GgaINT0133149 @ galGal4
Intron Retention
Gene
ENSGALG00000004097 | LRRC38
Description
leucine rich repeat containing 38 [Source:HGNC Symbol;Acc:HGNC:27005]
Coordinates
chr21:5219776-5230938:+
Coord C1 exon
chr21:5219776-5220363
Coord A exon
chr21:5220364-5230684
Coord C2 exon
chr21:5230685-5230938
Length
10321 bp
Sequences
Splice sites
5' ss Seq
AAGGTAAAG
5' ss Score
9.06
3' ss Seq
CCCTCTCCTCTTCTTTGCAGGTC
3' ss Score
12.81
Exon sequences
Seq C1 exon
TCTTTGTCTGCCTGCTCTTCTTACCCGCGGGTCATCTTTGCCCTGCTGTCTGTAGCTGTATGGACTACCACACCATAGACTGCCGGGATCAAGGACTCCCCAGTGTTCCCAATCCGTTCCCATTGGACGTGCGGAAACTTCTTATAGCCGATAACAACATCCAGGCGATACCAGCTGATTTCTTTATATTTTATGGAGACCTGGTCTATTTGGACTTCAGGAATAACTCCCTCACCTCTTTAGAAGAGGGCACTTTTAGCAGTTCTACCAAACTGGTGTATTTAGACTTAAGCTACAATAATTTAACGCAGCTTGAAGCCGGGATATTCAAATCGGCAGAAAAACTGATAAAACTCAGCCTGGGAAACAACAACCTGGTGGATGTGGACGAGGCTGCTTTTGAGAACCTGGAACAGCTCCAAGTGTTAGAACTGAATGACAATAACTTACAGAGCCTAAACGTGGCAGCCCTCGAAGCGCTTCCCTCCCTGCGGACCATACGCTTGGAGGGCAACCCGTGGGTCTGTGACTGTGACTTTGCCAATCTTTTCAGCTGGATCCAGGACAATGCCTCCAAGCTCCAGAAAG
Seq A exon
GTAAAGCTGTGTGTGTGTGTGTCTGTGTGTCTGTGTGTCCTGCCTGCAGTGACCCCGACTGCCTTTTGGTCAGACTGTAATTGCATGCTTCCAACAAACGAGTCCATTAAAATGGTGTTGGTTTCTTTCTAGCGGCGGGTCCTCCTCCCGGCTAAGGAATAAATAGTTTTGATTTATAGGCTGAAGTTGCATAGGCAGTGAAGGAGCCTTTTCAAATCCGTTGTGCCCAGAGCTGCTTCTCTTCCAGACATCGGTTTCTTCCCGGTAAATACGTTCCACAATGAGCCCTTTGAACAGCTGAATATCCTGTGCCAGCCCCTTAGGAAAACTGTGCTCTCTCTCATTTTCCTGATCAGCCACAAAGCTGCTGCAGAAGAGTTAAATCCCCATTTTATGCAACTGTGGCTGCCAGCCCTTCTCCAGAATTATTTTGTTGCGATGCTCTGAAGCCCTGTTTGGTATTTCGATCATGGTGCCTTTATTAAAATAGCCCCGCTTCCAATATTAGGAATAAATGAAAACACTCTGGAACATCCTCAATGCAGGATATACAGTTCTGGAATTTGAGCTAGTAATTTTCAGAAAAGCATTAGGAAAAAAAAAATAAAAATAAAGCAGTATTCAGGCTGCCACGTGTGGGGCTTCTGCTCCACGTTTCCCATCTGACCCCAAAGCCACCGCTGATCCAGCTTTAGCAGATCACCTCACAGTTCACTCCTCCCAACAAGCACCAGGGCACCCAGTAGCTGCTATCGAGCTGCCCTGCTGCTCATAGAAGGGGAAATGTAAGGGCTGCCACGGGGATATGGGGGTGCAGGAAGGCCGTGGTGCCTGGGCTCTGCCTGAGGGCTGTCTGTGCAGGGGTGAGGGGTAGAAGGACATGGGAGGAGAACTGCAGAGAGTGGGCTGAGGTCAGGGAACTGTTCTCTCGGCTCCAGATGCAGAAGGAGGAGGTCTCCCCTCTCTCCATCATCCATTTGCAAACACTTATTCGAGCTCTTTCTGTGCTCGTGACCTTCAGTGGCAATTTTTATTATACTCAGCTGGGTTGCCCTAAATATTCTTAGCTGTTCAAATATATATATGTATCTATTTTAAGGAAGAAGTAATTTGAGGAAAAAGGGATGGATTTTTTTATGCCTGCCTGAGTGAAGCTTTCCCCTTTCCCTTCTTCCCTACCCCCTTGCCTTTTCCCATTTTCCCTTTTTCCCCTTTTTCCCCTCTTTCCCCTTTTTCTCCATTCCCAGCCAAACTCACTGCTGTTCTCCCACATTCCCCAGTGCCCCAGCTGAAGTTCTTTCTGACCAAAGCATTTGCCTTTCTCGCACTGGCCCTCAGCCACTCTTGCCTTCCCCATGCTTGCCACCTTTTCATGGACCTGTAGCTCCTTCCCCTTCACCCACACTGAGTCTGTTCAGTTTGAAAGAGGCTGTCCCAACCCATCTCTCTTTCCTTTCTCTCCTGTCAGTGCTCATCTGAACTTCTTATGTCTGGAAATCTCAAATGATCAAGCTTTACTGTAGTACTGTCAGTGTTCCTCAACTGCTTCAGTATTTCATCTCATCCAAAGTAATGGAAGCTGCATTTCAGCCATACAGCGAAACAATTACCAGCCCACCTAGATCTTTCAAAGCAAGAGAAGGAGGAAAGGAGCAACCGTTCAAATGGTTGCTTCTTAGGTCAGTTCCTCCCTTCCCATCCTGGCCTCAGCGATGCTTTGCTTTGCACTTAGTGTGGGCGCGGGGCTGCTGAGCTCTTGGCAGCCCACGTGTGCTCAGTGCCTGCACGCAGAGGGCTAAACCCGGTGCTCCGTTGTTTGTGGGCCATGCTTGTCTAAAACCCTTCACGTGGCATTTCTGGGGGTGTTACACCTTCCCCAGCAGGAGTGGGGAGAGCTCCCAGTCTCACCCTCCTGCTCCCTGTTTGCTCCCATTGCTGCTGGATGGCTGGAGATACTCATCCGTGCAGCAAACACAGAAAAGTAGGGCAGCAGCATTGTCTGGAAACACTGCCAAAGAAAAGACTGGAATACATTTCCAGGGCCCAAGGAAAGAACTTACTTACCTTGGCTGTATACTTTTATAATGCTGCAAAAGCATTTCCATTGCATGGCCGACATGAGTGGAAAAGGGAAGGGCAAAAAAAACAGGTTGTGGTGCTTTTCTTGTGTTGATTTTCTTTAAGAATATGCTGTGATTAACACTACAGAGTAGTTTTGTGACAGACTGACACTCCCCAGACATCAAATGACAAACACTGTGACCTGGATTTACTGAGAAGGGAAAGAATAGAGAAGGGTGAATGACAGCAACTTGCACTGGGGATCCCCAGCCCTTCACAAAAAGCACAGAGAGCTGCAAAGAAGCCAATGGCTCTATGAACCCTCGTGTGTTTTCTGCTTGGGATGCTTCAGAATTAGAAAGGAAAAGGATGTGCCAAAGTGAGGTATTGGCACAGGTGCTCAGGGAGTGGTGGGGTCACCATCCCTGGAGGTGTTCAGTGTGGAGATGTGGCACTGAGGGAGGTGGGCACAGTGGGGTGGGTTGGGGTTGGACTCGATGATCTTAGTGATGTTTTCCAACCTATTTTGGTTCTTCACTCTGATCGGCACTTGGGATAGTTCAGTCTGCTCTGCCTGCATGTCTAAGAGAAATCACTCAAGCTGTAACCAGTCACAAAGCCCAGCTGCTGTTCCACCTTTGAATTTTAGCACTGCAGTAAAATATCATGCTGGTCAGACCTGCCTTTGTTTTCTGCAGAAGAAATACCAAGTTGCTTTAAAAATCAGAGTTTTGTCAGTGGGAACTGAAATCTCACTAATTGATCCCGAAACTCTCCACCTCTGCAATTAAGGCCTGTGGAGAGCTGGGTGATCTGAACAAAAGCCATCCTTCAGCTCATTAGTCTCACAAAAGCCAGGTCCATTTCCCTTCTGGCACACTCCCAGAAAAAGCGTGTAAAGCTCTAACTTTGCTGACCTGTCTGACCAGCTGCCTGGAAAGCCTCATCTCAGCTCTGCTGCCTTTGCAAATCTGCCTTGTCGCGCACACAGGCAGCTGGGATCTGCATCATTGGAAGGCATTTATTCATCCATCCTGAATTTCTAACTAAAGCATTAATTGGCGATGAGAAAGGCGCGTGGCAGATTTGCAGGTGGACTTAGTGGAGAAACTGCACTAAAAGTTTTGCTATTAAAGTCAGCAATGTAGCTGCTTTAAAAAAGCAGATCTTATTTTTATATTTGTGAGAAAGATGTTAATAATGGGACTCTCATCATACTTGAAAACTGAGCCACATTTTGGATGTGGTCAATAACTGCAGGGGAAGGAGCTGTGAACACAGTGATGTTGAGTGGAGAAGACGTAACTGCTGTGGTTTTCTTCTTGAGGGGACACATGGAGATAAGAATACTGCATAACTTCTTTTGGAGGAGGAAAAGCTTTTGGAAGGTTTCTCTCCTGTGCTCTGTAGAGATCTGCTGCTGATTTTTCTTTCCATGAACATGCTTTGGGCAGCTGTGCCCACCACCTTGTTCGCTAATGTCCAATGTATTTTTAACATGACTTTTAATTAGCACTTAAATATTCTTTAGCATGTGACTGTAGTGTCTCCTTTCCTTCAGCTTGCCCTCATTTCTTTCTTTGTATTTCTTTCTTCCCAGCATCTTTGAAAGACCTTCTCAAGAAGTTGTATATCATTTCTGGGACTGCAGGTGCAGTGCTAGATGCAATGGTGCTTTCTCAACCTTTCGTGTTTAGTGCATATTCTATGTAATGCATGAATGAAAGGTTTTGCTGCCCTCATCATTAAAATAGCATTAGAAAGACTTGAAATAATGTGGTGAGATGGTTCAGATTGAGCATTATGATGTGTGCACTGCTATTTTCAGAGTGACTTCAAAAATTCATTCAGCGTTGGCCAAAGACAGCAGAGGTGGTGATGGAACTGGTAGCAATGGCACTGATGGCAATGGGAATGGTGGCGATGGGACTGGTGGTGATGGGACTGGTGGTAATGGGACTGGCAGTGGCCTCTGAAGCTGGAAACTCCAACTGAATTCAGCAGTACTTGGGAGGTTCAGAAGTGAATCAGTGCAGTGAGTATGGAATGGTCTTTGTAAGACGCTTTACAAAGGCTGGGCCATAAGGTGATGATCTCTTGGCTCTCAGGATCCTTCTCTAATCTCATTCCAATCTAAGATATGCTATTAAATAAATGTATTCTGTAAATTAAATAAAATAACATGCCGTTTCACTAATCTAGGCCCTTAGAGCAGCCCTTACTGGCTCACTGAAAGCCGTGACCATTGTCCTCAAAGCACAGCATCACAATTACAGGTGGGTACGGTCTGCACGTGGTCTTCTCACCTAACCAGAAAGTGCACAGAGCTTTGGGAAGCTGTCTCAGTCTCCCATTCTTTATTACTCCCCATATTCGTCCGCTCTGTGGAGAAGGCTGCCTTATTTTCATGTACTAATATAGAACCAGGGAAAGCTTCAGCTAAGAAGGACAGGCTGTTCTGCTCTTCTGGCCATTGCAGCCATTCAGTTCTTCCCCAGGAATCATGCACATGTTGTCCATGACTGGGACAGAACATAATATCCAGTTTTTGGAAAGGAACTGAAAGCCTTAAGACTGCCCATTCAGCAGCTTTTCTTCTGTTCAGGCAGAAACTCCTAACAGGAATAAGGTTCCCTAACAAGCGCAACAAATCTGTTTCTATATATATCCATATATAAATACATAATGTGATATCCTAGTCATTTTCAGTAAAATGATCTGACTGCCACTGGCTTTTCACTCTATTTCTTCCATCATAAGGATTTTTGGAGTACATCCATCTTTCACAGATTTCAAGACACGAGGACAACATTTGCAGCGTGGCACCTGATGTTAAACTTGATATTTAGACATTGAAGCAAACTGTCGAGCACCTTCTGATATCAATGTAGGAAACTCTGGGGCATTTGACCATTAAAAAAATTATTTAGAGATCTAAATATAGGCCTCAGGTTTCTTTAAGCCTTACTTTTCTGGTAGCTTGAGGCTGACTTTAATGAAATTCCATCTCTCTTCAGAGGCAATGCCTCTCTCACTGTTTATTAATACATCTATTACATCAGTGACGATGTTTAAGTAGACTAAAGAGAGCTATAGCCGGGGGCAAAATACCATACAAGAAATTAAACGCCACATTTAAACATTTCAAGTGTGTGTAAACTGCATTCAGTGATAACGGAAGAACAGCTGAATTCCACCCAAAAGGGCAAATCACAGAACCATAGAATGGCCTGGGTTGAAAAGGACCACAGTGACCACCTTGTTTCAGCCCCCTGCTATGTGCAGGGTCGCCAACCAGCAGCCCAGGCTGCCCAGAGCCACATCCAGCCTGGCCTCGAATGCCTGCAGGGATGGGGCATCCACAGCCTCCCTGGGCAACCTGTTCAGTGCGTCACCACCCATTTTCTACTATTGTTCATTGCCAGCTGCTAGGAAACTATCTTAATATTTGTTTCACGTGAAGTCCACAAAACCCAATAGAATTGAGGCCTCCCTCTCCCGTTTTTTAAACTCAGCATCCAAAACAGAGCAGCATTTCTCAGCTGTAGAGGGCTAACAGGCCATAACATTGAAGTAATAATGACTTTCAGACGCTATCCCATGAAACATTTAGTTTGCACAGGTATTAAGAAATCATAAGTGTTATAAGGAAGCAAATGCACACAGAGTGCTTAAAAAGTCAGGCTGACCTGGGTAAGTGATACGTATTGCTGCTTTTCTTTAAGCAAAGGAATATGAAACAAAGGCACCACTCAAAATACTCCAGCAGTCAAAATATGTAAGAAAACCTCACGTTAGATGCAAGGGCAGGTAACTGGAATGCAGTCAATGGTTGAGCCAATGCACCATTGGAAGCATACTGGTCCAGCAGTTCCTATGATGAACACGGTTGAATCACAGCTACAGGTACCAATGTTAATGGAGGTTGGTACCTGGTTTTTGTTTCTGTTTTTTCTTAAGACAGAAAGATCACTGTAGTTAAAACTTGGAGCAGTGCAGAGCTACCATAGGTCTATTTTCATTAATTTACAAGGGAATTAATTATTAATCATTTGCATGTGGTTTTGTACAGACTGCTTTCAAACTGCATTCATTTTCTAAGAGTTTCATCTTTCCAGGGAAAGTATTTCAGCCTGTGACTGCAGGACAAATAGAGCTGTGCGTAGTCCTGTACCAATGCAATTAGAATCTGGCTGAAGTAATTGCTAGAAGTGATTGTCGAGGATGAAGCCCTGGGCTGCAGCAGAGTTACAGACCTCCACGGGCAAGGCATCTCACAGTCACATTCTTTGAAAACCTGTGAGGGAATTTCATTGAAATGAACTTCATCTGGAACTCCCCTGCATCACTGCAGTCTGTAAAGAATTGTATCTGTTTTCTTGTTCTAGAGTCCCAGCAATTTCACACTTCCCCTGTTAGTTAGGTGATCTGTTCCCATGTTTTTATCTCATTTGTGCAGCATTCAGTGCCTGGATAAAATCTTAACACCTGTCCCTTGAGTGGGACTTCAAAGCATTCCCATGTGAAAAGCAAGCAGTGCATTACATCTGCATTACAACCACATTGCCACTGTACTGCATGGGCTTCTTCAGACGACATAGCAGAAAGACAGAGCGTGTGACATTGTCCTTGAGACAGCTGGAGTTCCTGCACATAATGCAGTGACCCTGACCAAAATAACATAAGCTGTGTATTTATAACATGCTCACACTTGTTATTTCACTTACAGATTTGTTTGGTGACTCTCTGAACGTGTTGTGGAAGCAGGGAGATATATATATATATAACTGTCATCAAAGGGTTGCTCGCTGCAGCCAAGCACTGAATATCAGACCTGTTGGTGATGCCCTTTGCAAGAAGCCTAGCTGGATTTTAAAGAATATGTTGGCTGGGTTCTACAGTATTAAATGAATATATATATATTATGAAAAATAATGTAATTTAAAAGGTCAAAATGAGTGAAAGTAGATGGCTAAGGTGAAATGGCACTGGGAGTGGTGTGGGTTGTTTAGAGGCTGTGAAATGACGTGGGATTACTTTCTGCCTAAGCAAGGAACTAAGTGGGATCTGTTGCTGGGCATGGGTGTAGTGGGACAGGTGAAGCATAGGACATCAGTTCACTCAGAATGGGTTCTCATTTGTTACAGACAACCTGATATGGTATGATGTAAAGAAAGTTCTATGTTGCTATGGAGGAAAGCAGATGAAGTGGTTTTGATTACGTGTTGTCCTAAGCAGCAGTGTGCATGGCCTTCGTAATATGATGTGGTCAGGTATGCAGAGGGAAGCCTGGTCTAACACTGACTGCATCTGCTTTGTACAGAGACACTCCTTGGGTCAGTAGAATACAGCTGCTTGGTGCAGGCTTCTGATTTCTGATGCTGTATTTTGCTTATTGATATCAACTCTTTTCAAAGACAAAGAATTCTGCAGAAAGGTGAGGCTCAGGTAGCACTTTGGGACTGTGGAGAATGAAGAGAGTAGAAAACCCCTTATCTCTTTGTTTGGGAGCATGACCTAGATTTCATTACCCGTGGCTGCATGGAGAGAGAAGAGCTTTTATATCCTTTTACTGTCTAATCCGACTCAAAACTCTTACAATACACTGGTTTGCATAGCAAGAAATACCCTGTAAGTGACTTGGTATGTTGCAGGTATTTTTCTACTTGTATTCTATGTACTGTGATGTTAGATGGAAGCATTGAGCAGCAGGAATAGTCCAGAACAGGGAAAGTAATTGTAAACAGCTCACCTGTGCAGTCTGTCCTTAGGCGTGCTGAGGGCAGGGCTCAGCTGCTCTGCAGACAGCAGTTCTCCTAACACTGTACCACTCATTAATGGTTTGCTCTGCAGTTGGTGTAGAAAACTGCTTTTTCTTCTACTTGCTGTAAGGGAATGGCATTTGAGGTGGTATATTCACTTGGACCTGGCTTTTCTGTCGAAACATGCAATGATCTTTTCCTATTAGCCAGGATCTTCCTCTCCAGGCCAATTTTCAGTAGCTTATACTCATTTTCTTGCTGTTTCTATGCAATAGCAGTAACTGCTTTTATTACTCTGATTTAAAGAGAACTTTTGTGCTTTTCTAAACTCTGCCAAAAAAAAAAACAAGACACAGGCCTTGTTGTCCAAGCCTGGTGCTTTTCACTTCTCCTTCATTTCTCATGGACTGAAACACGGAAAGGTAACCATCCCCATCCTCTTTGGTTTGTCTCTCCTATTTCCCCTTTGAGTTTCTATTCTGAGGACAATAAGGACGTGGTGCTGCCAACCCCAACTTCTCACAGAAGAGAGCTCTGTACATGGAGCCCTGTCACGAGCTGTGCGGTGCAGGAGTGTGTTCTTCCTCTTCCATCTGTGCAGGCACAGGCACACTCTGGGGCTCCAGTATGTCGGCCTGTCTGCAAGGCATGAGATAAATACGAGTACTGCAGGTTCCCCATTTCCAAAAGACTCGGAAGATGTCTGAAAGCAGGAGGATCCTCCACCTTCAAGGCCAGGGGGGTTCAGAGGGCTGCAGAGCACATTGCTGCACCATCTGCCGTGCTCCGGGCTCAGAGGAAGAACGTTGCTTGTGTTCAGGTGGCAGCCTGCCTAGAGGAAGCCGTTCAGCCTTGGGCAGGCTGACTGCTGTCCTGTTCTGCTGGCAGCTTTTGTTACGTTGTGGGAGAGAGGAGCATGAAAAGGGAGGCTAGCAGCAGAGCTGCAGGCAGATAGGCAGATAAGGCAGATAGAGAATGGCTTTTGGGAGCCAAAGTTTAGTAAGCTCATCATCATTACAGGGCCAGGTAAGTCAGGGTGATAAATGAATCCCTCCCTGACTTGGCTAAAGCTCCCTGTCACATCAGCATAACAGCTGGGCTGCATCCAGGTAAGCAGTCGGGTTTGCACCACTAGTGCTGGAAGCCCGGGGTTTGTAGTAAAACCTAATGCACTGTAGCAAATCAACCACAAGGAAAATGAAAATCGTAAAGCAGATGCACCCATCCCTTCTGCAGAGTGGCACAGTGTTGGTGCTTTGCTGGAGCTGTGCAATGGAAGCCTCCCATGCACTGCACACACAGCAATGCAGTCAAAAGCTGGGTCTGTAGCAGACAGAGAGCAATGTGAGTCCAATAAACCAGCAGCACTTCTCACCTCACTAATGCACATTTCTCATATTTCCCCTTTACATTCATATCCTCAGCAGCAGATAAAAGCTGTCTTGCTAACAGTGATACAGACCTGATTCCTTCAGTGTTTGTTCCATTCTAGCCCTATTTATATACTCTCCCTACTTTCCCTCTTGTAAATGAGGTAAATGGGGATATGCAGTGGGTTACGCTTTTACTCCCTGCTACCATATTATATTCCTCACCATTTTTTGAATCTGGACATTTTTGCTTTCACTATGAACAACGTGGCTCTAGGCATCCTTCAGCAGTGCAGCGAGGCATAATGTCTGCTAGTCGGCGTATCTGCTGAGAGTTGGAGAGGAAAGGTTGAAAGAGGTCAGAGTCAAACGAGCATCCATTAAACCTGAGTTGTCATTTTGACCAGAAGAAAAGGGCAGCTGTAGTTGTGTACTGGGGAAAAAAAAAATAATAAGGTGTAGAAGACACCGAAGTGCGGAAGGAAATTCAATATCCCAGTTGTCCCTTTTTGGAGTGAGAATGTGTGTTCAGAGGCATTAGTAGGGAAATGTTCCTGGGCCTCCAGGTGTAGATGCATCCTGAGTTCAGCAGTCATGCTTTGAATTCTCAGAATCACAGCCCCAGGTCACATCATAGAATCATAGAATGGCCTGGGTTGAAAAGGACCACAATGTTCATCCAGCTCCAACCCCTGCTATGTGCAGGGTCACCAACCAGCAGCCCAGGCTGCCCAGAGCCACATCCAGCCTGGCCTTGAATGCCTGCAGGGATGGGGCACCCACAGCCTCCTTGGGCAACCTGTTCAGTGCATCACCACCTTCTGGGGGAAAAACTTCCTTCTAATATCCAACCTAAACCTCCCCTGTCTCAGTTTAAAACCATCACCCGGAACATCACCTGGAAGAGTAAAAATGAAACAGCGTAATGGGGGGGTGCTCCACAGGGCTGTGGAATGGCTTTTGGATAGTGGCAAATTTTGTTCTTTTATTTCTCCTGAATTTCATACAAATTCCTGAGCCTAGAAATAACCCTTAAAACATTTTCCTCAGGCATTTGTTCTCTGTCCAGAGCAACAGATGGTTTCATCAATATTCCTCTGATTTGTTTCCCTCTCCTCTTCTTTGCAG
Seq C2 exon
GTCTCCATGAAATCCAGTGTTCCCTGCCTGTAGAAAATAGAAGAATCTTTCTGAATGAATTATCTGAGGTCAGCTTTAGTGAATGCAAATTTAGTTTGTCATTGACGGACCTTTTTATCATCATCTTCTCTGGAGTCGCAGTCTCCATTGCTGCAATTCTATCAAGCTTCTTCCTAGCAACTCTAGTGCACTGCTTCCAAAGATGTGCTCCCAGTAAAGATGACGATGATGATGAAGACGACAGTGAGGACTGA
VastDB Features
Vast-tools module Information
Secondary ID
ENSGALG00000004097:ENSGALT00000006520:4
Average complexity
IR
Mappability confidence:
NA
Protein Impact
Alternative protein isoforms
No structure available
Features
Disorder rate (Iupred):
C1=0.000 A=NA C2=0.107
Domain overlap (PFAM):
C1:
PF120783=DUF3557=WD(100=54.8),PF138551=LRR_8=WD(100=30.5),PF138551=LRR_8=WD(100=30.5)
A:
NA
C2:
NO
Main Inclusion Isoform:
NA
Other Inclusion Isoforms:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
No suggested primer sequences
R:
No suggested primer sequences
Band lengths:
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]