTCAGAATTAAATGTAGCCAGATATGTAAAGAGGAACATAAAGACTTCTTTACCTCAGTCTTCACCAACAAGGGCTCTAGCCACACTGCCCAAGTTGCAGAAAGCAAAGGTAAGAACCGGGAGAAGGAAGACCTGCTCACTGTAAATGAAGATGAGGTTCAAGGCCATCTAAAGAACCTGAAGGTGCACAAGTCTATGGGACTCATGGAGATCCATCCAGAGGTTTTGAGGAAACTGGCAGATAAGGGTCATAGTAGTCTGGTGAAGCTCCCACTGATTGGAGAAGGGGAAACATACATAACCCCCATTTTCAGGAAAGGATAAAAAGAAGATCCAGGGAACTACAGGGCAGTTAGTCTCACCTCTGTGCCTGGCAAGATCATGAAGCAGATCCTCCTGACAGCCCAACTAAGGCACATGGAAAATAAAGATAAGGCGACTGATGGTAACCAACATGGCTTCACCAAGGGCAAATTGTGTCTGTCAAACTTGATGGCCTTTTATGATAGAGTTACAGTGTCACTGGATAAAGGAAGAGCAACTGATATCATCTACCTGGACTTGTGCAAAGTGTTTGACGTAGTCCCGCACAACACCCTGGTTGCCAAATTGGAGAAAAATTGATGTACTGGATGGAGCACTCGCGGGATAAGGAATTGGCTGGATGGTCACGCTCAGAGAGTTGTGGACAGTGGTTCAGTGTCCAAGTGGAGACTGGTGATGAGTGGTGTTCGTCAGGGATCGGTGCTGGGACTGGTGCTATTTAATATCTTTGTAAGTGACTTGGACAGTAGGATTGAGTGCACCCTCAGCAAGTTTGTAGATGACACCAAAGTGAGTGGTTCAGTTGACATTCTAGAGGAAGAGGATGCTATCCAGAGGGACCTGGACAGTCTTGACAGGTGGGATCTTGCCAACCTCATGAAGCTCAGCAAGGCCAAGTGCAAGGTCCTGCACCTGGGTTGGGGCAATCGCAAGCACAAATACAGGCTGGGCAGACAATGGCTTGAGAGCAGCCCTGAGGAGAAGAATTTAGGAGTGTCAGTTGATGAGAGATGCAATATGAGCCAACAGTATGCACTTGCAGCCCAGAAGAACAACCATATCCTGGTCTGCATCAAGAGAAGCATGACCAGCAGGTCGAGAAAAGTGATTCTGCCCCTCTCTCTGCTCTCATGAGACCCCACCTGGAGAACTGTGTCCAGTTCTGGGGCCCCCAGTACAAGAAGGACATCAGGTTTTTGCAGTGGGTCCAGAGGAGGGACGCAAAGATGATCAGAGGGCTGGAGCACTTCCCCTACAGGGACAGGCTGAGAGAGCTGGGGCTCTTCAACCTAGAGAAGGCTCTGAGGGGACCTTGTAGTGACCTTCTATTACCTGAAAAAGTCCTACAGGAAAGCTAGGGAGGGACTTTTTATAAGGGCATGTAACAACAGGATGATGGGAAATTGCTTTAAACTGGAAGAGGGTAGATTTAGACTAGATATTAGGAAGACATTCTTCTGTGAGTGTGGTGAGACACTGGAACAGGTTGCCCAGTGTGAGGCTGTGAATGCCCCCTTCCTGGAAACATTCAAGGCCAGGCTGGATGGGGCTTTGAGCAACCTGGTCTAGTGGGAGGTGTCCCTGCCTGTAGCAGGGGGGTTGGAACTAAATGACCTTAAAGGTCCCTTCCAACTCAAACTATTCTGTGATTTCATTACCACTACATTTCCATTGCATACCCTTTATCCACATTGAAATATCAGCTTTTTCCAGCATATTTACCAGACCAAAGTCATAATGAATTAAGACTTGAGATACTTTTCCATCCTCATTTGAAAAATACAGTGAAAGATGTAGACTTATTTGAGGACTGGACTGAGATTTGTCCACTATATATTGGAAAATGACCTATATAGTGAAACTGCCGACACAGCATTAATTTACAGCTTGCATAAGGTGGGTCAGGAAAGTAAAGTGCCTATAAGCTATAAATAGGATGCATTTGTCAATTGCCTTGCCCAGGCAAATTGTACTCACTTTTCACCCTGCACCTGTGTGCTTTATGGTTCTTGGAAAAGTGATGGAACTCTCTATTCAAGTGCTTAATTTATGTACATCTTTTAAAACCAAAAATTTCTCAGTAATTTATTAGAGTGGTGCTATCCAAATCTCTCACCAGTAATGTAACGACTAACCCCTACAGAGCCTATTTTCTTATAAGTTTATGTATCTACTTGTGTTTAGGCACAACTTTATTTATCTCTGAAACTTTTATATGAAACTCTTGTGATGACAGTCTAACATACACTTTTTATGTCCCAGCGTCTCTCTGAGAATCACGCTTAATACAGGCTCATGAAATGCCTAATATTTTATGCCCATAATCTCAACCCACAGAAATCTATACAAATCAGCCACAATGCCTCTCAAACTGTATACCTACTCTATAGAGTAAAACTACCTGGCTTCACTTTCTTGATAAATTGTTTCAATTTGAAAAGTTTGGTTTGTCTTCCAGTCTTCCTATTCACACTGGAAAAAAAAATGCTAGGATGCATTGATACAGTTTGTGTTAACATAAAAAACGTTCTTGATTTCATAGAGGTATGTAGTTGTCTGGGATGACACCTAAATATACTTGAATGATATCTATTAAACCCTTTCCAATCTTTTTCTTAAAAACACGGGATTTTCAACTGTGCTTGAAATTATTGTGTCTTCCATTAATACATTTAATACATTTCTCTTTTAAGTAATAGCCAGCCAACAAGTAAGGAAGTTCCTAATAGATCTTCAGGCATCTCCATGTAAGGGCTCCTTCCTTCTCCAACGGCATTTGTGAAAGGTCTGACCTTCACAGGATGCATTTGGAGCAGTGTTAAGAAATCTTTGTAAGCCTCTGTGTAAGCCTCTGAACCCCGGTGCTGATGTGAGGCCTTCAAACTGACTTGTACAAAATAAATAATCACTGCAAGAGTGGAAGAGAATAGCTTCTCCTAGGTGGATTATAAATCTAGTTCAGAACTGTTTGGCTGCTTCAGTATTAGTTTATAAATAGATTCAAGCTGATTGAAACTACATTTTAAGTCATATAGTCTGGAGGAAGACAAATGCTTGTCCCCAATTCTAAGGATAATTCATCTCTGTAATGGTAGCTTTATTAATTTCAAGCAGCAAAACACGTATCTTGGTTATGGTTACTTGGGTATTTACTACAGCAGCTGTCTGCTCTCTGTAAAAGAGTGTCTTCTGAATATAATGGTATTATATGACAACAGTTTTAAGACCACGTTGTTAGAAATATGGACTACTCATCACAGTCTATGATCTGTTTTGTGTATTTCAAAGGAGTGTGTTCATGTAGCCTTTGCTGATGCAAGGATGATTCTGCCATTCATTCTGACATTTTTGGTAGCTGCTTCATACAGTTTCATTTCTATGGCTTTCAGACATGAGACTGAAGGAAGGCAATTCTAATTCATCCATCTTCTTTATTTTTAGGGTAAATAATGATAACTGGGGGGTGGGAGAAGCAAGTTAAGCACAGCTTTAAACCCTTCTGAAGGAGAAGATTGCTTCAAATTTTTAACGGTTTTGCTTGATCTCTTTTCTTTCAGCTGTAGTATAATCTTTCCCTCAGCACAAATGTAGAACTTGAGTTCTTACCTGCATGTGTCTGTTTATTTCTTTAACTGTACATACCCAAATGGGAGCACTCACCAACCATTCACCATCTTACAAGACTAAGCCAGGGCACACTATGGTAGCCACAGTATTTCAGTTCATAGTCCTACTAGAATGCGTGGATAAGTTGCTCCATAGGGTTGTGATCTGCAGGCTGGAAGGTGGTTCACACTTCATGCCAAGAAAGTTAACCTTTTTTATTATTGTTCTCTAACAG
Seq C2 exon
GTTATTCATCAGCTTAGACTTTCTGAGAATGAGAGTGTGGCTCTGCAAGAGCTTCTAGATTGGAGGAGAAAGCTGTGTGAGGAGAGAGAAGACTGGCAACAAATCTTGCACAACACTGAGCAAAGAATCACAGCCCCTCCTCCACCCCCTTGTAAAAAACCAACACTGCTGAAGAAGGTGGAAGATGCCTCCTGCAACAGACTGTCTTCAGGCATCTGGGATACCACCATGTGATCGGAATGTGTGTGTTTGCAGACAGTTAGGAGTGATACCATCTCATGCCTTCAGTCTGCACAATCAGCAAGTTTCCTTCCCTCCACAGAATGTGCAGGGTTTTTTTTTACAAGCAATCCTTCAAGAGCACAGGATGGACAAGCTATTTAGATATGTCATGTGTGCGTGTATTTGTATGTTTGTCCTTTTCATACATATATATACACATATGCATATATCTGTGCATCTATATGTACGTGTGTGTGTATATATATATAAGGTGACAAACTGCACTATAAGAATTGAAAGATACAAAACAGTCACTTAAGAGTTCTCCTGTGGACAATGGAGAAGCTATGTTAAGCAAATGCTGGCAGGGAGAAGTGACTGACAGGCATTGTAGAGAGATCAGGAAAGTCTGTGTGCACACTGTACAGCTGTTTTATATAGTATAAAAATATGATGTTTCTTGTTCCC
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000016837:ENSGALT00000036558:34
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=1.000 A=NA C2=0.494
Domain overlap (PFAM):
C1:
NO
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]