GgaINT0133149 @ galGal3
Intron Retention
Gene
ENSGALG00000004097 | LRRC38
Description
NA
Coordinates
chr21:5346787-5361695:+
Coord C1 exon
chr21:5346787-5347424
Coord A exon
chr21:5347425-5361627
Coord C2 exon
chr21:5361628-5361695
Length
14203 bp
Sequences
Splice sites
5' ss Seq
AAGGTAAAG
5' ss Score
9.06
3' ss Seq
CCCTCTCCTCTTCTTTGCAGGTC
3' ss Score
12.81
Exon sequences
Seq C1 exon
ATCCTTGACGATGTGGCCATGCTTTCCTCTCTGCCTTCTACCCTCTTCTGTCTTTGTCTGCCTGCTCTTCTTACCCGCGGGTCATCTTTGCCCTGCTGTCTGTAGCTGTATGGACTACCACACCATAGACTGCCGGGATCAAGGACTCCCCAGTGTTCCCAATCCGTTCCCATTGGACGTGCGGAAACTTCTTATAGCCGATAACAACATCCAGGCGATACCAGCTGATTTCTTTATATTTTATGGAGACCTGGTCTATTTGGACTTCAGGAATAACTCCCTCACCTCTTTAGAAGAGGGCACTTTTAGCAGTTCTACCAAACTGGTGTATTTAGACTTAAGCTACAATAATTTAACGCAGCTTGAAGCCGGGATATTCAAATCGGCAGAAAAACTGATAAAACTCAGCCTGGGAAACAACAACCTGGTGGATGTGGACGAGGCTGCTTTTGAGAACCTGGAACAGCTCCAAGTGTTAGAACTGAATGACAATAACTTACAGAGCCTAAACGTGGCAGCCCTCGAAGCGCTTCCCTCCCTGCGGACCATACGCTTGGAGGGCAACCCGTGGGTCTGTGACTGTGACTTTGCCAATCTTTTCAGCTGGATCCAGGACAATGCCTCCAAGCTCCAGAAAG
Seq A exon
GTAAAGCTGTGTGTGTGTGTGTCTGTGTGTCTGTGTGTCCTGCCTGCAGTGACCCCGACTGCCTTTTGGTCAGACTGTAATTGCATGCTTCCAACAAACGAGTCCATTAAAATGGTGTTGGTTTCTTTCTAGCGGCGGGTCCTCCTCCCAGCTAAGGAATAAATAGTTTTGATTTATAGGCTGAAGTTGCATAGGCAGTGAAGGAGCCTTTTCAAATCCGTTGTGCCCAGAGCTGCTTCTCTTCCAGACATCGGTTTCTTCCCGGTAAATACGTTCCACAATGAGCCCTTTGAACAGCTGAATATCCTGTGCCAGCCCCTTAGGAAAACTGTGCTCTCTCTCATTTTCCTGATCAGCCACAAAGCTGCTGCAGAAGAGTTAAATCCCCATTTTATGCAACTGTGGCTGCCAGCCCTTCTCCAGAATTATTTTGTTGCGATGCTCTGAAGCCCTGTTTGGTATTTCGATCATGGTGCCTTTATTAAAATAGCCCCGCTTCCAATATTAGGAATAAATGAAAACACTCTGGAACATCCTCAATGCAGGATATACAGTTCTGGAATTTGAGCTAGTAATTTTCAGAAAAGCATTGGGAAAAAAAAAAAAAAAATAAAGCAGTATTCAGGCTGCCACGTGTGGGGCTTCTGCTCCACGTTTCCCATCTGACCCCAAAGCCACCGCTGATCCAGCTTTAGCAGATCACCTCACAGTTCACTCCTCCCAACAAGCACCAGGGCACCCAGTGCTGCTATCGAGCTGCCCTGCTGCTCATAGAAGGGGAAATGTAAGGGCTGCCATGGGGATATGGGGGTGCAGGAAGGCCGTGGTGCCTGGGCTCTGCCTGAGGGCTGTCTGTGCAGGGGTGAGGGGTAGAAGGACATGGGAGGAGAACTGCAGAGAGTGGGCTGAGGTCAGGGAACTGTTCTCTTGGCTCCAGATGCAGAAGGAGGAGGTCTCCCCTCTCTCCATCATCCATTTGCAATCACTTATTCGAGCTCTTTCTGTGCTCGTGACCTTCAGTGGCAATTTTTATTATACTCAGCTGGGTTGCCCTAAATATTCTTAGCTGTTCAAATATATATATGTATCTATTTTAAGGAAGAAGTAATTTGAGGAAAAAGGGATGGATTTTTTTCTGCCTGCCTGAGTGAAGCTTTCCCCTTTCCCTTCTTCCCTACCCCCTTGCCATTTTCCCTTTTTCCCCTTTTTCCCCTCTTTCCCCTTTTTCTCCATTCCCAGCCAAACTCACTGCTGTTCTCCCACATTCCCCAGTGCCCCAGCTGAAGTTCTTTCTGACCAAAGCATTTGCCTTTCTCGCACTGGCCCTCAGCCACTCTTGCCTTCCCCATGCTTGCCACCTTTTCATGGACCTGTAGCTCCTTCCCCTTCACCCACACTGAGTCTGTTCAGTTTGAAAGAGGCTGTCCCAACCCATCTCTCTTTCCTTTCTCTCCTGTCAGTGCTCATCTGAACTTCTTATGTCTGGAAATCTCAAATGATCAAGCTTTACTGTAGTACTGTCAGTGTTCCTCAACTGCTTCAGTATTTCATCTCATCCAAAGTAATGGAAGCTGCATTTCAGCCATACAGCGAAACAATTACCAGCCCACCTAGATCTTTCAAAGCAAGAGAAGGAGGGAAGGAGCAACCGTTCAAATGGTTGCTTCTTAGGTCAGTTCCTCCCTTCCCATCCTGGCCTCAGCGATGCTTTGCTTTGCACTTAGTGTGGGCGCGGGGCTGCTGAGCTCTTGGCAGCCCACGTGTGCTCAGTGCCTGCACGCAGAGGGCTAAACCCAGTGCTCCGTTGTTTGTGGGCCATGCTTGTCTAAAACCCTTCACGTGGCATTTCTGGGGGTGTTACACCTTCCCCAGCAGGAGTGGGGAGAGCAGCTCCCAGTCTCACCCTCCTGCTCCCTGTTTGCTCCCATTGCTGCTGGATGGCTGGAGATACTCATCCGTGCAGCAAACACAGAAAAGTAGGGCAGCAGCATTGTCTGGAAACACTGCCAAAGAAAAAGACTGGAATACGTTTCCAGGGCCCAAGGAAAGAACTTACTTACCTTGGCTGTATACTTTTATAATGCTGCAAAAAGCATTTCCATTGCATGGCCGACATGAGTGGAAAAGGGAAAGGCAAAAAAAACAGGTTGTGGTGCTTTTCTTGTGTTGATTTTCTTTAAGAATATGCTGTGATTAACACTACAGAGTAGTTTTGTGACAGACTGACACTCCCCAGACATCAAATGACAAACACTGTGACCTGGATTTACTGAGAAGGGAAAGAATAGAGAAGGGTGAATGACAGCAACTTGCACTGGGGATCCCCAGCCCTTCACAAAAAGCACAGAGAGCTGCAAAGAAGCCAATGGCTCTTTGAACCCTCGTGTGTTTTCTGCTTGGGATGCTTCAGAATTAGAAAGGAAAAGGATGTGCCAAAGGTGAGGTATTGGCACAGGTGCTCAGGGAGTGGTGGGGTCACCATCCCTGGAGGTGTTCAGTGTGGAGATGTGGCACTGAGGAAGGTGGGCACAGTGGGGTGGGTTGGGGTTGGACTCGATGATCTTAGTGATGTTTTCCAACCTATTTTGGTTCTTCACTCTGATCGGCACTTGGGATAGTTCAGTCTGCTCTGCCTGCATGTCTAAGAGAAATCACTCAGGCTGTAACCAGTCACAAAGCCCAGCTGCTGTTCCACCTTTGAATTTTAGCACTGCAGTAAAATATCATGCTGGTCAGACCTGCCTTTGTTTTCTGCAGAAGAAATACCAAGTTGCTTTAAAAATCAGAGTTTTGTCAGTGGGAACTGAAATCTCACTAATTGATCCTCTCACCACCTCTGCACCTCCACCTTTCCACCTCTGCAATTAAGGCCTGTGGAGAGCTGGGTGATCTGAACAAAAGCCATCCTTCAGCTCATTAGTCTCACAAAAGCCAGGTCCATTTCCCTTCTGGCACACTCCCAGAAAAAGCGTGTAAAGCTCTAACTTTGCTGACCTGTCTGACCAGCTGCCTGGAAAGCCTCATCTCAGCTCTGCTGCCTTTGCAAATCTGCCTTGTCGCGCACACAGGCAGCTGGGATCTGCATCATTGGAAGGCATTTATTCATCCATCCTGAATTTCTAACTAAAGCATTAATTGGCGATGAGAAAGGCGCGTGGCAGATTTGCAGGTGGACTTAGTGGAGAAACTGCACTAAAAGTTTTGCTATTAAAGTCAGCACTATAGCTGCTTTAAAAAAGCAGATCTTATTTTTATATTTGTGAGAAAGGTGTTAATAATGGGACTCCCATCATACTTGAAAACTGAGCCACATTTTGGATGTGGTCAATAACTGCAGGGGAAGGAGCTGTGAACACAGTGATGTTGAGTGGAGAAGACGTAACTGCTGTGGTTTTCTTCTTGAGGAGACCCATGGAGATAAGAATACTGCATAACTTCTTTTGGAGGAGGAAAAGCTTTTGGAAGGTCTCTCTCCTGTGCTCTGTAGAGATCTGCTGCTGATTTTTCTTTCCATGAACATGCTTTGGGCAGCTGTGCCCACCACCTTGTTCGCTAATGTCCAATGTATTTTTAACATGACTTTTAATTAGCACTTAAATATTCTTTAGCATGTGACTGTAGTGTCTCCTTTCCTTCAGCTTGCCCTCATTTCTTTCTTTGTATTTCTTTCTTCCCAGCATCTTTGAAAGACCTTCTCAAGAAGTTGTATATCATTTCTGGGACTGCAGGTGCAGTGCTAGATGCAATGGTGCTTTCTCAACCTTTCGTGTTTAGTGCATATTCTATGTAATGCATGAATGAAAGGTTTTGCTGCCCTCATCATTAAAATAGCATTAGAAAGACTTGAAATAATGTGGTGAGATGGTTCAGATTGAGCATTATGATGTGTGCACTGCTATTTTCAGAGTGACTTCAAAAATTCATTCAGCGTTGGCCAAAGACAGCAGAGGTGGTGATGGAACTGGTAGCAATGGCACTGATGGCAATGGGAATGGTGGCGATGGGACTGGTGGTGATGGGACTGGTGGTGATGGGACTGGCAGTGGCCTCTGAAGCTGGAAACTCCAACTGAATTCAGCAGTACTTGGGAGGTTCAGAAGTGAATCAGTGCAGTGAGTATGGAATGGTCTTTGTAAGACGCTTTACAAAGGCTGGGCCATAAGGTGATGATCTCTTGGCTCTCAGGATCCTTCTCTAATCTCATTCCAATCTAAGATATGCTATTAAATAAATGTATTCTGTAAATTAAATAAAATAACATGCCGTTTCACTAATCTAGGCCCTTAGAGCAGCCCTTACTGGCTCACTGAAAGCCGTGACCATTGTCCTCAAAGCACAGCATCACAATTACAGGTGGGTACGGTCTGCACGTGGTCTTCTCACCTAACCAGAAAGTGCACAGAGCTTTGGGAAGCTGTCTCAGTCTCCCATTCTTTATTACTCCCCATATTCGTCCGCTCTGTGGAGAAGGCTGCCTTATTTTCATGTACTAATATAGAACCAGGGAAAGCTTCAGCTAAGAAGGACAGGCTGTTCTGCTCTTCTGGCCATTGCAGCCATTCAGTTCTTCCCCAGGAATCATGCACATGTTGTCCATGACTGGGACAGAACATAATATCCAGTTTTTGGAAAGGAACTGAAAGCCTTAAGACTGCCCATTCAGCAGCTTTTCTTCTGTTCAGGCAGAAACTCCTAACAGGAATAAGGTTCCCTAACAAGCGCAACAAATCTGTTTCTATATATATCCATATATAAATACATAATGTGATATNNNNNNNNNNGTGGGCTGAGGTCAGGGAACTGTTCTCTCGGCTCCAGATGCAGAAGGAGGAGGTCTCCCCTCTCTCCATCATCCATTTGCAAACACTTATTCGAGCTCTTTCTGTGCTCGTGACCTTCAGTGGCAATTTTTATTATACTCAGCTGGGTTGCCCTAAATATTCTTAGCTGTTCAAATATATATATGTATCTATTTTAAGGAAGAAGTAATTTGAGGAAAAAGGGATGGATTTTTTTATGCCTGCCTGAGTGAAGCTTTCCCCTTTCCCTTCTTCCCTACCCCCTTGCCTTTTCCCTTTTTCCCCTTTTCCCCTTTTTCCCCTCTTTCCCCTTTTTCTCCATTCCCAGCCAAACTCACTGCTGTTCTCCCACATTCCCCAGTGCCCCAGCTGAAGTTCTTTCTGACCAAAGCATTTGCCTTTCTCGCACTGGCCCTCAGCCACTCTTGCCTTCCCCATGCTTGCCACCTTTTCATGGACCTGTAGCTCCTTCCCCTTCACCCACACTGAGTCTGTTCAGTTTGAAAGAGGCTGTCCCAACCCATCTCTCTTTCCTTTCTCTCCTGTCAGTGCTCATCTGAACTTCTTATGTCTGGAAATCTCAAATGATCAAGCTTTACTGTAGTACTGTCAGTGTTCCTCAACTGCTTCAGTATTTCATCTCATCCAAAGTAATGGAAGCTGCATTTCAGCCATACAGCGAAACAATTACCAGCCCACCTAGATCTTTCAAAGCAAGAGAAGGAGGAAAGGAGCAACCGTTCAAATGGTTGCTTCTTAGGTCAGTTCCTCCCTTCCCATCCTGGCCTCAGCGATGCTTTGCTTTGCACTTAGTGTGGGCGCGGGGCTGCTGAGCTCTTGGCAGCCCACGTGTGCTCAGTGCCTGCACGCAGAGGGCTAAACCCGGTGCTCCGTTGTTTGTGGGCCATGCTTGTCTAAAACCCTTCACGTGGCATTTCTGGGGGTGTTACACCTTCCCCAGCAGGAGTGGGGAGAGCTCCCAGTCTCACCCTCCTGCTCCCTGTTTGCTCCCATTGCTGCTGGATGGCTGGAGATACTCATCCGTGCAGCAAACACAGAAAAGTAGGGCAGCAGCATTGTCTGGAAACACTGCCAAAGAAAAAGACTGGAATACATTTCCAGGGCCCAAGGAAAGAACTTACTTACCTTGGCTGTATACTTTTATAATGCTGCAAAAAGCATTTCCATTGCATGGCCGACATGAGTGGAAAAGGGAAGGGCAAAAAAAGAGGTTGTGGTGCTTTTCTTGTGTTGATTTTCTTTAAGAATATGCTGTGATTAACACTACAGAGTAGTTTTGTGACAGACTGACACTCCCCAGACATCAAATGACAAACACTGTGACCTGGATTTACTGAGAAGGGAAAGAATAGAGAAGGGTGAATGACAGCAACTTGCACTGGGGATCCCCAGCCCTTCACAAAAAGCACAGAGAGCTGCAAAGAAGCCAATGGCTCTATGAACCCTCGTGTGTTTTCTGCTTGGGATGCTTCAGAATTAGAAAGGAAAAGGATGTGCCAAAGTGAGGTATTGGCACAGGTGCTCAGGGAGTGGTGGGGTCACCATCCCTGGAGGTGTTCAGTGTGGAGATGTGGCACTGAGGGAGGTGGGCACAGTGGGGTGGGTTGGGGTTGGACTCGATGATCTTAGTGATGTTTTCCAACCTATTTTGGTTCTTCACTCTGATCGGCACTTGGGATAGTTCAGTCTGCTCTGCCTGCATGTCTAAGAGAAATCACTCAAGCTGTAACCAGTCACAAAGCCCAGCTGCTGTTCCACCTTTGAATTTTAGCACTGCAGTAAAATATCATGCTGGTCAGACCTGCCTTTGTTTTCTGCAGAAGAAATACCAAGTTGCTTTAAAAATCAGAGTTTTGTCAGTGGGAACTGAAATCTCACTAATTGATCCCGAAACTCTCCACCTCTGCAATTAAGGCCTGTGGAGAGCTGGGTGATCTGAACAAAAGCCATCCTTCAGCTCATTAGTCTCACAAAAGCCAGGTCCATTTCCCTTCTGGCACACTCCCAGAAAAAGCGTGTAAAGCTCTAACTTTGCTGACCTGTCTGACCAGCTGCCTGGAAAGCCTCATCTCAGCTCTGCTGCCTTTGCAAATCTGCCTTGTCGCGCACACAGGCAGCTGGGATCTGCATCATTGGAAGGCATTTATTCATCCATCCTGAATTTCTAACTAAAGCATTAATTGGCGATGAGAAAGGCGCGTGGCAGATTTGCAGGTGGACTTAGTGGAGAAACTGCACTAAAAGTTTTGCTATTAAAGTCAGCAATGTAGCTGCTTTAAAAAAGCAGATCTTATTTTTATATTTGTGAGAAAGATGTTAATAATGGGACTCTCATCATACTTGAAAACTGAGCCACATTTTGGATGTGGTCAATAACTGCAGGGGAAGGAGCTGTGAACACAGTGATGTTGAGTGGAGAAGACGTAACTGCTGTGGTTTTCTTCTTGAGGGGACACATGGAGATAAGAATACTGCATAACTTCTTTTGGAGGAGGAAAAGCTTTTGGAAGGTTTCTCTCCTGTGCTCTGTAGAGATCTGCTGCTGATTTTTCTTTCCATGAACATGCTTTGGGCAGCTGTGCCCACCACCTTGTTCGCTAACGTCCAATGTATTTTTAACATGACTTTTAATTAGCACTTAAATATTCTTTAGCATGTGACTGTAGTGTCTCCTTTCCTTCAGCTTGCCCTCATTTCTTTCTTTGTATTTCTTTCTTCCCAGCATCTTTGAAAGACCTTCTCAAGAAGTTGTATATCATTTCTGGGACTGCAGGTGCAGTGCTAGATGCAATGGTGCTTTCTCAACCTTTCGTGTTTAGTGCATATTCTATGTAATGCATGAATGAAAGGTTTTGCTGCCCTCATCATTAAAATAGCATTAGAAAGACTTGAAATAATGTGGTGAGATGGTTCAGATTGAGCATTATGATGTGTGCACTGCTTTTTTCAGAGTGACTTCAAAAATTCATTCAGCGTTGGCCAAAGACAGCAGAGGTGGTGATGGAACTGGTAGCAATGGCACTGATGGCAATGGGAATGGTGGCGATGGGACTGGTGGTGATGGGACTGGTGGCAATGGGACTGGCAGTGGCCTCTGGAGCTGGAAACTCCAACTGAATTCAGCAGTACTTGGGAGGTTCAGAAGTGAATCAGTGCAGTGAGTATGGAATGGTCTTTGTAAGCCGCTTTACAAAGGCTGGGCCATAAGGTGATGATCTCTTGGCTCTCAGGATCCTTCTCTAATCTCATTCCAATCTAAGATATGCTATTAAATAAATGTATTCTGTAAATTAAATAAAATAACATGCCGTTTCACTAATCTAGGCCCTTAGAGCAGCCCTTACTGGCTCACTGAAAGCCGTGACCATTGTCCTCAAAGCACAGCATCACAATTACAGGTGGGTACAGTCTGCACGTGGTCTTCTCACCTAACCAGAAAGTGCACAGAGCTTTGGGAAGCTGTCTCAGTCTCCCATTCTTTATTACTCCCCATATTCGTCCGCTCTGTGGAGAAGGCTGCCTTATTTTCATGTACTAATATAGAACCAGGGAAAGCTTCAGCTAAGAAGGACAGGCTGTTCTGCTCTTCTGGCCATTGCAGCCATTCAGTTCTTCCCCAGGAATCATGCACATGTTGTCCATGACTGGGACAGAACATAATATCCAGTTTTTGGAAAGGAACTGAAAGCCTTAAGACTGCCCATTCAGCAGCTTTTCTTCTGTTCAGGCAGAAACTCCTAACAGGAATAAGGTTCCCTAACAAGCGCAACAAATCTGTTTCTATATATATCCATATATAAATACATAATGTGATATCCTAGTCATTTTCAGTAAAATGATCTGACTGCCACTGGCTTTTCACTCTATTTCTTCCATCATAAGGATTTTTGGAGTACATCCATCTTTCACAGATTTCAAGACACGAGGACAACATTTGCAGCGTGGCACCTGATGTTAAACTTGATATTTAGACATTGAAGCAAACTGTCGAGCACCTTCTGATATCAATGTAGGAAACTCTGGGGCATTTGACCATTAAAAAAATTATTTAGAGATCTAAATATAGGCCTCAGGTTTCTTTAAGCCTTACTTTTCTGGTAGCTTGAGGCTGACTTTAATGAAATTCCATCTCTCTTCAGAGGCAATGCCTCTCTCACTGTTTATTAATACATCTATTACATCAGTGACGATGTTTAAGTAGACTAAAGAGAGCTATAGCCGGGGGCAAAATACCATACAAGAAATTAAACGCCACATTTAAACATTTCAAGTGTGTGTAAACTGCATTCAGTGATAACGGAAGAACAGCTGAATTCCACCCAAAAGGGCAAATCACAGAACCATAGAATGGCCTGGGTTGAAAAGGACCACAGTGACCACCTTGTTTCAGCCCCCTGCTATGTGCAGGGTCGCCAACCAGCAGCCCAGGCTGCCCAGAGCCACATCCAGCCTGGCCTCGAATGCCTGCAGGGATGGGGCATCCACAGCCTCCCTGGGCAACCTGTTCAGTGCGTCACCACCCATTTTCTACTATTGTTCATTGCCAGCTGCTAGGAAACTATCTTAATATTTGTTTCACGTGAAGTCCACAAAACCCAATAGAATTGAGGCCTCCCTCTCCCGTTTTTTAAACTCAGCATCCAAAACAGAGCAGCATTTCTCAGCTGTAGAGGGCTAACAGGCCATAACATTGAAGTAATAATGACTTTCAGATGCTATCCCATGAAACATTTAGTTTGCACAGGTATTAAGAAATCATAAGTGTTATAAGGAAGCAAATGCACACAGAGTGCTTAAAAAGTCAGGCTGACCTGGGTAAGTGATACGTATTGCTGCTTTTCTTTAAGCAAAGGAATATGAAACAAAGGCACCACTCAAAATACTCCAGCAGTCAAAATATGTAAGAAAACCTCACGTTAGATGCAAGGGCAGGTAACTGGAATGCAGTCAATGGTTGAGCCAATGCACCATTGGAAGCATACTGGTCCAGCAGTTCCTATGATGAACACGGTTGAATCACAGCTACAAGTACCAATGTTAATGGAGGTTGGTACCTGGTTTTTGTTTCTGTTTTTTCTTAAGACAGAAAGATCACTGTAGTTAAAACTTGGAGCAGTGCAGAGCTACCATAGGTCTATTTTCATTAATTTACAAGGGAATTAATTATTAATCATTTGCATGTGGTTTTGTACAGACTGCTTTCAAACTGCATTCATTTTCTAAGAGTTTCATCTTTCCAGGGAAAGTATTTCAGCCTGTGACTGCAGGACAAATAGAGCTGTGCGTAGTCCTGTACCAATGCAATTAGAATCTGGCTGAAGTAATTGCTAGAAGTGATTGTCGAGGATGAAGCCCTGGGCTGCAGCAGAGTTACAGACCTCCACGGGCAAGGCATCTCACAGTCACATTCTTTGAAAACCTGTGAGGGAATTTCATTGAAATGAACTTCATCTGGAACTCCCCTGCATCACTGCAGTCTGTAAAGAATTGTATCTGTTTTCTTGTTCTAGAGTCCCAGCAATTTCACACTTCCCCTGTTAGTTAGGTGATCTGTTCCCATGTTTTTATCTCATTTGTGCAGCATTCAGTGCCTGGATAAAATCTTAACACCTGTCCCTTGAGTGGGACTTCAAAGCATTCCCATGTGAAAAGCAAGCAGTGCATTACATCTGCATTACAACCACATTGCCACTGTACTGCATGGGCTTCTTCAGACGACATAGCAGAAAGACAGAGCGTGTGACATTGTCCTTGAGACAGCTGGAGTTCCTGCACATAATGCAGTGACCCTGACCAAAATAACATAAGCTGTGTATTTATAACATGCTCACACTTGTTATTTCATTTACAGATTTGTTTGGTGACTCTCTGAACGTGTTGTGGAAGCAGGGAGATATATATATATATAACTGTCATCAAAGGGTTGCTCGCTGCAGCCAAGCACTGAATATCAGACCTGTTGGTGATGCCCTTTGCAAGAAGCCTAGCTGGATTTTAAAGAATAAGTTGGCAGGGTTCTACAGTATTAAATGAATATATATATATTATGAAAAATAATATAATTTAAAAGGTCAAAATGAGTGAAAGTAGATGGCTAAGGTGAAATGGCACTGGGAGTGGTGTGGGTTGTTTAGAGGCTGTGAAATGACGTGGGATTACTTTCTGCCTAAGCAAGGAACTAAGTGGGATCTGTTGCTGGGCATGGGTGTAGTGGGACAGGTGAAGCATAGGACATCAGTTCACTCAGAATGGATTCTCATTTGTTACAGACAACCTGATATGGTATGATGTAAAGAAAGTTCTATGTTGCTATGGAGGAAAGCAGATGAAGTGGTTTTGATTACGTGCTGTCCTAAGCAGCAGTGTGCATGGCCTTCGTAATATGATGTGGTCAGGTATGCAGAGGGAAGCCTGGTCTAACACTGACTGCATCTGCTTTGTACAGAGACACTCCTTGGGTCAGTAGAATACAGCTGCTTGGTGCAGGCTTCTGATTTCTGATGCTGTATTTTGCTTATTGATATCAACTCTTTTCAAAGACAAAGAATTCTGCAGAAAGGTGAGGCTCAGGTAGCACTTTGGGGCTGTGGAGAATGAAGAGAGTAGAAAACCCCTTATCTCTTTGTTTGGGAGCATGACCTAGATTTCATTACCCGTGGCTGCATGGAGAGAGAAGAGCTTTTATATCCTTTTACTGTCTAATCCGACTCAAAACTCTTACAATACACTGGTTTGCATAGCAAGAAATACCCTGTAAGTGACTTGGTATGTTGCAGGTATTTTTCTACTTGTATTCTATGTACTGTGATGTTAGATGGAAGCATTGAGCAGCAAGAATAGTCCAGAACAGGGAAAGTAATTGTAAACAGCTCACCTGTGCAGTCTGTCCTTAGGCGTGCTGAGGGCAGGGCTCAGCTGCTCTGCAGACAGCAGTTCTCCTAACACTGTACCACTCATTAATGGTTTGCTCTGCAGTTGGTGTAGAAAACTGCTTTTTCTTCTACTTGCTGTAAGGGAATGGCATTTGAGGTGGTATATTCACTTGGACCTGGCTTTTCTGTCGAAACATGCAATGATCTTTTCCTATTAGCCAGGATCTTCCTCTCCAGGCCAATTTTCAGTAGCTTATACTCATTTTCTTGCTGTTTCTATGCAATAGCAGTAACTGCTTTTATTACTCTGATTTAAAGAGAACTTTTGTGCTTTTCTAAACTCTGCCAAAAAAAAAAACAAGACACAGGCCTTGTTGTCCAAGCCTGGTGCTTTTCACTTCTCCTTCATTTCTCATGGACTGAAACACGGAAAGGTAACCATCCCCATCCTCTTTGGTTTGTCTCTCCTATTTCCCCTTTGAGTTTCTATTCTGAGGACAATAAGGACGTGGTGCTGCCAACCCCAACTTCTCACAGAAGAGAGCTCTGTACATGGAGCCCTGTCACGAGCTGTGCGGTGCAGGAGTGTGTTCTTCCTCTTCCATCTGTGCAGGCACAGGCACACTCTGGGGCTCCAGTATGTCGGCCTGTCTGCAAGGCATGAGATAAATACGAGTACTGCAGGTTCCCCATTTCCAAAAGACTCGGAAGATGTCTGAAAGCAGGAGGATCCTCCACCTTCAAGGCCAGGGGGGTTCAGAGGGCTGCAGAGCACATTGCTGCACCATCTGCCGTGCTCCGGGCTCAGAGGAAGAACGTTGCTTGTGTTCAGGTGGCAGCCTGCCTAGAGGAAGCCGTTCAGCCTTGGGCAGGCTGACTGCTGTCCTGTTCTGCTGGCAGCTTTTGTTACGTTGTGGGAGAGAGGAGCATGAAAAGGGAGGCTAGCAGCAGAGCTGCAGGCAGATAGGCAGATAAGGCAGATAGAGAATGGCTTTTGGGAGCCAAAGTTTAGTAAGCTCATCATCATTACAGGGCCAGGTAAGTCAGGGTGATAAATGAATCCCTCCCTGACTTGGCTAAAGCTCCCTGTCACATCAGCATAACAGCTGGGCTGCATCCAGGTAAGCAGTCGGGTTTGCACCACTAGTGCTGGAAGCCCGGGGTTTGTAGTAAAACCTAATGCACTGTAGCAAATCAACCACAAGGAAAATGAAAATCGTAAAGCAGATGCACCCATCCCTTCTGCAGAGTGGCACAGTGTTGGTGCTTTGCTGGAGCTGTGCAATGGAAGCCTCCCATGCACTGCACACACAGCAATGCAGTCAAAAGCTGGGTCTGTAGCAGACAGAGAGCAATGTGAGTCCAATAAACCAGTAGCACTTCTCACCTCACTAATGCACATTTCTCATATTTCCCCTTTACATTCATATCCTCAGCAGCAGATAAAAGCTGTCTTGCTAACAGTGATACAGACCTGATTCCTTCAGTGTTTGTTCCATTCTAGCCCTATTTATATACTCTCCCTACTTTCCCTCTTGTAAATGAGGTAAATGGGGATATGCAGTGGGTTACGCTTTTACTCCCTGCTACCATATTATATTCCTCACCATTTTTTGAATCTGGACATTTTTGCTTTCACTATGAACAACGTGGCTCTAGGCATCCTTCAGCAGTGCAGCGAGGCATAATGTCTGCTAGTCGGCGTATCTGCTGAGAGTTGGAGAGGAAAGGTTGAAAGAGGTCAGAGTCAAACGAGCATCCATTAAACCTGAGTTGTCATTTTGACCAGAAGAAAAGGGCAGCTGTAGTTGTGTACTGGGGAAAAAAAAAAATAATAAGGTGTAGAAGACACCAAAGTGCGGAAGGAAATTCAATATCCCAGTTGTCCCTTTTTGGAGTGAGAATGTGTGTTCAGAGGCATTAGTAGGGAAATGTTCCTGGGCCTCCAGGTGTAGATGCATCCTGAGTTCAGCAGTCATGCTTTGAATTCTCAGAATCACAGCCCCAGGTCACATCATAGAATCATAGAATGGCCTGGGTTGAAAAGGACCACAATGTTCATCCAGCTCCAACCCCTGCTATGTGCAGGGTCACCAACCAGCAGCCCAGGCTGCCCAGAGCCACATCCAGCCTGGCCTTGAATGCCTGCAGGGATGGGGCACCCACAGCCTCCTTGGGCAACCTGTTCAGTGCATCACCACCTTCTGGGGGAAAAACTTCCTTCTAATATCCAACCTAAACCTCCCCTGTCTCAGTTTAAAACCATCACCCGGAACATCACCTGGAAGAGTAAAAATGAAACAGCGTAATGGGGGGGTGCTCCACAGGGCTGTGGAATGGCTTTTGGATAGTGGCAAATTTTGTTCTTTTATTTTTCCTGAATTTCATACAAATTCCTGAGCCTAGAAATAACCCTTAAAACATTTTCCTCAGGCATGTGTTCTCTGTCCAGAGCAACAGATGGTTTCATCAATATTCCTCTGATTTGTTTCCCTCTCCTCTTCTTTGCAG
Seq C2 exon
GTCTCCATGAAATCCAGTGTTCCCTGCCTGTAGAAAATAGAAGAATCTTTCTGAATGAATTATCTGAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000004097:ENSGALT00000034985:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
ORF disruption upon sequence inclusion (1st CDS intron)
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.097
Domain overlap (PFAM):
C1:
PF120783=DUF3557=WD(100=57.1),PF138551=LRR_8=WD(100=28.6),PF138551=LRR_8=WD(100=28.6)
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Associated events
Other assemblies
Conservation
Cow
(bosTau6)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]