MmuINT0092992 @ mm10
Intron Retention
Gene
ENSMUSG00000028584 | Lrrc38
Description
leucine rich repeat containing 38 [Source:MGI Symbol;Acc:MGI:2442845]
Coordinates
chr4:143349757-143371032:+
Coord C1 exon
chr4:143349757-143350811
Coord A exon
chr4:143350812-143369763
Coord C2 exon
chr4:143369764-143371032
Length
18952 bp
Sequences
Splice sites
5' ss Seq
AAGGTGAGC
5' ss Score
9.6
3' ss Seq
TTCCACCCATCTCTCCTCAGGCC
3' ss Score
10.65
Exon sequences
Seq C1 exon
GGCGCTCTGGGCGCATGCCCCAGACACGCCCCATGGAAATCGCTCCAGGGATCCGTCACTGAACTTAGTCTTGAGCACCGCTGGCCAGGTCTGTGCGACAGGTCCCACTTCCCCGCCCGAGTGGGGTCGCTCTGGGCTCCCTCCACGATCTCCACCTGTGCTTTTGAATGTTCCAGAGGGTCAGTTTCCTGTGCGGGTAAATTCTGCGCCCAGCACCTCTCATCTTCCTCCTCCCTCCCCGCCTCCCGGACACCCCGGGTCGCTCTGTCCCCGCCGCACTCTCATCGCCCCCGCGCGCCCCGGCGCAGCCTCCCCGCCCTGCGCCGCTGCCCTGGGGCTCTCGGCGCCCCGGAGCCAGGGCCCCGCTGCGTCCTCCTTGCTGCGAGCTGAGTCCTCCGGAGTCCCCCGGGCCATGAGTCTCTGCGTTGCCCCCCGCCACCCCACGGGCGCTGCTGCGGCGCTGGGGCTCGGTAGCCTCTTGGTGCTGCTCGGGCCGGGACGCGCGTGCCCCGCGGGCTGTGCTTGCACCGACCCCCATACCGTGGACTGTCGCGATCGCGGGCTGCCCAGCGTGCCCGATCCCTTCCCCCTGGACGTGCGCAAGCTGCTAGTGGCCGGCAACCGCATCCAGCAGATCCCCGAGGACTTCTTCATCTTCCATGGAGATCTGGTGTATCTGGATTTCAGGAACAACTCGCTGCGCTCGCTGGAGGAGGGCACGTTCAGCGGCTCGGGCAAGCTGGCCTTTCTGGACCTGAGCTACAACAACCTCACCCAGCTGGGGGCCGGCGCCTTCCGCTCGGCGGGGAGGCTGGTCAAGCTGAGCCTGGCCAACAACCATCTGGCCGGTGTACATGAGGCTGCCTTCGAGAGCCTGGAGTCCTTGCAGGTGCTGGAACTCAACGACAACAACCTGCGCAGCCTCAACGTGGCGGCTTTGGATGCGCTGCCGGCACTGCGCACTGTGCGCCTGGACGGGAACCCCTGGCTGTGTGACTGTGACTTCGCTCACCTCTTCTCCTGGATTCAGGAGAACACATCCAAATTGCCCAAAG
Seq A exon
GTGAGCCAGAGGGTGGCTGGAAGCCAAGGCTGGGTCTGGTAGGGAACGCTGGAGGAATCCAGCACGGTCAGGATGTGTGAGGCCTCGTTTTGGGGCTCACCAGAAAGTCCCCTGAACGAGGACCCCTGTGGTGTAACTCCATAAGACCAGCTGTCTGAAAGTCTGAGATGTGTTGGCAACGAGTGTTAAAAGAACACACCCGGAACTCTCTCAAGTTTCTCTTTCTTCACTTATTACCCACCTTTTCTCCATCATCATGGTCCACATCCTCTCTGGGAGCTTTTAGGTCCCAGGACAGGTGGGTGTGAGCAATGTACTGGTCCCTCCTAGTAGGAAACCCCTCGTTGTGTGGGACACTATACCATTTCCAGACCCCAGAGGTGAGAGGAGCTGGCCAGTTCTGAACGGGATCTAGCTGCCACAGATTCCAACCGGGTCCCTCTGTTCCCATCTCTCTTTGACTTTTTGGTCCACCCTTGGTGAGAAAAATTGCCGGTGAGGACAAAGGCAGCCAGCCTAGTGTGGAAATGTGGGATTGAAACCTTCCGGGTGGGCACCTCCCCTGTTTTCCTGTTGCCCCTCCTGATGACCCATACACATACCCAATTGGCTGATGGGAACACAAGGGCACTGGGAACGCAGTACCAAGGAAGTAAAGGCAAAACTGAGAACGCTAACACTCATGGGGTGCGTGCTAGGACTGAAGGCAGGTGAAGTCCTTACCTTCCGTGGAGCCCACATGTCTACTCGTGAGACTGTGAGCACTGGCCTAAATTGACCTCTCAGAAAAAGCCCTTAAAGCTTTGGTGAAATTGGTTGCAGTCCAGTATAGCACACATTATAAAAGGTGGCATAGCTAATAACTTTTCGTTATTCCTGCCATCGAGAGCTGAGCAACACTGTTCCTCTGTGTATGGAATTCCTGTGTCCACCTGTTAGTTCTGCGGGGTCACAGGCGCACACCCTGAGCCCTGCTGTCATTCCGGAGTGGGCTCTTTCCCTAATGGCTCTACTATGTAACAGTTCCTAAAAGATTTGGTTTGCAAGGTGCAGAACCTCCCAGGTTTGAAGATGCCCTTGCTCTCCTGCCTGCCTCCCCAGATCTGCCAGGAGATTCTGAGTGACAGAAATGTCTTATGAAAGCCCTCACTGGAGAGCAGGTCACCTTGTCTTTATTGCCCCTGTCTTAGTGGACTGCTTCTCACTTACCTGACTGTGTATCCAGTTTTCCAGTTGAGGGCAGGAGCTTGGGTTCTGTTTTCAGTGCTGTTTTAGGTAACTGGGCCCTTAATGCTTCTGTACCTTGGCTCCTTGTCTCTTGAGTACTTGGGTTGACCTCTAACGCCTCCACAGAGCCTTAGGTCAGAGTTGGAAGTCCTGGGTTTGCATTTTGCTTTAAAGTCCTGGGCATTTAAGGTTTTTGAAGTTTTCCTTTTTTATGTGTTTTCAAGATCAAAACACAGTCATGGAGGTCTAACCCCAGAGCAAGGGGAGTTATTACTCTCCCAGCGACCATCATCCATGGGAGAAAATGGACAGCAGGTGGACATAGGAGACTAGGGAGGATGGCGAGACAGTGAATAGAGACAGTGAAAGGGTCTTGATAATAGGGCAAGGCTGAGAGGAAGACTGGTTTCATCCAGCTGGGAAAGGAAGGTGACAGCTGGAAGGTACTTCCTGGGGCACAGAGCCAAAGGCAGCTCCAGTCTTGATCCAGTTGCTTACAAAGTGTAGCCAGGAGAATGTCCCCAAAGTGAACCAGAAGCAGGGAGGGTGAAGGGACTGGCTCTGGCGGAGAACTGAATGTAAGACTCCAGTTCTGATCTGGACTCAGGCTTATAATTCTGGATAAGCCTCTGACATCTCCAAACCTCAGTTTCCCCGCTTCTGAATTAAAAATGTGGACCTTGTCCTACCACCTGCTGGGAGGGTTAAAAGCAATCTCTCTGATGAAAGGCAAGATGAAGCCCAGGATGCACTGGATGCTCTGGGGGCATTAATCCCCACCCCCTCCTGCATCACACTTGACAGTTCTTCAAGCTTTAATTGGTACATGGTAATTGTGCACATTAACGGGGCACATAACCTGATAATTATATATATATATGATGTGTAGCTACACATTAAATAAGAGGAATTTACACTTTGTATCCTATTAACCATTGATTATTTCCTTGTTCTGGCCTCTCTGAGGCTCTTCCTGGCCTTAATAAATTATATGTATGTTGATATGGGGACTAGAGATGGCTCAGTTTATAAAGAGTCTGCTTGCCACACAAGCATGAGGACCAAGCCCCAAGCATCCTCGTAAAAACCAGGCATGATGGTGTGTGTCTGCAATCTCGGTGCTAGTGTGGTCTGGGTGGAGTCAAATGAATCCCAGGAGCTCACTGGCCACCCAATCTAGCTGTTTTAGGGACCTCCAGGCTCAGTGAGAGACCCTTTCTCAAAAGAGATGGTGCAGGGGACTAGAGAGCTGGCTCAGTGGTTAAGAGAACTTACTGGTCTTGCAGAAGGTCAGAGTTCAGTTCCCAGCCCCCAGGACTCAACTCCTCCTCCAGGGGCTCCAAAGACCTCTTCTTGCCTCCCTGTCTACTACATTCCTGTGGTGCACATAGCATCCCCACAGCAGGCCCCTATACACATAACTAAAAATAAGAACAAAAGAAAATTTAAAGGTTACTTGAAAGATTAGGCAGAGAGCAACTGAGGAAGACAGGTGACCTCTGACCTCCGTCCACATGCACACTCACAGATGTCTATGTGCGTCTGGCTATACATATGCACCACACATAAACACACAATTGATAAGTAAATAATATAAACCACAGCCACTGGTATATTAATTAAGTGAATGAATGATTAGTTAAATAATTGAATATAGGCAGGTGCTGTAGAACACTAAGGTTTATTCCTTCTTGGTATCCATTACAACGATTCCCTACATCAACCCCCCCCCCCCCGCCCTCAGTCTGTCTTTCATGAAGGTCAAGGTCAAAAATCTTGAAGGCCCAGCTTGGCCACTGAAGTATGCTTGCTTGTTTGTGTGTTTGCCACATGCTCTACCACTGTGTGACATCCCCAGTCTTGCATGGCCTTTCTGTAACTCACTCACAATGAAGATGGTACAGTACCCAATAGGTGGGCTTCCTGGGAGGCTGGGAGGAAACAGCAGGGGCTTCGGGACTTTAAGTGATTTTAAGACTGCCCCTCCCCACCGCCCCCCTGCATTGAAGGCATGTGTGCAGAGAAGCCACACTCACTGCTAAGCAAGGCTGGGTGGAGCCAGGCTGGATGGATCTTCTGGCTTCCAACTCCGTAGCTATGTGGACCACCCACTTGCTGCCCATGAAAATCAGGCTGCTCTGGGATACAAGCTCCAGGCTCTCTAAGCACAATCCCTGCCTCTTCCTGGGGAGGGAGCAGCCAGGCCTGAGTAGAGGACAGCTCCCTCCTGCTTGCTGTCTGCACCTTTGCACTCTCCTCCATCAGCCAGAGCAGAGCTATCTCCCTGTGACCTTGACTGCCTCAGCCAGTAGCAAAAATGTGTTGTCTGCCAGGTGAGCCCCCAACACAGGGATGGGGGGTATTCAGCCTCAAAGCTAGTACCCTAGAAAGGAGAGGGAAGGGGAAGGCTAGGCTGAGGCCTGCCAAGAAATTACCCTGCAGGAGGGAGGGCTAGGAAAGCCAGTACCTCCAGTGGCCAGTTAGCAGAAAAGCAAAAGAAGCCAGCCAACCAGTCGAGAAAAAATCCTAGGGTGCCCAATTAGTGTTGAATTTCAGATAAATGAGATGTCCCGTTTTAATATAAGTATGCTATTCCTAAAGCTGTGAAGATCAAACATGCAGTACTTATTTAATACATATTTAGTATTTCCATGAAATGTTATTTGTCTTTTTAATTTGAAATGCAGGCCCAATTGGGCATCCTATATGTGTGTGTGTGTGTTTAAAGATTTAATTTATTTATATGAGCATTTTGTTGCCGTCTTCAGACACACCAGAAGAGGGCATTAGATCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTCTGGACCTCTGGAAGAGCAGTGAGTGCTCTTAACCGCTGAGCCATCTCCAGCCCTATATGTGTGTTTTAATGTATACCTTGATGCATAGGTGTCCATATAAATGCCATAGTCTTTTCAGAAGCTGTTCTCTCCTTCCATTATGTGGGCTATGGGCATAGAACTCAGGTTATCAAGCTTGGTGGCAAGTGCCTTTATCCACTAAGGCATCTTGTCAGCCCATGGTTATTTTGTTTGCTTCTGTGATAGGGTTTTGCTGTGCAGCCTAGGTTGGCCTGGAACTCATTATTCTCCTTCCCGAGCCTCCCAAGTTCTAGGGTCACCAGCATTCACTTTCATGCCCAGCTCTGTGGCAGCCCAACCCTGCTGTCTATAGTTATGGAACACTTGGTCACATCTGTCACTTTTACTTAGCTTCTGTGCTTGGTGGACACCCTCCCTCCCCGACAACTTCCCCAAGAAACAAAAACAGTTCCAGACAGAGCGCTGGCATAGGACTGAATAGTTAGTGAATAGCTTAGGTAACCTTGCACTCTGGGATGTATCTATCACCCCAGGTCCCATTCTTCTGAAGGGTATGAGAAGGAACAGCATCTTTTCCCCTTCAGTCCTCAGTTCCTGGGTGACATCAGGCTGTTTCCTCCTCCCAGTCCCAGGTTCTGTACCTACTCTGGTGGTTCACCATGCGATTCCAGGCTCTTAGGTAGTGAGGGACAGTGGGTGGCCAGGGCACAGAGCTAATATCTCTTTAATCGGAAAGTACTCTGGACCTGGAAGCCAGATAGACTCTGGAAATCACCCAGGTAGTGGGCCAGGGTAGAGAGAGGTGGAGGAATGTCAGGAGGAGACCAGGAAGCATCTTGTAATGACACTTTTGTCACAGATGCTGTGCTCCTTAGGACTTCCCTCTGTCATGGTGTCCTTCCCGTCAGCCTGGGAGGTGGGCAGCAGCATCTGAGAGCCACCCAGGAGCCTCATGTTGATCTCTAGGTCCCCAGACCTCTTGAGTGAGCACCAGGGAAGTAGTCTATGAACTCTATTTATTGTATGAGCTCCATCTGGGGCTTTTCTGTACACAGAAGCTTGACAGCTGCTTGTGGGGAAGCCTTGGCTCTCTGGCTCTGCACCTTGCAGCTGGGTGAGTGTCTTACTTATGTTACTATTGCCGTAATGAAACACCATGACCAAAAGCAAAGTGGGGAGGAAAGGGTTTATTTGGCTTAAACTTCATCATCTAAGGAAGTCAGAGAAGGAACCTAGAGGCAGGAACTGATACAGAGGTCATAGAAGGGTGCTGCTAACTGGCTTGATCCTCATGGCTTGCTCAGCCTGCTTTCTTATAGAACCCAGGACCAGTAGCCCAGGAATGGTACCACCCACATCAATCATGAATTAAGAAAATGCCCTATAGGCATACCTACAGCCTGTTCTTATAGAGGCATTTTCTGAATCGAGGATACCTCCTCTCAGATGATTTTAGCTTGTGTCAAGTTGACATAAAACTATCAGGCACAGTGATATTACCTAAATTGCTGACAGTCTCTAGGCCTAAGATTCTTCTGAAATCAAGAGAGTATAAGTGTGAGACCCGGAAAGCTATTCTCAAGTAAAAAATTGTGGCTTAAAAAAAAAAGTTTCTATTCATATATTTTCTTTTCCTTTCTTTTCTTTTTATCTCTTTTCTTTTAAGACAAGATTCACCGTGTAACTCTGACTAGCCTGGAACTTGCTATGTAACTTGCTATGTAAACCAGGCTGGCCTTGAACTCACAGAGATCCATTTGTCTCTGCCTCTTTGTATAACACTATGCAAATATCTTCATAACAATGTGCATGCACCGTGTGGACATGTGATCAGCAGCTTGAGATGTCATCATCACAGAAGGCTTCTTCATCAATGGCTCCTAGCCTTGTCCTGGAGCCATAGTGAAAGAGGCTCACAGGGATTGAGAGCAAGACTGTATGCCCAGCTTTGGAGGTGCGTGGAACAGGTACAGCCTACACCAGGCCTGAGAGAATCAATGTCTCATCAGGGATGCTGGTTAGGCCAGGCCTCTTCTTGTGTCTTCCCTTTCCAGCCATGGTCTTGGTGTCCTCCAGAGTCTCAGCCCTCAGTACCAGAGAGGAGGTGCTTGACTCTGTTGTCCTATGACCTTGACACTTGAAGATGTAGGCTTCGGGGCTGGGAGGAGGGTGGATGTGGCTGAGCTAAGCATAAGTGCCTTGTCTCTGCCTCCATCCTAGAGATGACACAACAGATCTGTAGGGAGTGTCCTGGCACTTGGGGGCTGGAAGCCCGAGTGGTCACCTCTGTGGGCAGAGTCCTTCCATGATAGAGTGCCGTGGCAGACAGGGTGCTTATCCAGGCCCTGTGTCATACATATCACTTAACCATACTAACTCAGGGCCGGTGGGGGAGGCCATCCTGAGCCCCGGAGACTGCCTCAATTTTTTGATGTCAGCAGGCTTGCCTCAGGCAAATGAATGGGGATTACTGTCATCTGGATTGGAGGGAAAAAAAAAAAAAAGCTAAAGCCTGCCTGAAGTCACGTGGTTACTTTCTCTTAGACAACTCCAAGGTGACTCTCTATTTTTTTTTCTAAAAATAAAATAAAAGCAGTTTTGTTTTCCTGATTATAAGAGTAACAAGCTTCAGTTATTGGACCTTTGGGAAGTAGATACATGTTACTTGGCCACAATAAAAGTCAAAGACAAACAATCCAATGAAAGCAAGCAACAAAAACAAAAACAAAACAAAGCCAAACAACAGACAAACAAACAAAGTCCAGAGGATGGGGAGTTGGCTCAGCAGCTGAGAGCATTGGCTACTCTTGCAGAGGACCTGGGTTCAGTTCCCAGTACGAACATGGTGGCGCACAACCATACGTAATTCCAGTTCCAGTGCACCTGATGCCTTCTTCTGATCCTGAAATGCATTGCACATGCTGCATGCACTTGCATACATGTAGGCAAAAACTCACACACATCTTTAAAAAAGGCAACCACCACCACCACAACAAAACAACAAGATTCCTTTTACTACTAAAGTTCTATGTCAAGCCAGGCAGTGGTGGCGCACGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAAGCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAAGGCTACACAGAGAATCCCTGTCTTGAAAAAAAGCAACAAAACAAAACAAAAAACCAAAAGTTCTATGTTAAAAAAAAAATGTTTATCTGGGTATAGTGATAAAGACCTTTACTCCCAGCATTCAAGAGGCAGAGGCAGGCAGATCTCTGAGTTAGAGTCCAGTCTTGTCTACAAAGTGAGTTCCAGGATAGTTAGGACAATGCAGAGAAAACCTGTCTCAACAAACAAACAAACAAACAACCCATATATCTAGGGCATTGTGGTATATGGCTTTAATCCCAGAATTCAGGAGGATATATCACACAGGTGGGCATATCTCTGAGATCAAGGCCAGCCTGGAACATAGTGAGTTCCAGGGCAGCCAGAGCTACCCTGTCTCAAAACACCCAAACAAACAAACAAGAAATAAATTAGACACAAAATGATAAATTCTGTGTTGGCTAGTTTTATTTCAGTTTGATACAAGGTAGAGCCATCTGAAAGGAGTGAACCTCAGTTGAGGAAATACTTCCATAAGATCAGGCTGTAGGCATTTTTTAAATTAATGACTAATGGGGAAGGACCCAAGCCATTGTGGCTACCCCTGTGCTGGGGGTCCTGGGTTCTGTATGAAAGCAGGCTGGGGAAGCCATGAGAAGCAAGCCGGTAAGCAGCACTCCTTCATGGCCTCTGCATCAGCTCCTGCTTCTAGGTTCCTGCCTTGCTTGAGTTCCTGTCCTGACTTCCTTCAATGATAAACAGTGATGCGGCAGTATAATCCATTCCTCCCCAAGTAGCTTTGGTCATGGTGTTTCATCACTGCAATAGTAACCGGAACTAAGCCAACTACTATACAGTTGGCTCCACATCTAAGGAGGACCAGAGTGATGAAATTCACAGAAAAGGAAGGAAGATGTGGGGGTTGCCAGGGGCCAGGGAGTGGACATTTAATGGGGACAATTTCAATTTGAGAGGTATATGAGCTTTGGCTGTGTGGTGCCAGGATGAGCCCTTGACCCGACACCGTGCATACATCCTTCTCTCCATGAAATCAGCTTATTATTTAATCAGACGGAGTGTCTGCCAGCCGAGACAGGGAGGATAATTGGGAATTTTCCCCTGTGTGATGGTGGATATTTAATGAAAGTGGCAGTAGAAGACAAAGGTTAGCACTATAAGAAATTAGAGCCCACGCTCCTTGGCACCCGAGAGCAGCAGCAAGCCTCATGGCGCTACGGGCATACCTTCTGATGCAGTGTTCCTCTCTGGCACAGGATAGTTCCAGCTGAGGCCACAGCACACACACCCTCTCCAGATGTTCAGAGTGATGAAGAATAGGTATCTGGAAAAACACCAAACAGGGTGTCAGAAGACTTGGGGGTCCAGGCCAGAGTCTAGGTGATTGTCTTAGTTAGTTTTCTATTGCTGTGATAAACATCATGAAGCCAACCTGGGGGGAAAGAGTTTATTTCATCTTACAGGTCAAAGGCAAAGGGAAGTAAGAGGAGAAACTCATCTTATAGGTTGCAGACCATCGTTGAAGGAAGTCAGAGTAGGAACTCAAGCAGGGTAGGACGCAACACAAAAACCATGAAGGAAAGCTACTTACTAGCTTGCTCTCAGGCCCACCTGCGTAGGGACAGTATCACGCGTAGTGGGATGGGTCTTTCATGCCTGTAGGCCAGAAGGGGGCACCAGATCTCATTATAGACGGTTATGAGCCACTATGTGGTTGCTGGGAATTGAACTGAGGACCTCTGGAAGAGCAAACAGTGCCCTTAATCTCTGAGCTAGCTCTCAAACCCCTGGGCTGGATCTGTTTTTTATTTTTTATTTTTTTATGTTAATTAGCCACCAAGAAAATGCTCCTACACAATCCGATGGTGATAATTCTTCAGTTGCAGAGCCTGCGCTCAAGATTAGCAGTCACAGTGACCTTAGGCAAGTTGTCTGACTCCCCTTCACCTCTTATCTCTGTTATGAGGGGGAGCTGGGGAAGGAGTGTCCTCTCACACATCTAACTTTCTACTGTGTGCTGTGTGAGAACAGACAAAGCCTGAAAGCTGAAAGCCTGGCGGTGTGCGTGAAAGGCCTCAAAGTGCTATTTTCCAGCTTTTTGGGGACTTGAATGTTTTTCAGAGAAATGCAAGGAAGGGCTTTTACTGGTGCACCCCCTTTCACCCAGCAGGAGGCAAGAGGAAGAAGCAGGCTTGTAGGATGGCTTTGTGAGAGAACAGGCTGTAGCTGCCTTCCTCCAAGATGTGGGAGGAGCTCCTGAGAGCTGGAGCTGGAGCTCTGAGGTGAGTCAGTTGGATTGGCTTTACCACACTCCTTCCTCAAGCCTACCTTGTCACTAAGGCCTCTGACACTTCTGGAAGACTGACCACAGCCATGTCACAGGTTTTGGCCCCCGATTATACAATAGAGAATGCAGCTCAACCGGTGACCAGAGAAATAAAAAAATCTATCGGCGACATTCTTCTCTATGGCCTGTCAGGTTGATGACGATAAGTAGGCGACTAGCCCGAGCTGGAGAGATGGCTCAGCCGTTCAGGACAATTGCTGCCAATCCCGATGACCTGGTTTTGATCTCTGGGACCTATGTGGTAGAAGGGAATTGGTTCCTGCCTGCTGTCTTCTGACCTCTGCAAATGTACTGTGGCACACGCCCTTGACCCAAGATATAAAAATAAAATGCAATAAAAACTCTAATAGGAGAGAAAACAATCCTGGAAACATCTGGGAAACGAGTGAGAAGATCATGACCTCTCTACCATAAAGTACCTTGCAGCCATTAAATGTGTATTTTTGCATGTGTCCTCATGTGGTATATATGCATGTGTGTTATATACCCACGTTGCATGAGCCATTGCGGAAAAAGTACATCTGGAGGTCAGAGTACACCTGATGTCATGGTTTACCTATTGCCTTTAGGCAGGGTCCCTCACAGAACCTAGGGCTAGGCTGGAAGCCAGGAAGTCCCAGCCGGTCACCTGACTCTGCCACCCACAGCACTGTGCTTACAGGTACGCATGTGGCCATGTCTGCCTAAAAAATTGGTGCTGGGATTACAGGTACATTAACAACCTCGTCTACCTTTATATATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATTCTGGAGACTCCAACTTTGGTGGTCATTCTTTCACAGCAAGCTCATTTAACCATTCCATCATCTTTCTAGTTTCCAAAGTGTATTTTATTCTATAGTACCAAGACTCAGGAGTCTGAAGTGGGAGGATGCCTTGAGCCTAGGAGCTTGAAAGCAGCCTGGGAAACATAGGAGACAAATCCATAAAAGTGGTATTTGGTGAATGAAAAGATATTCTCCATGGGCTATCAAACATGGTGCCGGAGGTATTTCTACCAGACAGATTTGTCTAAGGAGATTTGCTAGGTCCATTTAGGAGAGGACCTAGAAAGGTCTAAACTATTGCGCAAACTGTATTTATAAGTTTTTCCACCTGCCTTCCGTTCGTTTATTGCTGTTGTCTCAGTGTGTACGCAGGATTTGCCTTGTAAGCAGAATTAGGAGAGCAGAAGCCTATCTTTAACAACAGAAGTGCTTAGGAGAGCTTGTGGCCAATCGCATTGAGCAGCTAGCTCTCTTGAGGCCAGAGCCTGAGAAAGGCCCCCTGGGAGGTCTGCGCCCAGCCTGTTCCTTGGCGAGGGGCCGGGCCAGGCTTGAGAGATTAATCTCAATCTACCATCTGCTGTGTCATTGTCTATTTCTAGGATGGCAGTTTGTCACCCTCGCCACTCAGGTGTCAGCTGTGGGAAGAAGTCATCATTCAGGAGATGGATCCTGGGGGTGTGCACGGGAGGAGGACCCCAGCCACTCACGGGAGTGAGGCACCCATCCCAGGAGAGAAGCTGGGCCAGAAGATTGGGCTGGCTGGTGTGACGAATGGATAGAAGGAAGGGCCACTACAGGGTGGAAACCAGAAGGACACTTAAGCTGCCCACCGGGGCGTCACCCCAAGGCGAGGTGATCTTCACAGACACCTTTTCTATAGCCCTCCAGGATGCAGAAGCCTCCAAGCTGGGGGTTTGGCAGGAAATCTGGGCAGCCATAGATAATGTGTGGTTGCAGGGCAGGAACTGTGAGGACAGGGACGAACTCATCTGTGATTTCCACTTTTCACAATCCATCGCAGGGCCACTGAGCACAGGCCAGAGAACCCAACCCTGGCTGAGTAGACAGGAAGGTATCAACGGAAGGATGCCAGCTGATCCTCAGAGCTGAAGAAGCAGGCTCAGAAAAGGACAGGGCTGCAGCTCAGCTGCAAGAGTGCTCCCTCGGCACGAAGGAAGCCCAGGGTGCCAACTTTGGCACTGAAAACTGGGTGTGGTTGACACAGGCCATGTAGGTTGAGGCAGGAGGACTGCCTGTTGGAGGCCAACTTTGGCTACCTAGTGAAACTCTATCTCAAAAAACAAACAAACAAACAAACAAACAAACAAACAAACAAGCAACCTAAAACCTTCAAACAAACAATAATCAGGAGGGGGAGGTAGTTTTGGGGCAGCAGGAAGGGTTGCTGGACTAAGTGGGCTCTGCTTTCTTTTGAGTTATTGAACTTTAGTGTTGTTTGTGCTGGCACAGAGAGCTGCTAACCCCATTGTGGTCATTCCCTGGTTGCTGAGGGAAGAGTGGCTGTGTGTGCTCACGTGTGCAGGCTTGTGCTCATGTATGCATTCGTGTGTGTGTTTAAGCCTAAGGATGACCTTGGCTATCACTTCATAGATGGCATCTGTCCTAGTTTCGTTTCTCTTGCTGTGGTAAAATCCTGACTAAAACCAATTTGGGGAAGAAAGGATTTCTTTGGCTGACAGATTAGATAGAGTCTGTCATCAGGGAAAGCCAAGGCAGGGACTGAAGCAGAGATTTCCGAGGACACTGCTTGCTGGTTTGCTCCCCATGGCTTGCTCAGCCTGCTTGCTTATACAAGCCAGGACCACCTGCCCAGATGTAGCACCATCCAGAGTGGGCTGGGCCCTACCCCCACCAATCACCAATCAAGAAAATGTTCCACAGACACACCTCAGGTCAATCTGACGGAGACAGTTCCTCAGATGACAATTCCCTTCTTCTAGGTGACTCCAGACTGTATCAGGTTGACAGAAACCTACCAGCACACCATTCATCCTGCCTTCTGAGACAGAGTCTTTTACCAGCCTGGCACTCTCCAAGTAGGGCTGTGGTTACCATCACAGAGCACGGTGCATTTTTTTTTAAGATTTATTTACTTATTATATGTAACTACACTGTAGCTGTCTTCCAACACTCCAGAAGAGGGCGTCAGATCTTGTTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGATTTGAACTCCAGACCTTCGGAAGAGCAGTCGGGTGCTCTTACCCACTGAGCCATCTCACCAGCCCGGTGCATGGCTTTTTAAAAGTGGACTCTGGGTATTGAAATCAGGTCCTAACGCTTGCTATCTCCTGAGCTGGCAAGCAGTTTTAAGGAGTTGCGCTAAAGCACACTGTCTTAGTTGGGGTTTTACTGCTGTGAACAGACACCGCGACCAAGGCAACTCTTGTAAGGACAACATTTAATTGGGGCTGGCTTACAGGTTCAGAGGTTCAGTTATTATCATCAAGGCAGAAGCGTGGCCGCATCCAGGCAGGCATGGTGCAGGAGGAGCTGAGAGTTCTACATCCTCATCTGAAGGCTGCTAGTGGAAGACTGACTTCCAGGCAGCTAGGATGAGGGTCTTAAAGTCCACACGAAAATCACACAACTATTCCAATAAGGCCACACCTCCAAATAGTGCCACTCCCTGGGCCAAGCATATTCAAACCATGACAATATGTGTACTTGCATACACACACACACACACACACACACACACACACACACACACACACACCACACACTAAAGCCTATCTTTTACACCTACTTCATAAACTGGCCAGCCCTGAAATTCTTTTCTGTGTTGAATCAAACACAGAGTCACTGTCTTCAGACAGACCAGAAGAGGGCATCAGATCCCATTACAGATAGTTGTGAACCACCATGTGGTTGCTGGGGATTGAACTCATGACCTCTGGAAGAGCAGTCAGTGCTCTTTAACCGCTGAGCCATCTCTCCAGCCCCCAAACCAGGATTTTTGTTTCAACACAGAAAAGAATTTCAGGGCTGGCCAGTTTATGAAGCTGATTTTTCTTTTTCTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTTTTCTCTTTTCTTTTCTCTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTCTTTTTTCGGTTTTTTGAGACAGGGTTTCTCTGTATAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAGGCTGGCCTCAAACTCAGAAATCCACCTGCCTCTGCCTCCCGAGTGCTGAGTGCTGGGATTAAAGGCGTGTGCTATCACGCCCGGCATGAAGCTGAATTTATTAAGGATTGTTTAATATAGAGTTAGATGTGAGAGTTAGAAGAGAAGGGGGCTCTTAGAAGGACAGACAGACACAGCTGAGAACCAATTTACTCAAAGAGTCCTAGAAAGTATACCCAAGTATGTGTGGGCTACTCAAGGAAGAGTGGCACGTCTAATCGGTATAAGTCCTGGTTAGATGTCTGTCAACTTGACACAAGCTTGAGCTATCTAGGAAAAGAGAAACCTCATTCCAGAAAATGCTTCCGCCAGATTGGCCTGTGGGCTTGTCTTTGGAGGCATTTTCTTAATTGATGTTTGGTGTGGGAGACCCCAGCCTACTGTGGGCAGTACCGCCCCTGGGCTGGTGTCCTAGGCTGCATGTGAAAGCAGGCTGAGCAAGTCATGGGGAGCAAGCCTGTAAGCAGCACTCCTCCATGGCCTCTGGTTCAGATCTTGCCTTCATGCTCATGCCTTGAGTTCCTGTGCTGGTTTCTCTGATGATGGACTGTAATCTGAAAGCTAAATGAAGCTCAGTCTCCTAAGCTGGTTTTGCTTAATGTTTTGTTACAGCAATTGAGACCATTCTAGATGGGGCTGGAGAGATAGATGGTTTAGTGGTTAAGAGCACTACCTGCCCTTGCAGAGGACCTAGGTCTAGTTCCCAGAACCAACATGCTAGCTTACAACCACCATAGCTTCAGTTCCAAGAGATTTCATGACCTCTTATGGGCTCTGTGGGTATTGCATGTACATGATGCACAAATATAGGCAAAACACATAAAATAAAATTTAAAAAAATTCTAGGAGAAAACATATGCTTTTATATTCAAATGGTTGCTTAATTAGATACTTTGGTTTGTTTGCTTGAGACAAAATTTCATATAACCCTCAGTATATGCTGAGACTACAACTGAGACTAGCCTTGAACCTTGACCCTCATGTCTCCACCTTTCAAGTGCTGAGGATACAAACACACCTGGCTCCTGGGGACACTTTGAATTGCCCCACTGGCTGGGGTCCTGCTGGCATTTCCTGTAAAGAGGATGGGATGTTAATATCCTAAATCACATGGATGGCACAAGCCGAGGACGAGAGTCCCATCGAACATGCCATCAGTCATGTTTGGGGTTAGGAGGCAGCTCAGTTGGTAGAGCATTTGTCTAGTATGCAGGAAACCCTAGGTTCAATGCCCAGCACACATAAACCAGGCATGGTAGAGTATGCCCATAATCCTAGCACTTCCAGAGGTGGAAGCAGGTGAGTTTGAGTGGCAAGGCCATTCTTGGCTACATATGAGTTCAAGGCTAGTCTGGGGTACATGAAACTCTGCCTCAAAAACAAAACCCAGGGGCTGGAAAAACAGTTCAGTGGTGAGGACAGTGTATTGCTTTCAGGGGACTGGAGTTTGATTCCCAACACCCACATCAGACAGTTTATAACTACCTGTAATTCCAGTTCCAGGGGATCTGACATGTCTGGTCTTTTTTGTGTGCATACACCCCCCCCCCAACTTTAAGTCAGTCAGTCAGTCAATCAACCAATCAATTAATCAATCAGCCAGTCAGTCAATAAGTAAATCACAACTCTAAATAACTCAGTGGACCACACATAAAGCATGGGCAGCCAGATGATGGTGACGAATGCCTTTAATCCCAGCACTTGGGGGGCAAAGGTAGGTGGATCTCTGTCTGTTTGAGGTCAGCCATTGGGGGTGGGGATGAGATGTGTGTGTAAATGACTATACGTGTTATATACATGTAGAAAACTATCAAACTATTGAACAAACAACAGCAATAAAATCCAAACAAAAACAGTGCCAGATTGAGAAACCTGGTCTATGATAAAATACTGTTAAGGAAGAGACGGAAACCCTAAAGCCAGACCCCAACATGGAAGCTCTTCACCAGTCACACGGGTACTGCTGCCGATGGCTCCAAGGGCAGATCTCCGCCCTCTTCTGCCTGGCCCCGTAAATCCTGCTGATTGTCTTTGTCCAGTCCCTCTTGTTTGTCTGCCCTCTGTGAGCGCAGGAGAGCCAGTACTTCAGGATGTCTTATCACAACTGAGAGCGCAAGTCCAGCCTCCACCCTGGTGGGTTGCTCAGCGGTTTCCCAAATAAGCCCTTTTCTTCCAGCCACAGAGAAATGTGAAATGACATTTTCTAAAAACGCCGCTTTGTAAAAATGCCAAGGCTAATCTCGAGGCACAAAGAGCATTGTGGAAATCGGAATTGACTCAGGGAGCTGCAGCCTGGGAAGGGGACTGAGTTTAAAGGTGCATGCTAGGGGTGTGCATGGCTATGGACTCTGAAAGCTGAGCTGAGACCCGCTATGAGCTTGAGGGCTGCGTGTCACCTGCGGCTGTTAGAACCCTGCTCATGCTCAGGCTGGACTCTTCTTTCTTGTTTTTAGGGCATTTGGCTAGAGGCTAGCACAGCTATCAAGAAGAGGCAGACTGACTGATTTTAGCACTGAAGAAAGAGATGTCTATTTAGGAGTCCCACTAGGGAAATCTTAGAACTTCCCTGATGCCCAAAGGCTTTTCTTTTTTTTTTTAATTTTTTTATTAGGTATTTTCCTCGTTTACATTTTCAATGCTATCCCAAAGGTCCCCCATACCCACCCCCCCAATCCTCTACCCACCCACTCCCCCTTTTTGGCCCTGGCGTTCCCCTGTACTGGGGCATATAAAGTTTGCAAGTCCAATGGGCCTCTCTTTGCAGTGATGGCCAACTAGGCCATCTTTTGATACATATGCAGCTAGAGACAAGAGCTTCGGGGTACTGGTTAGTTCATATTGTTGTACCACCTATAGGGTTGCAGATCCCTTTAGCTCCTTGGGTAATTTCTCTAGCTCCTCCATTGGGGGCCGTGTGACCCATCCAATAGCTGACTGTGAGCATCCACTTCTGTGTTTGCTAGGCCCCAGCATAGTCTCACAAGAGACAGCTATATCTGGGTCCCTTCAGCAAAATCTTGCTAGTGTATGCAATGGTGTCAGCGTTTGGAAGCTGATTATGGGATGGATCCCTGCATATGGCAATCACTAGATGGTCCATCCTTTCGTCACAGCTCCAATTTTTGTCTCTGTAACTCCTTCACCCAAAGGCTTTTCAAGTGCTCTGAATAAGTATGTTGGTATTTGATTTTTAAAAAAAGTGTCGGCCAGGCAGTGGTGGCGCCTGCCTGTAATCCCAAGCGCTTGGGAGGCAGAGGCAGGCGGATTTCTGAGTTCGAGGCCAGCCTGGTCTACAGAGTGAGTTCCAGGACAGCCAGGACTACACAGAGAAACCCTGTCGAGACCAAAAAGACAAAAGAAGTGTGCCTAATTTTTAATATTCAAGTGTGTGTGTGTGTGTGTGTGTGTGTGTAGCTGTGTGTAAGAACCTAAGGACCTGGAGGGGATAGGAGTTCCACAGGAAGACCAATAGAGTGAACTAGTCTGGACTCTTGGGTGCTCCCAGAGACTGAATCATCAACCAAAGAACATACATGGATTGAACTTACCTCCCCAACCCCACACATATGTAGCAGATGTGCAGCTTGGTCTTCATGTCAGTTCCCAACAACTGGAGCAGGGACTATCCCTGACTCTGTTGCCTACCCGTGGATCCTCTTCTCCTTGAAGCAGTCTTCCCAGGCTGCTTATCTGGCCCCAGTGGGAAAGGATTGCCTGGACTTGATGTGCCAGGGTTAGAATCCAGTGGGGGCCTCTCCCTTTAGAGGATAAGGGAATAGAGGATGGAGAGAGGAACTGTTTAGGGGGGGGCGGGGAGGAGGAGGAGGTCTGAGATCAGGATGTAAAGTGAATAAATAGTTTAGTGGGGAAAAAGGATGAGCATGGTGGCTCATTCCTGTAATTCCAGTATTTGGGGGAGAGAGAGAGGCAGGCAGACCTCTGTGGGTTTGAGGCCAGTCTGGACTATAAAGTGAGCTCCAGGACAGTCAGGGCTGTTACACAGAAACCTTGCCTCTAACAAACAAACAAACAAACAAGAAAGAAAAAGAAAAGATTGAACTAAGTGGGGCTGGAGAGATGCCCCAGCAATTAAAAGCACATACCACTCACTCTTTCATGGGACCTGAATTTTGTTTCCAGCAACCTATGTCAAGCAATTCTAGATGATCCAATGCCTCTGGCTTTCAAGGGCACTACATGTAAACACGCACATAGACACACATGCAGACACACACATACAGGCACTCATGCACACATACACTTACAGAGACACGCACATACACACACACACACTGTGACTAGAATCAGTAGGATGAACAGAATCAATATACACTTACATGCATATATACGAATAGAAAGTCAGTTCTATTAATTTATACATTTAATGTGCAATTATGAGGAAGCCAGGTGTGGTGAACACAGGCCTTAAATCTCAGAACTTGAGAAGCAGAGGCAGGCAGATCTCTGTGGTTTTGAAGCTAGCCTGGTCTACATAGTGAGTTTTGGGCTATCCAGGGCTACCATGCCTCAAAAAAATAAATTTGTATGTGAAAAATCAAAGCCACGTATAAACCAAAGAGCTCTGGTTGTCTAAATCCTTGGGTCTATAAAGCAGCTGCATTGATTTCGGGAGAGGTCAGAGTTGCTAGGCAACTGTTCCCTTGGGAGGGATACATGCGTGGGGCAGCTGTGGATGTACCAGGGATGGGCCAGCCTTGAAGGAGGCAAGAAGCTCCAATATTCTTTCTCCATCTTTGTTTCTGAGCTGGAGGAGATGAGGCACACTAGTAAGAACCTCAAGGGTGGTTTGGGGGTGCTGGGCAGTGAGAGAGAATATTTTTTGCTGGCCACAAGGGGTCTCATTAAGAAGGTTGGAAGACAACATTCTTACTCTGAGATGATGTTAGGAAAGGGTTGGGGGTGAGCTCTTTGCAGCTTGGAAACACAGAAACAGAGAACAAGAGAGACTTTCCTGAATACTTGAAGGCACCAAAGGTAAGCAAGGGTTAGCTAAGTTTCCTGTCAAAATGGTGTCTTTCATTTTCTCCCTGGAAAAAGTGCCCCTTATAAATCTCTCCACAGGTAACAGGAAGTCTCCAGAGCTGAAGCCTGGGCTCTCAAGCCTAGATTTGAACCTGTGAAGCTAGGTTACCAAAGCAAGTGTTGTGAGAACTCCTCCCTGGAGGTACTTCTGAGTAGTCATGGGCTGCAGCCTAACCCTCTCTCATTCCACCCATCTCTCCTCAG
Seq C2 exon
GCCTCGATGCCATCCAGTGTTCACTGCCCATGGAGGACCGGAGGGTGGCCCTGAGGGAGCTATCCGAAGCTAGTTTCAGCGAGTGTAAGTTCAGCCTGTCTCTCACAGACCTATTCATCATCATCTTCTCTGGGGTGGCTGTGTCCATTGCTGCCATCATCTCCAGCTTCTTCCTGGCCACTGTGGTGCAGTGTTTCCAGAGGTGCGCCCCTAACAAGGACACGGAAGATGAGGATGATGATGAAGATGACTGAGCCACCTCCTCCCGCTCTTTGCTTTCCCACACTCAGCCAGTGGCACCTCTCCAAGGGAGACTGATGCTGAAGACAGGAGCATCACATCACTCCAGGCAGTAAACGGGATGGAGCTTGCCTAGATGCACCCGCTGGGGACAGCCGATCCCAGCGTATAGAATCAGCAGAGTAGAGACGCAGGAAGGATGGAGAGATTCACTCTTAAGCAGAGCCAGCCTCCCAGGCTGGGGGACTCGTGTGTGAAGATAATCAATTCAGGCTTCATGGCTTACAGCTTTACAACCCTCCCAAGCTGAAGTGAGAGCTCACAGCTTCTGACCTCAGAGTTGTTTGGGCCGTTCTTATTACAAGTTGCACAATGGACCATGAGCCCTCTTCCCCATGAAAGACAGTAGTGTTCTCAGTGTAGATTCGTGTCGAGCTCCTTCTTCACAGGAGCAGGAATCGTTTTCTTCTATAGAAGATCCCAGGAGCCTTGAGATGTTAGACCAAGAACAAACACATCTATTTGCCATAGACAATGTCTGTCTCCCCTGTGTTGCTGCAATGATATCTCACACCCAACGTGATGAACGTGGGTTGATGCGCGATGACCTGAGCCCGCAGTCCCGAGCTGGTGGGCTGGGGACCTAGACCTGAGGCGGAGGCTCACAAGGGGACCCAGTCCTTCAGGGTGTTTTGAAGAGGGCCCTTTGGATATGATTCCGTCTTGAGACCGAGTGCATTTACTGCCCTTATAAATCAGACTTTGGGGGCCTCCCTGTCCCTTCTATCCAGTGAGGACCCAGTGAGAGGGTCTATGAACCAGGAAGGGGTCTCTCACAGGAACTCAACCATACTGGTGCCCTAGCCTCTACCTTCTAGCCTCCCAAACCGAGAGGAATAAATGTTTGTTATTTATAAACCCTCATGTCTGTGACTGGGGGGGCTGAGGGGGAATAGAAGCTCAAGGATGCTAGGACACCATCTTTAGCTGAAATGTTACCAAAAAATAAAAGCTTAGGTTTTGTCAAGA
VastDB Features
Vast-tools module Information
Secondary ID
ENSMUSG00000028584:ENSMUST00000052458:1
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.005 A=NA C2=0.131
Domain overlap (PFAM):
C1:
PF0146213=LRRNT=WD(100=13.5),PF138551=LRR_8=WD(100=27.9),PF138551=LRR_8=WD(100=27.9)
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Pre-implantation embryo development
- Ribosome-engaged transcriptomes of neuronal types
- Neural differentiation time course
- Muscular differentiation time course
- Spermatogenesis cell types
- Reprogramming of fibroblasts to iPSCs
- Hematopoietic precursors and cell types