HsaEX0073347 @ hg38
Exon Skipping
Gene
ENSG00000170265 | ZNF282
Description
zinc finger protein 282 [Source:HGNC Symbol;Acc:HGNC:13076]
Coordinates
chr7:149198333-149210704:+
Coord C1 exon
chr7:149198333-149198752
Coord A exon
chr7:149206696-149206822
Coord C2 exon
chr7:149210585-149210704
Length
127 bp
Sequences
Splice sites
3' ss Seq
TTAACCGCTTGTTGGCTTAGGTT
3' ss Score
7.81
5' ss Seq
TGGGTAAGG
5' ss Score
9.08
Exon sequences
Seq C1 exon
GCTCAAGAATGGGACATGGACGCCCGGCGGCCAATGCCTTTTCAGTTCCCACCCTTTCCAGATAGGGCACCTGTCTTCCCCGACCGCATGATGCGAGAGCCCCAGTTGCCCACAGCAGAGATCTCACTCTGGACTGTGGTGGCTGCCATTCAGGCTGTGGAGAGGAAGGTGGATGCCCAGGCCAGCCAGCTGCTGAACCTGGAGGGGCGCACGGGGACAGCCGAGAAGAAGCTGGCCGACTGTGAAAAGACGGCCGTGGAATTTGGGAACCACATGGAGAGCAAGTGGGCCGTGCTGGGGACCCTGCTGCAGGAGTACGGGCTGCTGCAGAGGCGGCTGGAGAACTTGGAGAACTTGCTGCGCAACAGGAACTTCTGGGTCCTGCGGCTGCCCCCGGGCAGCAAGGGGGAGGCCCCCAAG
Seq A exon
GTTCCAGTGACTTTTGTCGACATTGCTGTGTACTTCTCCGAAGACGAGTGGAAGAACTTGGACGAATGGCAGAAGGAGCTTTATAACAACCTTGTTAAGGAGAACTACAAAACCCTCATGTCCCTGG
Seq C2 exon
GAGCAGAGCCCCTGGTGCCTGCGCAGGATGCGTCCTCCCAGGTGAAGCGTGAGGACACCCTGTGTGTCCGGGGTCAGCGGGGCCTGGAGGAAAGAGCCATCCCTACGGAATCCATTACCG
VastDB Features
Vast-tools module Information
Secondary ID
ENSG00000170265_MULTIEX1-2/8=C1-4
Average complexity
C3
Mappability confidence:
100%=100=100%
Protein Impact
ORF disruption upon sequence exclusion
No structure available
Features
Disorder rate (Iupred):
C1=0.279 A=0.047 C2=0.951
Domain overlap (PFAM):
C1:
PF124173=DUF3669=WD(100=57.1)
A:
PF0135222=KRAB=WD(100=95.3)
C2:
NO
Main Skipping Isoform:
ENST00000479907fB8098
Other Skipping Isoforms:
NA
Associated events
Other assemblies
Conservation
Zebrafish
(danRer10)
No conservation detected
Fruitfly
(dm6)
No conservation detected
Primers PCR
Suggestions for RT-PCR validation
F:
AACCACATGGAGAGCAAGTGG
R:
AGGGATGGCTCTTTCCTCCAG
Band lengths:
257-384
Functional annotations
There are 0 annotated functions for this event
GENOMIC CONTEXT[edit]
INCLUSION PATTERN[edit]
SPECIAL DATASETS
- Autistic and control brains
- Pre-implantation embryo development