HsaEX0019755 @ hg19
Exon Skipping
Gene
ENSG00000151240 | DIP2C
Description
DIP2 disco-interacting protein 2 homolog C (Drosophila) [Source:HGNC Symbol;Acc:29150]
Coordinates
chr10:518379-735606:-
Coord C1 exon
chr10:735434-735606
Coord A exon
chr10:532399-532470
Coord C2 exon
chr10:518379-518489
Length
72 bp
Sequences
Splice sites
3' ss Seq
TCATTTTCCTTCTCTTGCAGGTG
3' ss Score
13.67
5' ss Seq
CGAGTAGGT
5' ss Score
5.76
Exon sequences
Seq C1 exon
CGGTGCGGTTCCGCCGGGCGCGAGGAGCCGCCGAGACCTCCGCCTGCGAACAAAGAGGAGGCCGTGCGGGGCGCGGCGCCCGCGGAGCATGGCGGACCGCAGCCTGGAGGGCATGGCGCTGCCCCTGGAGGTGCGGGCGCGCCTGGCCGAGCTGGAGCTGGAGCTGTCGGAAG
Seq A exon
GTGACATCACACAAAAAGGATATGAAAAGAAGAGGTCAAAGTTAATTGGAGCCTACCTTCCGCAGCCTCCGA
Seq C2 exon
GGGTGGACCAAGCTTTGCCGCAAGAACGCCGGGCTCCTGTCACTCCTTCCTCCGCCTCTCGCTACCACCGCCGACGGTCTTCAGGGTCACGAGATGAGCGCTATCGGTCAG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000151240-'0-6,'0-3,3-6
Average complexity
C1
Mappability confidence:
100%=100=100%
Protein Impact
Alternative protein isoforms (Ref)
No structure available
Features
Disorder rate (Iupred):
C1=0.095 A=0.744 C2=0.963
Domain overlap (PFAM):
C1:
PF064646=DMAP_binding=PU(19.3=75.9),PF051207=GvpG=PU(55.6=86.2)
A:
PF064646=DMAP_binding=FE(21.1=100),PF051207=GvpG=PD(42.2=76.0)
C2:
PF064646=DMAP_binding=FE(32.5=100)
Main Skipping Isoform:
NA
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Primers PCR
Suggestions for RT-PCR validation
F:
CGAACAAAGAGGAGGCCGTG
R:
CGGAGGAAGGAGTGACAGGAG
Band lengths:
181-253
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
- Pre-implantation embryo development
Other AS DBs:
FasterDB (Includes CLIP-seq data)
AS-ALPS (AS-induced ALteration of Protein Structure, links to PINs)
APPRIS (Selection of principal isoform)
DEU primates (Only for human)