HsaEX0073268 @ hg19

Exon Skipping

Gene

ENSG00000152454 | ZNF256

Description

zinc finger protein 256 [Source:HGNC Symbol;Acc:13049]

Coordinates

chr19:58452206-58459077:-

Coord C1 exon

chr19:58458810-58459077

Coord A exon

chr19:58455302-58455428

Coord C2 exon

chr19:58452206-58454015

Length

127 bp

Sequences

Splice sites

3' ss Seq

ATGTGTCCCCATCCTGGCAGGGC

3' ss Score

8.6

5' ss Seq

TGGGTAAGG

5' ss Score

9.08

Exon sequences

Seq C1 exon

GGCGGGACTTCCGTTGTCCTCCTTGTGGCGGTCGTTTTGGCATTTGTCTGGACTGATTACTTGGTAGAAAGCCCCGGAGCGCTGGGTCAGCATCATCCGTGACTGACTGAGAAGGCGCGAGAGGAGTCTTCCCCGCTGCACAGAGGCGTGGCTGAGGCTCGGCGGCGCCCAGGGTACCCAGGCCCGGCCCGGAATAAGGACATCCTCTCTGGCCCCGCTCCGCTCACAGAGTCAGATGGCGGCGGCCGAGCTGACGGCCCCGGCCCAG

Seq A exon

GGCATTGTGACCTTTGAGGACGTGGCTGTTTACTTCTCCTGGAAGGAGTGGGGTCTTCTTGATGAGGCTCAGAAATGCCTGTACCACGATGTGATGCTGGAGAACTTGACACTTACAACCTCCCTGG

Seq C2 exon

GTGGTTCTGGAGCAGGGGATGAGGAGGCACCTTATCAGCAGAGCACTTCTCCACAGCGGGTGTCACAGGTTAGGATTCCTAAGGCCCTTCCTTCTCCCCAGAAGACCAACCCCTGTGAGATATGTGGCCCAGTCTTGAGACAGATTTTGCACTTGGTTGAACACCAAGGAACACACCATGGTCAGAAACTGTATACAGACGGGGCATGTAGGAAACAATTACAATTTACTGCATACCTTCATCAGCACCAGAAGCAGCATGTTGGACAGAAACACTTCAGAAGCAATGGGGGCAGAGACATGTTTTTGAGCAGCTGCACATTTGAAGTATCTGGGAAGCCCTTCACTTGCAAGGAGGTTGGGAAGGATTTCCTGGTGAGATCAAGATTTCTTCAGCAACAGGCTGCTCACACCAGAAAGAAGTCAAACAGAACCAAGAGTGCAGTGGCCTTTCACAGTGTAAAAAATCATTACAACTGGGGAGAATGTGTGAAAGCTTTC

VastDB Features

Vast-tools module Information

Secondary ID

ENSG00000152454_CASSETTE1

Average complexity

S

Mappability confidence:

100%=100=100%

Protein Impact

ORF disruption upon sequence exclusion

Show structural model

Features

Disorder rate (Iupred):

C1=0.000 A=0.023 C2=0.108

Domain overlap (PFAM):

C1:

NO

A:

PF0135222=KRAB=WD(100=95.3)

C2:

PF0135222=KRAB=PD(0.1=0.0),PF134651=zf-H2C2_2=WD(100=5.2),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF0013017=C1_1=WD(100=9.0),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.3),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.5),PF134651=zf-H2C2_2=WD(100=4.3)

Main Inclusion Isoform:

ENSP00000282308