RnoINT0086881 @ rn6
Intron Retention
Gene
ENSRNOG00000015264 | Lrrc38
Description
leucine rich repeat containing 38 [Source:RGD Symbol;Acc:1311416]
Coordinates
chr5:162031722-162053723:+
Coord C1 exon
chr5:162031722-162032757
Coord A exon
chr5:162032758-162052409
Coord C2 exon
chr5:162052410-162053723
Length
19652 bp
Sequences
Splice sites
5' ss Seq
AAGGTGAGC
5' ss Score
9.6
3' ss Seq
TTCCATCCATCTCTCCCCAGGCC
3' ss Score
11.45
Exon sequences
Seq C1 exon
CCAGACACGCCCCATGGAAATCGCTCCAGGGATCCGTCACTGAACTTAGTCTTGAGCACCGCTGGCCAGGTCTGTGCGACAGGTCCCAATTCCCCGCCCGAGTAGGGTCGCGCTGGGCTCCCTCCGCGGTCTCCACCTGTGCTTTGGAATGTTCCAGAGGGTCAGTTTCCTTTGCGGGTGAATTCTGCGCCCAGCACCTCTCCTCTGCCTCCTCCCTCCCCGCCGTCCCGACACCCCGGGTCGTTCTGTCCCCGCCGCACTCTCATCGCCCCCGCGCACCCCTGCGCAGCCTCCCCGCCCGGCGCCGCTGCCCTGGGGCTTTCGGCGCCCGGGAGTCAGGGCCCCGCTGCGTCCTCCCCGCCGCGAGCCGAGTCCTCCGGAATCCCCGGGGACATGAGTCTCTACGCTGTCCCCCGCCGCCCCACGGGCGCCTTTGCGGCGCTGGGGCTCGGTAGCCTCCTGGTGCTGCTCGGGCCGGGACGCGCGTGCCCCACGGGCTGTGCCTGCACTGACCCCCACACGGTGGACTGTCGCGATCGCGGGCTTCCTAGCGTGCCCGATCCCTTCCCGCTGGACGTGCGCAAGCTGCTAGTGGCCGGCAACCGCATCCAGCAGATCCCCGAGGACTTCTTCATCTTCCATGGAGATCTGGTATATCTGGATTTCAGGAACAACTCGCTGCGCTCGCTGGAGGAGGGCACGTTCAGCGGCTCGGCCAAGCTGGCCTTCCTGGACCTGAGCTACAACAACCTCACCCAGCTGGGTGCCGGCGCCTTCCGCTCGGCGGGGAGGCTGGTCAAGCTAAGCCTGGCCAACAATAACCTGGCCGGTGTACACGAGGCCGCCTTCGAGAGCCTGGAGTCCTTGCAGGTGCTGGAACTCAACGGCAACAACCTGCGCAGCCTCAACGTGGCGGCTTTGGATGCGCTGCCGGCGCTGCGCACTGTGCGCCTGGACGGGAACCCCTGGCTGTGCGACTGTGATTTCGCTCACCTCTTCTCCTGGATTCAGGAGAACGCATCCAAACTGCCCAAAG
Seq A exon
GTGAGCCAGAGGGTGGCTGGAAGCCAGGGCTGGGTGGAGAAGGGAAGGAGAGGGAAGAGGCCAGCACGGTCTGGATGTGTGAGGCCTCGCTTTGAGGCTTTGAGGCTCACCAGAAAGTCTCCTGAATGAGGATCCCTGTGGTGTAACTCCGTAAGATCAGCTGCCCGAAAATCTCGGATATGTTGGCAAAGAGTGTTAGAGAACACATCCGGAACTCTTCCAAGTTTCTCCCTTTCTTCACTTGCTACCCAAGTTTAGGACCCGCCCTTTCTCCATCATTGTGGTCCCCATTCTCTCTGGGAGCTTTTAGGTCCTAGGACAGGTGGGTGTGAGCAATGTACCCGACCCTCCTAGTAGGAAAACCCCACGCTTTGTAGGACACCATACCATTTCCAGACCCCAGAGGTGGAGAGGAGCTGGCCAGTCCTGAACACGATCTGGCTGCCACAGATTCGAAACCGGTCCCTCTGTTCCCATCTCTCTTTGACTCTTCAGTCCACCCCTGGTGAGGAAAATTGCCGGTGTGAAATGTGGGACAGAAACCCTTCGGGTGGGCACCTCCCCTGTTTTCCTGCTGCCCCTCCTGATGACCCATACACATACCCAATTGGCTGATGGGAACACAAGAGCATTTGGGAACACAGTACCAAGGAAGTAAAGGCAGAACTGAGAAGGCAGGGACTCCAACACTCATGGGGTGCGTGCCAGGACCGAAGGGAGGTGATATCCTTATGTTTCTACTTGTGAGACTTCGAGCAGTGGCCCAAATTGACCTCTCAGAAAAAGTCCTTAAAACTTTGGCGAAATTGGCTGCGGTCCAGTATAGCAGACATTATAAAAGGTGGCATAGCTGTGATCTTTTTTTCCTACAATTGAGAGCTCAGGAACAGTGTTCCTCTGTGTATGGGACACTTTCTCTAATGGCTTAACTGTGTAACAGTTAGTAAAAGATTTGGCTTGCAAGGTGCAGAGTCTCCCAGGTTTGAAAGATGCCCTTGTTCTCCTGCCTCCCTCCTCAGATCTGCCAGGAGATTCTGAATGATGGAAATGTCCCATGAAAGCCCTCGCTGGAGAGAGGGTCACCTTGTCTTTGATCGCCCCTGTCTTAGTGGACTGCTTCTCAGTTACCCGACTGTGCATCCAGCTTTCCAGTTCAGGGCAAGAGCTTAGGTTCTGTTTTCAGTGATGCTTTAGGTGACTGGGCCCTTGAGTGGGCCCTTAATGCTTCTGTACCTTGGCTTCTTGTCTCTCCAGTACTTGCGTTGACCTCTGACAACTCCACAGAGCCTTGGGTCAGAGTTGGAAGTCATGGGTTTGCATTTTGTTTTAAGGTCCTGGGCACTGAAGGTTTTTGAAGTTTGCCTTTTTTATGTGTTGTCAAGATCAAAACACAGTAATGGAGGTATAACACCAGAGCAAGGGGAGCTATTACTCTCTCAGTGACCGTCATCTATGGGAGAAAATGGACAGCAGGTGGATATGGGGGAGGATGGACAGACACTGAACAGAGACAGTGTAAGGGTCTTACACTGAACAGGGCAGGGCTGAGAGGAAGACTGGTTTCATTCAGCCGGGAAAGGAGGGTGACAGCTGGAATGTACCTCCCGGGGCACAGCGCCAAAGGCTGCTCCAGCTGCTTACAGATTGTGGCCAAGGCAGTGTCCCCAAAGTGAACCAGAAGCGGGGAGGGCAAAGGAAGTGGCTCAGGTTGAGAACTGAATGCAAGACTCGAGTTCTGATCTGGACTCAGGGGCTATAATTCCGGATGAGCCCCTGACCTCCCCAAGCCTCAGTTTCTCTGCTTCTGAATTCAAAATGTGAACATTGTCCTTCTACCTGCTGGGTGGGTTAAAAGCAGTCTCCTTAATGAAAGGCAAGGTGACGCCCAGTATGTAATGGATGCTCCAGGGGTTTAAGTCCCGCTCCTGACTACATCATGCTGGACAGTTCTTCAAACTTTAATTGGTACCTGGTAATTGTGCATATTCATGGGGCACATAACCTGATACTTTAATATATATATATATATATATGTATATATATATATATATATATATATATATATATATATATAAAATGTGCAGCTATTAAATACAAGAAACTTACATTTCAATCCTATTAGCCACTGGTTATTTATTCTGGCCTTGAAGAGGCTCTTTCTCCCTTAATAAATTCTATTATATGTTGATAAGGGGACAATCGATGGCTCCATTTATAAAGAGCTTGCCTCACAAGCATGAGGACCAATTCTCCAGCACCCATGTAAAAATCAGGCATGATGGTGTGTGTGCTAGTGGAGATGGTGATGGGCAGAGACAAATGAATCCCTGGAGTTCATTAGTCAGCCAATCTAGCTGTTTCAGCAGCCTCCAGGCTCAGTGAGAGAGCCTCTCTCAAAAATGATGGTGGAGGGGACCAGAGGGATGGCTCAGTGGTTAAGAAAACTTACTGCTCTTTCAGAAGATCGGAGTTCAGTTCCCAGCACCCAGGATGTGACTCCTCCTCCAGGGGCTCCAAAGACCTCTTCTTGCCTCCCTCTCTGCTACATTCCTGTGGTGCACATAGCATCCCTACAGCAGGCCTCTATACACATAATTAAAAATAAAAACGAAAACATTTAAAGGTTACCTGAAAAATTAGGTGGAGAGCAACCGAGGAAGACATGTGACCACGCACACGTTCACACATCCCATGTCTATGTGTATCTGGATATACACATGCACCACACATAAACACACGATAAATGATAGATAATTAAATGAATGATTTAACTAGTTAAAGAATTAAATATAGGCAGGTGCTGTCGAACACTAAGGTTTATTCCTCCTTGGTATCCATTACAAGGGATCCTCCGTTCCCTCCCCACCTCTTCCCAGTCTGTCTTTCAGGCTGGTCAAGCCCAAAATTCTCTAAGGCCCAGTGCTTGCGGTGTCACATGCTCTACCACTGTGTGACATCCCCAGTATAGCATGGCCTTTCTGTAACTCACTTATCTCATCTGTAAATGAAGATGATACAGAACCGGCTAGGTGGGCTTCCTGGGAGGCTGGAAAGAAACAGTAGCAGGGGCTTCGTGGGGCTTTAAGCCGTGGTGGTGGTGTTAAGGCTGCCTCCCCTCACCGCTCTCCCTCCACCCCCACTGCAATGAAGGCATGAGTGCAGAGAAGCCACACTCACAGCCGAGCAAGGACCTTCTGGCTCCCAGCTCATTAGCTATGCGGACCACCCGCTTGCTGCCAATGAGAATCGGGGCTACACTGGGATACAAGCTCCAGGCTCTCAAATCACAAGCCCTGCCTCTTCCCAGGGAGGGAGCCCACGGGCCTGAGTAGAGGACAGCTCCCTCCTGCCTTGCTCTGGACACCTTTGCACCCTCCTGCATCAGGACAGAGCCTCATTATCTCCTTGTGACCTTGACCGCCTCAGCCAGTAGCGAAAATGTGTTGTCTTCCAGGCGAGGCCCCTTTGTGGCCGGCCACACAGGGATGGGGAGTATTCAGCCTCAAAGCTGGTCCCTCTAGAAAGGAGGGGGAAGGGAAAGGCCTGGCTCTTTCATTGGGAGGACTAGGAAAGCCAGCACCTCCAGTGACCAGTTAGCAGAAAGCAAAATCCGCCAGCAAATAAGCCATACGGAAATCCTAGGGTGCCCAATTAGCGTTGAATTTCAGATAAATGCAGAATCCAGTTTTAATATAAGCTGCTGTTCTTAAAGCTTTGCAGACCAAACATGCCGTACTTACTTAATGTATATTTAGTATTTCCATGAAATGTTATTTGTCTTTTAGGTGAAATGCAGGCCTTAAGTGGGCATCCTATATGTGTATTTTGTTAATTCGATTTCTTTAGTCAGGGGTGGGGACACCTAGGTATCAAATTATAAGTGCCAAGTTCTTTTCAGAGGCTGTTCCCTCCTTCCACTACGTGGGTCACGGGCATAGAACTCAGGTCATGGAACTTGGTGACGCGTGCCTTGATCCACTAAGGCATCTTGCCAGCCCACGTGTATTTTGTTTTGTTTGTTTTTTATGATAGGCTTTTGCTGTGCAGCCTAGGTTGGCCTGGAACTCATCCTCCTCCTGCCCCAGCTTCTCAAGTTCTAGGGTCACCAAGCATTCATTTCCATGCCCAGTTCTCTGGCTGGCAGCCCTACCTCGTTTTCTATAGTTGTAGAGCACATTGTCACATCTAAGTCGCTTTTACTCCACTTCTGTGCTTGGGGACACCCTCGTCAACAATTTCCCCAACAAGAAACCAAAGCAGCACCAGAGAGAGTGCTGGCATAGGGCTGAAGAGTTAGTGGTTTAGGTAACCTTGCACTCTGAGATGTATCACCTCAGGCCCTGAGAGGCGTGGGAAGGAACAGCATCTTTCTCCTCTAGTCCTGGGTGACATCAGGCTGCTTCCTCCTTCCAGTTCCAGGTTCTGTACCTACTCTGGTAGTTCACCAGGAGACACCAGACTCTTAGGTATCAAAGGGACAGTGGGCGGCCAGAGCATAGTGCCGACATCTCTTTCAACAGAAAGTACTCTGGACCTGGAAGCCAGGTAGACTCTGGAAATCACCCGGGTAACCAGCCAGGGTAAGAGAGAGGTGGGGTGTGTGTGTGTCAGGAGGAGACCAGATGACACCTTTGTCACAGAGGCTGTGCTCTTTTATTTATTCACTTATTTATTTTTAAAGATTTATTCATTATATACGAGTACACTGTCGCTGTCTTCAGACACACCAGAAGAGGGCATCGGATCCCATTACAGATGGTTGTGAGCCACCATGTAGTTGCTGGGAAATGGAAGAGCAGTCAGTGCTCTCAACCGCTGAGCCATTTCTGCAGCCCCAGAGGCTGTGCTCCTTAAGTCTTCCCTTGGTCATGGTGTCCTTCCCATCAGCCTGGGAGATAGACGGCATCATCTGAGAGCCACCCAGGAGCCTCCTGTGGATCTCTAGGTCCCCAGACCTCTTGAGCGAGCACCAGGGGAGAAGTCTATGAACTGTATTGCATAAATTCCATCTGGGGCTTTCCTGTGCACAGACACTTGAGAGCTGCTTCCGGGATAGCCTTGGCTCCCTGGCTGTGCCCCTTGCAGCTGGGTGATTGCTGTAGTTACAGTTATTGCTGTAATGAAACACCATGATCAAAAGCGAAGTGGGGAGGAAAGGGTTTATTTGGCTTAAACTTCATCATCTAAGGAAGCCAGGGCAGGAACCTAGAGGCAGGAGCTGACACAGAGATCATGGAGGGTGCAGCTTACTGGCTTGTTCCTCCTGGCTTGTTCAGCTGCTTTCTTATAGAAGAACCCAGGACCACCAGCCCAGGGATGGCACCACCCACAGTGGGCTGGACCCTCCCACATCAATCATGAATTAAGAAAATGCCCTACAGGCACGCCTGCAGTCTGATCTCATAGAGGCATTTTCTTTTTTTTTTTATTTTTTTATTTTTTTTTTAAATTTTTTTTAAATTTTTTTTTAAAGATTTATTTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAGACACACCAGAAGAGGGCATCGGATCTCTTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCATGACCTCTGGAAGAGCAGTCGGGGGCTCTTAACCACTGAGCCATCTCTCCAGCCCGAGGCATTTTCTTAATTGAGGATCCCTACACTCAGATGATTTTAAGCTTGTGTCAAGTTGACATAAAACTACACAGCACAGTGATATGACCTAAATTGCTGACAGTCTCTGGGCCCAAGACTTCTGAAATCAAGAGAGTCTAAGTATGAGACCCAGAAAGCTGTTTTCAAGTAAAAGTTTGTGGGTTAAAAAAAAAATGTTCATGGGCTGGAGAGATGGCTCAGCGGTTAAGAGCACTGACTGCTCTTCCAGAGGCCCTGAGTTCAAATCCCAGCAACCACATGGTGGCCAACAACCATCTGTAATGATATCTGATGCCCTCTTCTGGTGTGTCTGAGGACAGCGACAGTGTACCCACATACATGAAAGAAAGAAATAAATCTTTTTAAAAATATTCATATTTATATATTCTTTTCCTTTCTTTTCTTTTTAGTTCTTTTCTTTTAAGACAAGATCCACCATGTAACTCTGCCTCGCCTGGAACTTGCTCTGTAACTTGCTATGTAAACCAGGCTGGCCTTGAACTCACAGAGATCCACATGTCTCTGCCTCTTTGCACACCACTATGCCGGGCTGTGCAAATCTTCTCAGAGGGTGTGTGTGTGTGCAGTGTGTGGACATGTGCTAGGCAGCTTGAGATGTCATCACAGAAGGCCTGTTCCTAAGTGGTCCCTAGCCTTGTCCTGGAGCCATAGTGGAAGAGGTCGCTGGGATTGAGAGCTGGCAGGGCCAAGACTGTATGTCTGGCTTTGGAGGTGTGTAGAGCAGGTAACAGCCTACACCAGGCCTGAGAGATCAGATGTGGGGAAGGGTGCCAACGAGTCTCATCAGGGATGCTGGTTTGGTCAGGCCTCTTTTTGTGCCTTCCCTTTCTAGCCACGATCTTGGTGTCCTCCATAGTCACAGCCTTCAGTACCAGAGAGAAGGTACTTGACTCTGTTGTCCTATGACCTTGACATTTGGAGATGTAGGCTGCGTGGCTGGGAGGAGGGTATACGGCTGAACTAAGCAGAAGTGCCTTGCCTCTCTCTGCCTTCCTCCTAGAGTCGACACAACAGATCTGTAGGGAGTGTCCTGGCACTTGGGGGCCGGGAGCTCGAGTGGGCACCTCTGTGGGTTGAGTCCTTTCCTGATACAGTGCCATGGCAGACAGGGTGCTTATCCAGACTCCGTGTCATACATATCACTTAACCCTATTAACTCAGGGCCAGTGGGGGAGCCCATGCTGAGCCCCAGAAGCTGCCTCAATTTTCTGATGTTAGCAGGCTTGCCTCAGGCAGATGAATAGGGATTACTGTCATCCAGATTGGAGGGGAAAAAAGCTAAAGCTTGCCTGAAGTCACATGGTTACTTTCTCTCAGACTACTCCAAGGTGACTCTCTTTCTTTTTTCTAAAAATAAAATAAAGGCAGTTTTGTTTTCCTGATTATAAAAGTAATGAGCTTCAGTCATTAGACGGTTGGGAAGTAGATACGTGTTACTTGGCTGAAATAAAAGTTAAAGACAAACAAGCAAACAAAAGCAAGCAGCAATAACAAAAACCAAACCGAACCAAACAGAGGACAGAGAGATGGCTCAGCAGCCAAGGGCATTGGCTGTTCTTGCAGGGGATCCGGGTTCGGTTCCCAAGACCAACATGGTGGCTCACAACCATATGTGATTCCAGTTCCAGTGCATCTGATGCCTTCTTCAGATCCCCAAGTACATTGCACGTGAACCATGCACCATGCACTTGCATACATGTAGGCTTGTACACATATTTGAAAAAAAGACAACCACCACCACCACCACCACAGCAAAACAACAAGAATCCTTTTACTATTAAAGTTCTATGTTTAGAAAAAGTTTGTCTGGGTGTTGTGGTGCAGACCTTTAATCCCAGTGCTCAAGAGGCAGAGGCAGGCAGATCTCTGAGTTATCGTCCAGCCTGGTCTACAGAGTGAGTTCCAGAGCAGTTAGGGCTACACAGAGAAACCCTGTCTCAAAAAACAAACAAACGAACAAAAATAAACTATATATATATATATGTATATATATATATATGGCATATATATGGCATTGTAGTATATGCCTTTAATCCCAGAATTCAGGAGGGCACATTATACAGGTGGGCATATCTCTGTGACATAAAAGACAGCCTGGTCTACATGGTGAGTTCCAGGACAGCCAGAGCTCCATAGAGAGACCCCCCCCGTCTCAAAACAAAACAAGAAATAAATGAGTCACAAAATGGTAACTTCTATGTCGTCTAGTTTTATTTCAACCAGATACAAGGTAGAGTCATCTGAAACGGGGGAACCTCAGTTGAGAAAATGCTTCCATAAGGTCAGGCTCTAGGACATTTTCTTAAGTCGTTGCTAATGGGAAAGGACCTGGCCCATTGTGAGTGGTGCAACCCCTGGGCTGGGGGTCCTGGGTTCTATAAGAAAGCAGGCTGAGGAAGCCATGAGAAGCAAGCCAGTAAGCAGCCCCCCTCCGTGGCTTCTGCATCAGCTGCTTCCAGGTTCCTGCCTTGTTTGAGCTCCTGCCCTGTCTTCCTTCAGTGATAAACAGTGATGTGGCCGTGTAAGTCAGATTAACCCTTTCCTCTGGGGAGCTGCTTTGGTCATGGTGTCTCATCACCGCAGTAGTAGCCAGAACTAAGCCAACTACCATAGAGTTGGCTGTCCATCTATAGAGGACCGGAGTGATGAAATTCACAGAAAAGGAAGGAGAACGGGGGTTGCCAGGGGCCAGGGAGTGGACATTTAATGGGGGACAATTTCTATTTGAGAGGTATAGGAGCTCTGGCTGCGTGGTGCCAGGATGAGCCCTTGACCCGACGCCGTGCATATGCCCTTCTTTCTCTCCATGAAATCAGCTTATTATTTAAGCAGACGGAGTGTCTGCCAGCCGAGACAGGGAGGATAATTGGGAATTTTCCCCTGTGCGATGGTGGATATTTAATGAAAGTGGGAGTAGAAAACAAAGGTTAGCACTATAAGAAATTAGAGCCCGTGCTCTTTGGCACCGAGAGCAGGAGCGAGCCTCACGGCGCTCCTGGCATCCCTCCTTATGCAGTGTTCCTCTCTGGCACAAAACAGTTTCAGCTGAGGCCCTGGCACATACACCTTCTCCAGATGTTCAGAGTGATGAAGAGCAGGTATCTGGAAAGACACCAAACAGGGCGACAGAAGACTTGGGGTCCAGGCCAGGTTCTAGGTGACTGTCCTAGTTAGTTTTCTATTGCTGTGATGAACATCACGAAGCCAACTTGGGGGGAAAAGAGTTTATTTCATCGTAGGGAAGTAAGAGGAGAAACTTATCTCACAGGTTGCAGGCCATTGTGGAAGGAAGTCAGAGTAGTAACTCAAGCAGACACAGAAACCATAGGAGAAAGCTATAGCTTGCCCCCAGGCCCACTGGCATAGGGACAGTCCAGCCATAGTAGGCTGGGTCCTTTTTTTCTTTTATTGGATATTTTCTTTATTTGCATTTCAAATGTTTTCCCCCTTCCCGGTTTCCCCTCCAACAACCCCCTATCCTATCCCCACTTCTCCTGCTTCTATAAGGGTGCTCTCCCACCCACGCACCCACCCACTCACTCCCTCCCTCCCTCCTCCCCGCCCTGGCATTCCCTTACACTGGGGCATCAAGCCTTTACAGGACCCAGGGTTTCTCCTTCCATTAATGCCAGACAAGATCTTCCTCTGGTACATATGCGACTGGAGCCATGGGTCTGTCCATGTGTACTCTTTGGTTGGTGGTTTAGTCCCTCGGAGCTCTGGGTGGGTGGGTGGGGTCTGGTTGATTGATATTGTTGTTCTTCTTATGGGGTTGCAAAGCCTTTCAGCTCCTTCAGTCCTTTCTCTAACTCCTCCATTAGGGACCCCATTCTCAGTCCATTGGTTGGCTGCAAGCGTCTGCCTCTGTATTTGTTAGGCTCTTGCAGAGCCTCTCAGATGACAGCTATATCAGGCTCCTGTCAGCACGCACTTCTTGGCATCTGCAACAGTGTCTCTGGGTTTGGTCTGGATATGGGATGGATCCCCCAGGTGGGGCAGTCTCTGGATGGCCTTTCCTTCAGTCTCTGCTCCACATTTTGTCTCCGTATTTCCTCCTGTGAGTATTTTGTTCTTCCTTCTAAGAAGAACTGAAGCATCCACACTTTGGTCTTCCTCTTTCTTGAGCTTCATGTGGTCTGTGAATTATATTTTGGGTATTTTGAGCTTTTGGGCTAATATCCACTTATCAGTGAGTGCATACTGTATGTGTTCTTTTGTGACTGGGTTACCTCACTCAGGATGATATTTTCTAGTTCCATCCATTTGCCTAAGAATTTCATGAAGTCATTGTTTGGATCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAAAGATATGTTTATATATTATGTATACAGCATTCTGCCTGCATGTATGCCTGAAAGCCAGAAGAGGGCACCAGATCTCATTATAGATGGTCATCCATGAGCCACTATGTAGTTGCTGGGAATTGAAGTCAGGACCTCTGGAAGGGCAGTCAGTGTGCTTAATCTCTGAGTCAGTTGTTACGTCCCCAGGCTGGGTCTTTTTACATCAATTAGCAATCAAGAAAATGCTCCTACACATAAGTCCGCACTGACCAATCTGATGGAGGCCACTCTTCAATTGCAATCTTGCCCTCGAGATTAGTACTCATAGTGACCTTAGGCAAGTTGACTCCCCTTCACTTCTCATCTCTGCTATGAGGGGGAGCTGAGCTGCTATCAGGAGAAGGAGGGAAGTTTGGGCATTGAATGTGTCTTCTCACACCTCTAACCTTTCACTGTGCGATCGTGAGAGCAGACAGGGCGTGAAAGGCCTCAAAGTGCTAATTTTTTTTTGGACTCAAACGTTTCGGGGGTAAAGGCAAGGAAGGGTTTTATTGGCACAGGGCGTGCTCCCTTTTGCCCAGCGAGAGGCAAGAAGAGGAAGCAGGATTGTTTGTTGGGTGGCTTTGTGAGAGGCAGGCTGTAGCTCCCCTCCTCCAAGGTGTGGGAGGAGCTCCTGAGATCTGGATCTGGATCTGTGAGCCTAGTAGGTTGGGTTGGCTGTACCACACCCCTTCCCCAAGCCTACCCTGTCACTAAGACCTCTGACACTTCTGGAAGACTGACAAAAGCCACATGACAGGTCTTGGTCCCCGGTTGCGCATTGGAGAATGCAGCTCAACTGGTGACCACAGACGTACAAAATCTATTAGTGACATTCTTTTCTATGGCCTGTCAGGTTGATGATGACGAGTAGGTGACCAGCCAGAGCTGGAGAGATGGCTCAATTCTTAAGGACAATTGTTGCCAATTTGGATGACCTGGGTTTGATCCCTGGGACCTACGTGGTGGAAGAGAACGGATTTCTGCCTGCTGTCCTCTGACCTCTGCAAGTGCACTGTGGCACATGCCCTTGACCCAAAAATAAAAAAATAAAATGTAATAAAATTTTCAGTGAGAGAGAAAACAATCCTGGAAACATCTGGGAAATGAGTGAGGAGACCATGACTTCTCTACCATAAAGTACCCTGCAGCCATTAAATGTGTATTTTTGAGTGTTTTCACGTGGTGGTATATATGCGTGTGTGTTATATACTCATGGTGCATGAGGCATTGTGAAAAAGTACATTCGGAGGCCAGGGTACACCTGATGCCATGGTCTACCTATTTCCTTTAGACAGGGTCCCTCGCAGAACCTAGGGATAGGCTGGCAGCCATAGAGTCCCAGCCATTCACATTACAGGTGTGCATGTGGCTATGCCTGCCTAAAAAAGTTGGTGCTGGGATGACAGGTACATTAACAACCTCACCCAACTTTAACACACACACACACACACACACACACACCACACCACACACACATACACACACCACACACACATACACACACCACACAATATACACCACCACCACAATACAAACACATAACACAAACACACACAACACAACAACATAACACACTATACACACACACAATAACACACATACACACACACCACAAACAATATACACACACACACCACCACAACACATACACACCACACACACTACACACCACAACATACAACACCAAACACATCAAACACCACACACCATACACACACAAACCACACAAACATAACAACCACCAAACATACAAACACCAAACACACATCACACACCCAACCACATACACACATAAACATCACACAACACATACACACACCACACACACATAACACACAAACCACACACATATATTCTAGAGAGTGCAACTTTGGTAGTCATGCTTTCTCAGCAAGCTCATTTTAACCATTTAAAATCTTACTTTCCAAAGTATACTTTATTCCACAGTACCAAGACTCATGCGTCTGAAGTAGGAGGATGTCTTGACCTCAGGAGTTTGATACCAGCTTGGGAAACACAGTGAAACAAATTCATAAAGGTGGTATGTTATATTTGGCGAATGGAAAGATACTCCCCATGGGGTCATCAGACACGTGCTGGGGTTATTTCTATCAGACAGATTTCCTTTAGGAGATTTCCTAGGTCCACTTAGGAGAGGACCTAGGAAGGTCTAAACTGTTGTGCAAACCGTATTTGTAAGTTTTTCCATCTGCCTTCCGTTTGTTTACTGCTGATGTCTCCGTGCATATGCAGGATTTGCCCAGTAAGCAGAATTAGGAGAGCAGGAACCTATCTTTAACAACAGAGGTGCTTAGGAGAGCCAATCGCACCGAGGAGCTCTCTTGAGGCCAGAGCTGGACAGAGGCCCCCTGAGAGATCTGAACCCAGCCTGTTCCTTGGCGAGGGACCGGGCCAGGCTCGAGAGATTAATCTCGATCCACCATCTGCTGTGTCACTGTCTATTTCTAGGATGGCAGTTTGTCACCCTCGCCACTCAGGTGTCAGCTGTGGGGAGAAGTCACCATTCAGGGGATGGAGACTTGGGGGGTGCAGGCGGGAGGAAGACCCCCAGCCACTCACAGGAGTGAGGTACCCATCCCAAGAGAGAGGCTGGGCCAGAACGAGGTTGAGCTGACTGGTGTGATGAATGGATAGAAGGGAGAGCCACTGGAAAGCAGGGAGACACTTAAGCTGTCCACTGGGAAGTTACCCCAAAGGGAGGTGATCTGCTCGGACACCTTTTCTATAGTCCTCCAGAATGCATAAGCAAGCCTCCAAGCTGTCGGGTTTGCAGGAAGTCTGGGCAGCCAGAGATAATGTGTGGTTGTGAGGTAGTAGCTGTGAGGACAGGGAGTAACTCACCTGCGATTTCCACTTTTCACAGTCCATCCCAGGGCCACTGAGCGCAGGCAAGAGAACCCAAGCCTGGCTGAATAAACAGGAAGGTTCTCAATGGAAGGATGTCAGCTGATCCTCGGAGCTGAAGAAGCAGTCTCAGAAAAGGACAGGGATGCAGCTCAGCTGGTAGCATTCTCCCACGGCACGCAGGAAGTCCTGGGTGCCGACTCTGGCACTGAAAACTGGGTGTGGTTGACACAGGCCATATAGGTTGAGGCAGGGGGATTGCCTGTTGGAAGCCAACTTTGGCTACACAGTGAAGCTCTTTCTCAAAACAAAACAAAACAAAACCCTCAAACAAACAATAATCTGGAAGGGGAGATGGTTTTGGGGTTTGGGGGAGCAGAACCCCACTGGGAAGGGCAGCAGAAGGGTTGCTGGACTAAGTGGGCTCCACTTTTTTTTGGAAGTATTAAACTTTAGTGTTGTTTTTGCTGGCACAGAGAGCTACTAACCCCATTGTGGTCCTTCCCTGGTGGCTGGGGAAGGAGTGGCTGTGTGTGCTCATGTGTGAGTGCGTGCATGTGTGCGCGCGTTCATGCCTGCGTGCATGTGTTTAAGTCTAAGTCTAAGGATGACCTTGGCTTTCACTTCGTAGATTTGTAGATGACATCTGTCCTAGTTTGGTTTCTCTTGCTATGATAAAACCCTGACTAAAACCAATTTGGGGAAGAAAAGCTTTCTTTGGCTGACAGATTACAGACTGTCATCAGAAAAAGCCAAGGCAGGGACTGAAGCCAGATTTCAGAGGACACTGCTTGCTGGCTTGCTCAGCCTGCTTCCTTACACAACCCAGGACCACCTGCCCAGAGGTAGCACCAATCCAGAGTGGGCTGGGGCCTCCCACATCAATCACCAATCAAGAAAATGTTCCACAGACGCACCTCAGGTCAATTTGATGGAGGTGATCCCTCAGCTGACATTCCTTTCTCCCAGGTGATTGCAGTCTGTGTCAAGTTGACAGAAACCAACCACCAACCAGCAACACCGTCCATCCTGTCTTCTGAGACAGAATCTCTCACCAGCCTGGGACTCCCCAAGTGGGGCTGGGGTTGCAAGCACATAGCATGATGCATGGCTTTTAAAAAGTGAACGTTGGGTATTGGAATGAGGTCCTCATGTCTGCTATCTCCTCAGCTGGCAAGCAGTTTTAAGGAGTTGTGCTAAAGCACACTGTCTTAGTTAGGGTTTCACTGCTGTGAACAGACGCCATGACCAAGGCAACTCTTGTAAGGACAACATTTAATTGGGGCTGGCTTACAGATTCAGAGGTTCAGTCCATTATCATCAAGGCAGGAGCATGGCGGCATCCAGGCAGGCATGGTGCAGGAGGAGCTGAGAGTTCTACATCTTCATCTGAAGGCAGCTAAGTCCCAGGCATCTAGGACATGGGCTTTAAGCCCATGCCCACAGTGACACATCTGCTACAACAAGGCCACACCTCCTAAAAATGCCACTCCCTGGGCTGAGCATTTACAAACCATCACACACATTCAGTGGTAACAGGCGATTGCCCTCAAAGAAACCTGGAGAAATTGAGAAACCTGGCAGAGGGTGGGGGTGGCACCAATGAGAAGCGGGGGGGTGGGGGGGGATGGTTATATAGATGCTACCTGTAGAGGGCTGGATTGTGAGCCCCAAAGGATACAGAGCCAGACTGCTGTCATGGTGACCTTACTTAGAAAGACTCTTTGCAGCTGTGATTAGCTTTAAGAATCTAGAGATGAGACCATCCTTATTGGGGTCAGGGAGCCGGGCGCGGCTGGGGCTGGGAGCTGGAGGACTGCTTCACTCCAGTGACAATTGTCCTTGTGGGAGAGAGGCTGAGAGATATCTGAGTGACAGAGACATAGAACAGAAGATCCTGGGAAGATAGGCTAGAGAAGGAAGTGAGGCAGGCACAAGTCAAGGAATATTAAAGTTGGAAGAGAAAGGCAACCTCTCCCCTAGTCTCCCCTTGTGTCTTCAGAGGTAGCCCTGATTTTGACCTCCACATCTTGTGTGTGCATGCGTGCGTGTTGGGGTAAGGTCTTATATTTTGTAGCTCAGGTTGGCCTCAATCCCTTAGTCTCCTGCCTCACCTCATCCTCCAGAGTACTGTGCTGTGATTACAGGCATGTGCTATGATGCTCGCCATGATGCGGAGTGCCCCACTGTGTTCTAGATGGAAGTTTGTGGTTTGTCGTGTGTCTTGGGGATTGGAAGCAAGGCCGTGTGCATGCCAGGCAGGGAGAGTTCTGCTTCTGAGCTATACCCCCAGCCTTTTTTTTTAAATTCCTTTCTGTGACCTGGTTTCTCTGTGTAGCTCAGGCTAGCCTCTTAACTTTTGATTCTCTTGCCACAGGTTCCTGAGTACCCTGGGATTACAGATATGAGGCACCATAACCAAATACCATCAGTTTGGGTAACCCAGTCTGTGGGCAGCTATAGTGAGGTAATGCAGGTCCCTGCCCTGTGGAGTTGTCAGTATCTTGGGGTACAGGAGCCAGAGTCCTTCCCACCACCATTGTCACTCTAGCTAACTGAAGAAGTTCTCCCAGGCTTTTTAGGGGTTCCCAGTCATGCAAAACCAGGATTTCTGTTTCAACACAGAAAGGAATTTCAGAGCTGGCCAGTGTATAAAGCTGAATTTATTAAAGATATATTTTAATATAGATTTAAATGTGAGGGTTAGAAGAGAAAGGGGCTCTCAGGAGGACAGACAGACACAGCTGAGAACACATGTACTCAAAGAGTCCTGGAAAATATACCCAAGAATGTATGGGCTTCACAAAGTAGAGAGGCCTGGTTATATGACCTGGTTAGGTGTCTGTCAACTTAACACAGGCTAGAACTATCTGGGAAAAGAGAAACCCCAATCTAGAAAATGCTTCCGGGGGTTGGGGATTTAGCTCAGTGGTAGAGCACTTGCCTATCAAGCGCAAGGCCCTGGGTTCGGTCCTCAGCTCTGAAAAAAAAAAAAAAAAGAAAGAAAGAAAGAAAAAGAGAAAATGCTTCTGTCAGATCAGCCTGTGGGCTTGTCTTTGGAGGCATTTCCTTAGTTGATGATTGGTACAGGAGGGCCCAGACTTCTGTGGGCAGTGCCACCCCTGGGCTGGTGTCCTAGGCTGCATGAGAAAGCAGACTGAGAGAGCCACAGGGAGCAAACCGGTAAGCAGCACCCCTCCATGATGTCTGGTTCAGATCTTGCCTTCTTGTTCCTGCCTTGTGTCCCTGTCATGGCTTCTCTGATGATGGACTGTAATCTTTTTTTTTTTTTTTCTTTTTTTCGGAGCTGGGTACCGAACCCAGGGCCTTGCGCTTGCTAGGCAAGCGCTCTACCACTGAGCTAAATCCCCAACCCCGATGGACTGTAATCTAAAAGCAAAACGAAACTCCCTCCACAGTTGCTTTTGCCTAGTGTTTTATTACAGCAATAGAGACCATTGTCGGTGGGGTTGGAGGGATGGTTTAGTGGTCGAGAGCACTGGCTGCCCTTGCAGAGGACCTAGGTCTAGTTCCCGGCACCTATGTTAGCCCACAACCACCGTAGCTCCAGTTCTAAGAGATCTGATGCCCTCCTCTGGTCTTCATGGGCATTGCATGTTCATGGTACACAGATATACATGCAGGCAAAACACATAAAATTAAAAAAAAACAAGACATGTGTGTGTGTGTGTAAATGACTAAATGCAAATACATAATATACATATGGAAAATTATTGGGGATGGGGATTTAGCTCAGTGGTAGGGCGCTTGTTAGGAAGCGCAAGGCCCTGGGTTCCGTCCCCAGCTCCGAAAAAAAGAACCAAAAAAAAAAAAAAAATTAAAAAAAAAGAAAATTATCAAACTATCAAGCAAACGACAGCAATTAAACCCAAACAAAAGCCGTTCCAGATTGAGAAACTCAGTCTCTGGCAAGATACTGCTATAGAGAGAAGGGAACCCTGAAGTCACAGACCCCAGCACTGAAGCCCTGCACCAGTCATGGGTACTGTTGCAGATGGCTCCAAGGACAGGTCTCCACCCTCTTCTGCCTGGCCCATCTGATTGTGTCCAGCCCCTCTTATTTGTCTGCCCTCTGTGAGCTCGGGAGAGCCGTTAAGTCCTGATGTCTTATCACAACTGCTTGCGCATGCCCAGCCTCCAGCCTGGTGGGTTGCGCGGCGATTTCCCAAATAAGCCCTTTTCTTCTGGCCACAGAGAAATGTGAAATGACATTTTCTAAAAACGTCGCTTTGTAAAAATGCCAAGGCTAATCTCTAGGCACAAAGAGTATTGTGGAAATCGGAATTGACTCGGGGAGCTGCAGCGCACGCACGTTGTGGGTGTGCATGGCTGTGGACGGAGCTGAGACAGGCTATGCGAGCCTGAGGGCTGCGTGCCGCCTGCGGCTGTTAGAACCCTGCCCAGGCTCAGGCTCAGGCTGGACTCTTTTTTTCTTGTTTTTAGGGCATTTGGCTAGAGGCTAGCGTAGCTATCAAGAAGAGGCAGACTAACTGATTTCAGCGCTGAAGAAAGAGATGTCTGTTTCAGAGTTCCACTAGGGAAATCTTAGAAGTTCTCTGACGGGCCCAAAGGCTTTTCAAATACTCAGACTGTTTGATTTGGAGTTTGATTTTTTTTTAAAGTATGCATGATTTTTAATTTTCGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGGCCAGAAGTGGGCATCAGATACCCTGGAGCTGGAATTATAGGTAGTTGTGAGCCATGGATACTGGGACCCTAACTTGGGACTGTGGAAAAGCACTTGTAAGCACTGAGCTACACTATTAATAACACTCTGTTATGCTGGTGGACAAGAGCCTAGCGTAACTGTCCTCTTAGAGTCTCCACCCAGCAGCTGATGGAAACAGATGCAGAGACCCACAGCCAAGCATCAGATGGAGCTTGGGGAGTCTTGTGGAAGAGTTGGGGGAAGGATTGAGGCACCTGAAGGGGACAGGAACTCCCTAGGAAGACCAACAGAGTCAACTGGCCTGGACTCTTGGGGGCTCCCAGAGACTAAACCACCAACCAAAGAGCATACATGGGCTGGACTTACCTCCCCACCCCACACATATGTAGCAAATGTGCAGCTTGGTCTTCACATGGGTTCCCAACAACGAGCAGGAACTGTCCTTGACTCTGTTGCCTGCCTGTGGTTCCTGTTCCCCTTGAAACAGTCTTCCCAGGCTGCTTGTCTGCCTGTCTGGCTCCGGTGGGAGAGGATGTGCTTGGTCCTGCAATGATTTGATGTGCTAGGCTTGGAAGCCAGTGGGGACCTCTCCCTTTCCAGAGGATAAGGGGATAGACACACATACAGACCACACGCACAGATACATATATACAAACATGCACATAAAAACACTCATGGACTGGAGAGACAGCGGTCAAGAACACTGACCATGTTCTTTCAGAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTGACTCACAACCATCTGTAATGCAATCTGATGCCCTCTTCTGGTGTGTCTGAAGACAGCTACAGTGTACTCATACAATAAAATAAATCTGTAAAAAAGAAAGACATCATGCACACACACATAGACACACATATAGACACACATGCACACATACAAACACACATAGACATACATACAGACACTCATGCACACACATACACAGACCTATACATACAGACACATGCATACACACACATGGACATACATACAGACACACATGCACACACAGAGAGACACACACACAGACACACATGTGCACACACACTGAATAGGAGCAGTAGGATGAACAGAATCAATGTACAGTACATGCCTATATAGGAATAGGAAGTCAATTCTGTTAATTTATCCATTTAATGTGAATAAGTCTAAGGAAGGCTGGTGAACACAGGATTTTAATCCCGGAACCTGGGAAGCAGAGACTGGCAGATCTCTGTGATTTTGAAGCCAGCCTGATCTACATAGTGAGTTTTGGGACTTCCAGGGCTACCCTGACTCAAAAAATATATTTGTACATGGAAAATCAAAGTCAAGTACAAATCAAAGAGTTCTGGTTGTCTAAATTTTTGAGTCTATAAAGTAGCTACATTGATTTAGGGAGAGGTCAGAGTTGCTAGGCAACTGTTCTCTTGGGAGAAATACATGCTGTGGACGTATGAGGGATGGACCAGGACTGAAGGAGGGAGGAAGCTCAAATATTCTTTTTCCAGTTTTGCTTCTGAGCTGGAGGAGATGAGACACACTGGTAAGAACCCCAAGTGTGGTTTGGGGGTGCTGGGCAGTGAGTGAGAATGTTCTTTGCTGGGCACAAGGGAACTCATTAAGAAGGTTGGAAGCAAACATCCTTACTCTCAGATGATGTTGGGAAAGGGTTGTGGGTGAGCTCTTGGCAGCTTGAAACACAGACACATAGAACAAGAGAGGCTTTCCTGAGTATTTGAGGGCACCAAAGGTAAGCAAGGGTTGATGGTTGCTAAGCTTCCTGTCAAAATAGTGTCTTCCATTTTCTCCCTGGAAAAAGCGCGCCTTATAAACCTCTCCATAGATATCAGGAAGTCTTGAACCTGGGCTTTTGAGCCTAGATGCGAACCTCGGATGTTACCGAAGCAAGTGTTGTGAGAACTCCTTCCTTGAGGTACTTCTGAGCAGTCATGGGCTGCAGCCTAACCCTCTCTCATTCCATCCATCTCTCCCCAG
Seq C2 exon
GCCTCGATGCCATCCAGTGCTCACTGCCCATGGAGGAGCGGAGGGTGGCCCTGAGGGAGCTGTCCGAAGCCAGTTTCAGCGAGTGTAAGTTCAGCCTGTCTCTCACAGACCTATTCATCATCATCTTCTCTGGGGTGGCTGTCTCCGTTGCTGCCATCATCTCCAGCTTCTTCCTGGCCACTGTGGTGCAGTGTTTCCAGAGGTGCGCCCCTAACAAGGACACGGAGGATGAGGATGATGACGAAGATGACTGAGCCTCCTCCTCCTCCTCCTCTTTGCTTTCCCACACTCAACCAGTGGCGCCTCTCCAAGGGAGACTGATGCTGAAGACAGATGCATCACATCACTCCAAGCAGAAAACGGGATGGAGCTTGCCTAGATGCACCTGCTGGGACAGCCATTCCCAGAGCATAGAATCAGCAGAGTAGAGACGCAGGAAGGATGGAGAGATTCACTCTTAGGCAGAGCCTGCCTCCCAGGCTGGGGGTGGGGGGGGACTCCTGTGTGTGAAGATAATCAAGTCAGGCTTCATGGCTTACAGCTTTACAACCCTCCCGTGCCGAAGAGAGATCTCACAGCTTCTGACCTCAGAGGTGTTTGTGCCGTTCTTATTACAAGCTGCACTATGGACCACGAACCATCTTCCCCCTAAAAAGACAGTAGTGTTCTCAGTGTAGATTCAAGTCAAGCTCATTCTCCGTGGGAACAGGAATCCTTTTCTTCTATAGAAGATCCCTAGCGGCCTTGGGCTGTTAGACCAAGAACAAACAAATGTATTTGCAATAGACAACGTCTGTCTCCCCTGTGTGGCTGTGTTGATACCTCACACCCAACGTGTTGAACGTCGCTTGATGGGAAATGACCTGAGCCAGCAGCACCAAGCTGGTGGGCTGGGGGCTGAGACCTGAGGCGGAAGCTCACAAGAAGTCCCTGGGGGCGTTTCAAGGTCCCACTCCTTCAGGGTGTTTTGAAGAGGTCCCTTTGGCTATGATTGGGTCATGAGAATGGAGTCATCCTCAGTGCATTTAGCGCCCTTATAATTCAGACTTTGGAAACCTCCCTGCCCCTTCTACAGGGTGAGGACCCAGTGAGCAGGTCTATGAACCAGGAAGGGGGTCTCTCACAGGAATTCAACCATACTGATGGCCCGGCCTCCACCTTCAAGCCTCCCAAACTGAGAGGAATAAATGTTATTTATAAACCCTCGTGTCTGTAATTTTTTTTGGGAGGGAGAGGAATAACAGCTCAAGGATACTAGGACACCATCCCATCTTTAGCTGAAATGTTGCCAAAAAGTAAAAGCTTAGACCTTGT
VastDB Features
Vast-tools module Information
Secondary ID
ENSRNOG00000015264:ENSRNOT00000020483:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.005 A=NA C2=0.131
Domain overlap (PFAM):
C1:
PF0146213=LRRNT=WD(100=13.5),PF138551=LRR_8=WD(100=27.9),PF138551=LRR_8=WD(100=27.9)
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]